RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 LINC01546A6NGU7 62 aa10.73□□□□□ -0.69
COL5A1-208ENST00000618395 JMJD1CQ15652 2540 aa10.72□□□□□ -0.69
COL5A1-208ENST00000618395 CRIP3Q6Q6R5 217 aa10.72□□□□□ -0.69
COL5A1-208ENST00000618395 LINC01600Q96MT4 127 aa10.72□□□□□ -0.69
COL5A1-208ENST00000618395 COA5Q86WW8 74 aa10.72□□□□□ -0.69
COL5A1-208ENST00000618395 IGFL2Q6UWQ7 119 aa10.71□□□□□ -0.69
COL5A1-208ENST00000618395 PIP4P1Q86T03 277 aa10.71□□□□□ -0.7
COL5A1-208ENST00000618395 ELOF1P60002 83 aaKnown RBP10.71□□□□□ -0.7
COL5A1-208ENST00000618395 MIR22HGQ0VDD5 57 aa10.7□□□□□ -0.7
COL5A1-208ENST00000618395 NAV2Q8IVL1 2488 aa10.7□□□□□ -0.7
COL5A1-208ENST00000618395 DAZAP2Q15038 168 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-208ENST00000618395 NHLRC4P0CG21 123 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-208ENST00000618395 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
COL5A1-208ENST00000618395 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
COL5A1-208ENST00000618395 USP24Q9UPU5 2620 aa10.68□□□□□ -0.7
COL5A1-208ENST00000618395 IGF2-ASQ6U949 168 aa10.68□□□□□ -0.7
COL5A1-208ENST00000618395 C2orf48Q96LS8 159 aa10.67□□□□□ -0.7
COL5A1-208ENST00000618395 SMCR5Q8TEV8 140 aa10.67□□□□□ -0.7
COL5A1-208ENST00000618395 KIAA0087Q14695 138 aa10.66□□□□□ -0.7
COL5A1-208ENST00000618395 C6orf223Q8N319 242 aa10.65□□□□□ -0.7
COL5A1-208ENST00000618395 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
COL5A1-208ENST00000618395 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
COL5A1-208ENST00000618395 COL4A4P53420 1690 aaPredicted RBP10.64□□□□□ -0.71
COL5A1-208ENST00000618395 LUZP6Q538Z0 58 aa10.64□□□□□ -0.71
COL5A1-208ENST00000618395 FAM218AQ96MZ4 157 aa10.64□□□□□ -0.71
COL5A1-208ENST00000618395 ADORA2A-AS1P86434 159 aa10.63□□□□□ -0.71
COL5A1-208ENST00000618395 H7BZZ5 65 aa10.62□□□□□ -0.71
COL5A1-208ENST00000618395 UTRNP46939 3433 aa10.61□□□□□ -0.71
COL5A1-208ENST00000618395 Q8N2B8 174 aa10.61□□□□□ -0.71
COL5A1-208ENST00000618395 LINC01554Q52M75 96 aa10.6□□□□□ -0.71
COL5A1-208ENST00000618395 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
COL5A1-208ENST00000618395 MTORP42345 2549 aa10.59□□□□□ -0.71
COL5A1-208ENST00000618395 RBM12B-AS1Q9P1G2 102 aa10.59□□□□□ -0.71
COL5A1-208ENST00000618395 LINC01006Q8NI28 216 aa10.59□□□□□ -0.71
COL5A1-208ENST00000618395 Q6YL49 198 aa10.58□□□□□ -0.72
COL5A1-208ENST00000618395 FHL3Q13643 280 aa10.58□□□□□ -0.72
COL5A1-208ENST00000618395 CDC42SE1Q9NRR8 79 aa10.58□□□□□ -0.72
COL5A1-208ENST00000618395 C19orf84I3L1E1 186 aa10.57□□□□□ -0.72
COL5A1-208ENST00000618395 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
COL5A1-208ENST00000618395 Q8NBF4 154 aa10.56□□□□□ -0.72
COL5A1-208ENST00000618395 TRBV7-4A0A0J9YYF1 115 aa10.53□□□□□ -0.72
COL5A1-208ENST00000618395 LINC01556Q5JQF7 62 aa10.53□□□□□ -0.72
COL5A1-208ENST00000618395 LMO4P61968 165 aa10.52□□□□□ -0.73
COL5A1-208ENST00000618395 MOBPQ13875 183 aa10.51□□□□□ -0.73
COL5A1-208ENST00000618395 MUC22E2RYF6 1773 aaPredicted RBP10.51□□□□□ -0.73
COL5A1-208ENST00000618395 AKAP13Q12802 2813 aa10.5□□□□□ -0.73
COL5A1-208ENST00000618395 Q1T7F1 81 aa10.5□□□□□ -0.73
COL5A1-208ENST00000618395 LINC00313P59037 77 aa10.49□□□□□ -0.73
COL5A1-208ENST00000618395 CHD8Q9HCK8 2581 aa10.48□□□□□ -0.73
COL5A1-208ENST00000618395 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
COL5A1-208ENST00000618395 LINC00476Q8WZB0 136 aa10.47□□□□□ -0.73
COL5A1-208ENST00000618395 IGLV1-40P01703 118 aa10.46□□□□□ -0.73
COL5A1-208ENST00000618395 Q6ZSN1 163 aa10.46□□□□□ -0.74
COL5A1-208ENST00000618395 A8MWP4 228 aa10.45□□□□□ -0.74
COL5A1-208ENST00000618395 CEP295Q9C0D2 2601 aa10.45□□□□□ -0.74
COL5A1-208ENST00000618395 K7EQZ3 153 aa10.44□□□□□ -0.74
COL5A1-208ENST00000618395 CDSNQ15517 529 aa10.44□□□□□ -0.74
COL5A1-208ENST00000618395 IGHV3OR16-9A0A0B4J2B5 98 aa10.44□□□□□ -0.74
COL5A1-208ENST00000618395 C10orf99Q6UWK7 81 aa10.44□□□□□ -0.74
COL5A1-208ENST00000618395 Q6ZRU5 148 aa10.44□□□□□ -0.74
COL5A1-208ENST00000618395 APLNQ9ULZ1 77 aa10.44□□□□□ -0.74
COL5A1-208ENST00000618395 C22orf24Q9Y442 160 aa10.43□□□□□ -0.74
COL5A1-208ENST00000618395 EPM2AB3EWF7 344 aa10.43□□□□□ -0.74
COL5A1-208ENST00000618395 C5orf42Q9H799 3197 aa10.43□□□□□ -0.74
COL5A1-208ENST00000618395 M0R2N4 97 aa10.43□□□□□ -0.74
COL5A1-208ENST00000618395 CEP350Q5VT06 3117 aa10.42□□□□□ -0.74
COL5A1-208ENST00000618395 SPANXA2-OT1Q8N9U9 137 aa10.42□□□□□ -0.74
COL5A1-208ENST00000618395 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
COL5A1-208ENST00000618395 KIF25-AS1Q9Y6Z4 181 aa10.41□□□□□ -0.74
COL5A1-208ENST00000618395 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
COL5A1-208ENST00000618395 LYPD5Q6UWN5 251 aa10.4□□□□□ -0.74
COL5A1-208ENST00000618395 C9orf129Q5T035 196 aaKnown RBP10.4□□□□□ -0.75
COL5A1-208ENST00000618395 Q6ZRX8 168 aa10.39□□□□□ -0.75
COL5A1-208ENST00000618395 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
COL5A1-208ENST00000618395 LY6G6CO95867 125 aa10.39□□□□□ -0.75
COL5A1-208ENST00000618395 AVPP01185 164 aa10.37□□□□□ -0.75
COL5A1-208ENST00000618395 IGLV5-52A0A0A0MRZ9 124 aa10.37□□□□□ -0.75
COL5A1-208ENST00000618395 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
COL5A1-208ENST00000618395 A0A0A0MQY5 61 aa10.36□□□□□ -0.75
COL5A1-208ENST00000618395 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
COL5A1-208ENST00000618395 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
COL5A1-208ENST00000618395 Q8NA96 180 aa10.35□□□□□ -0.75
COL5A1-208ENST00000618395 ODF3L2Q3SX64 289 aa10.33□□□□□ -0.76
COL5A1-208ENST00000618395 MRPL34Q9BQ48 92 aaKnown RBP10.33□□□□□ -0.76
COL5A1-208ENST00000618395 SPACA4Q8TDM5 124 aa10.33□□□□□ -0.76
COL5A1-208ENST00000618395 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
COL5A1-208ENST00000618395 FASNP49327 2511 aaKnown RBP10.33□□□□□ -0.76
COL5A1-208ENST00000618395 PRO3102Q9H379 93 aa10.31□□□□□ -0.76
COL5A1-208ENST00000618395 A0A0C4DFX4 3053 aa10.31□□□□□ -0.76
COL5A1-208ENST00000618395 CFAP54Q96N23 3096 aa10.3□□□□□ -0.76
COL5A1-208ENST00000618395 IGLV6-57P01721 117 aa10.29□□□□□ -0.76
COL5A1-208ENST00000618395 C11orf71Q6IPW1 123 aa10.29□□□□□ -0.76
COL5A1-208ENST00000618395 Q75L30 129 aa10.28□□□□□ -0.76
COL5A1-208ENST00000618395 C1orf134Q5TEV5 83 aa10.28□□□□□ -0.76
COL5A1-208ENST00000618395 LITAFQ99732 161 aa10.28□□□□□ -0.76
COL5A1-208ENST00000618395 LY6G6DO95868 133 aa10.27□□□□□ -0.77
COL5A1-208ENST00000618395 BRI3O95415 125 aa10.25□□□□□ -0.77
COL5A1-208ENST00000618395 LINC00315P59091 139 aa10.24□□□□□ -0.77
COL5A1-208ENST00000618395 A0A1W2PNU3 283 aaPredicted RBP10.24□□□□□ -0.77
COL5A1-208ENST00000618395 Q5XG85 94 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms