RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
MUC1-229ENST00000620770 DAND5Q8N907 189 aa8.5□□□□□ -1.05
MUC1-229ENST00000620770 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
MUC1-229ENST00000620770 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
MUC1-229ENST00000620770 M0QXV9 152 aa8.48□□□□□ -1.05
MUC1-229ENST00000620770 SCGB1D4Q6XE38 83 aa8.48□□□□□ -1.05
MUC1-229ENST00000620770 PHF5AQ7RTV0 110 aaKnown RBP8.48□□□□□ -1.05
MUC1-229ENST00000620770 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
MUC1-229ENST00000620770 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
MUC1-229ENST00000620770 C7orf33Q8WU49 177 aa8.47□□□□□ -1.05
MUC1-229ENST00000620770 PAM16Q9Y3D7 125 aa8.47□□□□□ -1.05
MUC1-229ENST00000620770 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
MUC1-229ENST00000620770 NPC2P61916 151 aa8.46□□□□□ -1.06
MUC1-229ENST00000620770 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
MUC1-229ENST00000620770 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
MUC1-229ENST00000620770 SPATA45Q537H7 98 aa8.45□□□□□ -1.06
MUC1-229ENST00000620770 NKAPP1Q8N9T2 125 aa8.45□□□□□ -1.06
MUC1-229ENST00000620770 TP73-AS1Q9UF72 201 aa8.45□□□□□ -1.06
MUC1-229ENST00000620770 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
MUC1-229ENST00000620770 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
MUC1-229ENST00000620770 ADAMTSL4-AS1Q5T5F5 129 aa8.44□□□□□ -1.06
MUC1-229ENST00000620770 BOD1L2Q8IYS8 172 aa8.44□□□□□ -1.06
MUC1-229ENST00000620770 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
MUC1-229ENST00000620770 C22orf24Q9Y442 160 aa8.44□□□□□ -1.06
MUC1-229ENST00000620770 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
MUC1-229ENST00000620770 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
MUC1-229ENST00000620770 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
MUC1-229ENST00000620770 UBE2BP63146 152 aa8.43□□□□□ -1.06
MUC1-229ENST00000620770 Q8NDZ9 215 aa8.43□□□□□ -1.06
MUC1-229ENST00000620770 LITAFQ99732 161 aa8.43□□□□□ -1.06
MUC1-229ENST00000620770 HERC1Q15751 4861 aa8.42□□□□□ -1.06
MUC1-229ENST00000620770 TIMM17BO60830 172 aa8.42□□□□□ -1.06
MUC1-229ENST00000620770 VPREB1P12018 145 aa8.42□□□□□ -1.06
MUC1-229ENST00000620770 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
MUC1-229ENST00000620770 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
MUC1-229ENST00000620770 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
MUC1-229ENST00000620770 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
MUC1-229ENST00000620770 TMEM238C9JI98 176 aa8.41□□□□□ -1.06
MUC1-229ENST00000620770 NCR3O14931 201 aa8.41□□□□□ -1.06
MUC1-229ENST00000620770 C14orf144Q96I85 54 aa8.41□□□□□ -1.06
MUC1-229ENST00000620770 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
MUC1-229ENST00000620770 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
MUC1-229ENST00000620770 SOSTDC1Q6X4U4 206 aa8.4□□□□□ -1.06
MUC1-229ENST00000620770 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
MUC1-229ENST00000620770 EIF4EBP3O60516 100 aaPredicted RBP8.39□□□□□ -1.07
MUC1-229ENST00000620770 COX8AP10176 69 aa8.39□□□□□ -1.07
MUC1-229ENST00000620770 PRR3P79522 188 aaKnown RBP8.39□□□□□ -1.07
MUC1-229ENST00000620770 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
MUC1-229ENST00000620770 LINC00167Q96N53 147 aa8.39□□□□□ -1.07
MUC1-229ENST00000620770 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
MUC1-229ENST00000620770 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
MUC1-229ENST00000620770 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
MUC1-229ENST00000620770 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
MUC1-229ENST00000620770 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
MUC1-229ENST00000620770 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
MUC1-229ENST00000620770 J3QL48 77 aa8.36□□□□□ -1.07
MUC1-229ENST00000620770 C1orf137Q5JT78 98 aa8.36□□□□□ -1.07
MUC1-229ENST00000620770 LOC107984156A0A0G2JMH3 177 aa8.35□□□□□ -1.07
MUC1-229ENST00000620770 M0R378 163 aa8.35□□□□□ -1.07
MUC1-229ENST00000620770 S100A12P80511 92 aa8.35□□□□□ -1.07
MUC1-229ENST00000620770 SRSF9Q13242 221 aaKnown RBP eCLIP8.35□□□□□ -1.07
MUC1-229ENST00000620770 SLC25A34Q6PIV7 304 aa8.35□□□□□ -1.07
MUC1-229ENST00000620770 ARL17AQ8IVW1 177 aa8.35□□□□□ -1.07
MUC1-229ENST00000620770 LOC105371267A0A1B0GV96 52 aa8.34□□□□□ -1.07
MUC1-229ENST00000620770 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
MUC1-229ENST00000620770 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
MUC1-229ENST00000620770 DLEU1O43261 78 aa8.33□□□□□ -1.08
MUC1-229ENST00000620770 MUSTN1Q8IVN3 82 aa8.33□□□□□ -1.08
MUC1-229ENST00000620770 NDUFC2O95298 119 aa8.32□□□□□ -1.08
MUC1-229ENST00000620770 SMIM6P0DI80 62 aa8.32□□□□□ -1.08
MUC1-229ENST00000620770 IFITM1P13164 125 aa8.32□□□□□ -1.08
MUC1-229ENST00000620770 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
MUC1-229ENST00000620770 Q6ZVH6 145 aa8.32□□□□□ -1.08
MUC1-229ENST00000620770 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
MUC1-229ENST00000620770 IGLV1-50A0A075B6I6 118 aa8.31□□□□□ -1.08
MUC1-229ENST00000620770 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
MUC1-229ENST00000620770 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
MUC1-229ENST00000620770 HIST1H4GQ99525 98 aa8.31□□□□□ -1.08
MUC1-229ENST00000620770 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
MUC1-229ENST00000620770 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
MUC1-229ENST00000620770 DDTP30046 118 aa8.3□□□□□ -1.08
MUC1-229ENST00000620770 C2orf91Q6ZV80 131 aa8.3□□□□□ -1.08
MUC1-229ENST00000620770 OR13C6PQ8NH95 151 aa8.3□□□□□ -1.08
MUC1-229ENST00000620770 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
MUC1-229ENST00000620770 BCE1O60756 84 aa8.28□□□□□ -1.08
MUC1-229ENST00000620770 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
MUC1-229ENST00000620770 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
MUC1-229ENST00000620770 PRO1933Q9H354 126 aa8.28□□□□□ -1.08
MUC1-229ENST00000620770 HIGD1BQ9P298 99 aa8.28□□□□□ -1.08
MUC1-229ENST00000620770 PRYO14603 147 aa8.27□□□□□ -1.09
MUC1-229ENST00000620770 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
MUC1-229ENST00000620770 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
MUC1-229ENST00000620770 UBE2AP49459 152 aa8.26□□□□□ -1.09
MUC1-229ENST00000620770 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
MUC1-229ENST00000620770 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
MUC1-229ENST00000620770 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
MUC1-229ENST00000620770 C12orf57Q99622 126 aa8.26□□□□□ -1.09
MUC1-229ENST00000620770 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
MUC1-229ENST00000620770 A4D1N5 150 aa8.25□□□□□ -1.09
MUC1-229ENST00000620770 IGLV6-57P01721 117 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 352 ms