RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 INAFM2P0DMQ5 153 aa10.2□□□□□ -0.78
TNFRSF11A-206ENST00000617039 LITAFQ99732 161 aa10.19□□□□□ -0.78
TNFRSF11A-206ENST00000617039 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
TNFRSF11A-206ENST00000617039 DSCR8Q96T75 97 aa10.18□□□□□ -0.78
TNFRSF11A-206ENST00000617039 FUSP35637 526 aaKnown RBP eCLIP10.18□□□□□ -0.78
TNFRSF11A-206ENST00000617039 Q8NAQ8 132 aa10.18□□□□□ -0.78
TNFRSF11A-206ENST00000617039 CITED1Q99966 193 aa10.18□□□□□ -0.78
TNFRSF11A-206ENST00000617039 TRBV10-3A0A0K0K1G6 114 aa10.17□□□□□ -0.78
TNFRSF11A-206ENST00000617039 PRO0461Q9UI25 63 aa10.17□□□□□ -0.78
TNFRSF11A-206ENST00000617039 H3BT86 120 aa10.17□□□□□ -0.78
TNFRSF11A-206ENST00000617039 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
TNFRSF11A-206ENST00000617039 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
TNFRSF11A-206ENST00000617039 CXCL5P42830 114 aa10.17□□□□□ -0.78
TNFRSF11A-206ENST00000617039 H0YGX0 51 aa10.16□□□□□ -0.78
TNFRSF11A-206ENST00000617039 A0A087WVE0 104 aa10.16□□□□□ -0.78
TNFRSF11A-206ENST00000617039 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11A-206ENST00000617039 ETDCA0A1B0GVM5 59 aa10.15□□□□□ -0.78
TNFRSF11A-206ENST00000617039 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
TNFRSF11A-206ENST00000617039 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.79
TNFRSF11A-206ENST00000617039 C3orf84H3BNL1 204 aa10.15□□□□□ -0.79
TNFRSF11A-206ENST00000617039 Q6ZRU5 148 aa10.15□□□□□ -0.79
TNFRSF11A-206ENST00000617039 DIRC1Q969H9 104 aa10.15□□□□□ -0.79
TNFRSF11A-206ENST00000617039 TRACP01848 142 aa10.14□□□□□ -0.79
TNFRSF11A-206ENST00000617039 Q8IZM0 81 aa10.13□□□□□ -0.79
TNFRSF11A-206ENST00000617039 UBL5Q9BZL1 73 aa10.13□□□□□ -0.79
TNFRSF11A-206ENST00000617039 hADV29S1A0JD25 119 aa10.13□□□□□ -0.79
TNFRSF11A-206ENST00000617039 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
TNFRSF11A-206ENST00000617039 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
TNFRSF11A-206ENST00000617039 TIMM17BO60830 172 aa10.11□□□□□ -0.79
TNFRSF11A-206ENST00000617039 TGP01266 2768 aa10.11□□□□□ -0.79
TNFRSF11A-206ENST00000617039 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11A-206ENST00000617039 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
TNFRSF11A-206ENST00000617039 ENHOQ6UWT2 76 aa10.1□□□□□ -0.79
TNFRSF11A-206ENST00000617039 COX7BP24311 80 aa10.09□□□□□ -0.79
TNFRSF11A-206ENST00000617039 C3orf22Q8N5N4 141 aa10.09□□□□□ -0.79
TNFRSF11A-206ENST00000617039 A0A1B0GX51 115 aa10.08□□□□□ -0.8
TNFRSF11A-206ENST00000617039 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
TNFRSF11A-206ENST00000617039 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
TNFRSF11A-206ENST00000617039 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
TNFRSF11A-206ENST00000617039 IGLV5-45A0A087WSX0 123 aa10.06□□□□□ -0.8
TNFRSF11A-206ENST00000617039 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
TNFRSF11A-206ENST00000617039 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
TNFRSF11A-206ENST00000617039 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF11A-206ENST00000617039 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
TNFRSF11A-206ENST00000617039 CCDC179H3BU77 68 aa10.04□□□□□ -0.8
TNFRSF11A-206ENST00000617039 ZNF73O43830 326 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF11A-206ENST00000617039 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
TNFRSF11A-206ENST00000617039 F8WEM9 126 aa10.03□□□□□ -0.8
TNFRSF11A-206ENST00000617039 IL17DQ8TAD2 202 aa10.03□□□□□ -0.8
TNFRSF11A-206ENST00000617039 TMEM256-PLSCR3K7ERE1 68 aa10.03□□□□□ -0.8
TNFRSF11A-206ENST00000617039 RPL28P46779 137 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11A-206ENST00000617039 DEFB116Q30KQ4 102 aa10.03□□□□□ -0.8
TNFRSF11A-206ENST00000617039 CASC10Q5T4H9 136 aa10.03□□□□□ -0.8
TNFRSF11A-206ENST00000617039 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
TNFRSF11A-206ENST00000617039 FAM168BA1KXE4 195 aa10.01□□□□□ -0.81
TNFRSF11A-206ENST00000617039 RMI2Q96E14 147 aa10.01□□□□□ -0.81
TNFRSF11A-206ENST00000617039 CCKP06307 115 aa10.01□□□□□ -0.81
TNFRSF11A-206ENST00000617039 Q8N814 137 aa10.01□□□□□ -0.81
TNFRSF11A-206ENST00000617039 Q8N9L7 120 aa10□□□□□ -0.81
TNFRSF11A-206ENST00000617039 LINC00846Q9NV44 126 aa10□□□□□ -0.81
TNFRSF11A-206ENST00000617039 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
TNFRSF11A-206ENST00000617039 MDFIQ99750 246 aa10□□□□□ -0.81
TNFRSF11A-206ENST00000617039 SMIM20Q8N5G0 67 aa9.99□□□□□ -0.81
TNFRSF11A-206ENST00000617039 LY6G6CO95867 125 aa9.99□□□□□ -0.81
TNFRSF11A-206ENST00000617039 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF11A-206ENST00000617039 PRLHP81277 87 aa9.98□□□□□ -0.81
TNFRSF11A-206ENST00000617039 A0A0G2JQZ4 141 aa9.98□□□□□ -0.81
TNFRSF11A-206ENST00000617039 A0A1W2PNN7 141 aa9.98□□□□□ -0.81
TNFRSF11A-206ENST00000617039 CHTF8P0CG12 524 aa9.98□□□□□ -0.81
TNFRSF11A-206ENST00000617039 NREPQ16612 68 aa9.97□□□□□ -0.81
TNFRSF11A-206ENST00000617039 LINC00588Q9Y4M8 146 aa9.97□□□□□ -0.81
TNFRSF11A-206ENST00000617039 UBE2AP49459 152 aa9.97□□□□□ -0.81
TNFRSF11A-206ENST00000617039 K7EIL1 84 aa9.96□□□□□ -0.81
TNFRSF11A-206ENST00000617039 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
TNFRSF11A-206ENST00000617039 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
TNFRSF11A-206ENST00000617039 Q6ZRP5 223 aa9.94□□□□□ -0.82
TNFRSF11A-206ENST00000617039 KIAA0087Q14695 138 aa9.94□□□□□ -0.82
TNFRSF11A-206ENST00000617039 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
TNFRSF11A-206ENST00000617039 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
TNFRSF11A-206ENST00000617039 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
TNFRSF11A-206ENST00000617039 GHRHP01286 108 aa9.92□□□□□ -0.82
TNFRSF11A-206ENST00000617039 M0R378 163 aa9.91□□□□□ -0.82
TNFRSF11A-206ENST00000617039 ACYP1P07311 99 aa9.91□□□□□ -0.82
TNFRSF11A-206ENST00000617039 Q8NDZ9 215 aa9.9□□□□□ -0.82
TNFRSF11A-206ENST00000617039 SNURFQ9Y675 71 aa9.9□□□□□ -0.82
TNFRSF11A-206ENST00000617039 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.83
TNFRSF11A-206ENST00000617039 DNAH10OSP0CZ25 163 aa9.9□□□□□ -0.83
TNFRSF11A-206ENST00000617039 EGFEM1PQ0D2K5 195 aa9.9□□□□□ -0.83
TNFRSF11A-206ENST00000617039 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
TNFRSF11A-206ENST00000617039 COX17Q14061 63 aa9.89□□□□□ -0.83
TNFRSF11A-206ENST00000617039 M0QXV9 152 aa9.89□□□□□ -0.83
TNFRSF11A-206ENST00000617039 ST20-AS1Q8NBB2 130 aa9.88□□□□□ -0.83
TNFRSF11A-206ENST00000617039 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
TNFRSF11A-206ENST00000617039 SMCR5Q8TEV8 140 aa9.88□□□□□ -0.83
TNFRSF11A-206ENST00000617039 PRR4Q16378 134 aa9.87□□□□□ -0.83
TNFRSF11A-206ENST00000617039 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
TNFRSF11A-206ENST00000617039 C7orf33Q8WU49 177 aa9.87□□□□□ -0.83
TNFRSF11A-206ENST00000617039 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
TNFRSF11A-206ENST00000617039 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
TNFRSF11A-206ENST00000617039 BPY2O14599 106 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms