RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
TTC28-208ENST00000612946 TRBV7-4A0A0J9YYF1 115 aa6.22□□□□□ -1.41
TTC28-208ENST00000612946 TRAV10A0A0B4J240 114 aa6.21□□□□□ -1.41
TTC28-208ENST00000612946 LY6G6DO95868 133 aa6.21□□□□□ -1.41
TTC28-208ENST00000612946 PROK1P58294 105 aa6.21□□□□□ -1.41
TTC28-208ENST00000612946 MSMPQ1L6U9 139 aa6.21□□□□□ -1.41
TTC28-208ENST00000612946 A0A087WSZ3 146 aa6.21□□□□□ -1.42
TTC28-208ENST00000612946 UNQ6190/PRO20217Q6UXQ8 127 aa6.21□□□□□ -1.42
TTC28-208ENST00000612946 SMCR5Q8TEV8 140 aa6.2□□□□□ -1.42
TTC28-208ENST00000612946 COL4A2P08572 1712 aa6.2□□□□□ -1.42
TTC28-208ENST00000612946 FHL3Q13643 280 aa6.19□□□□□ -1.42
TTC28-208ENST00000612946 IGHV4-30-4P0DP06 118 aa6.19□□□□□ -1.42
TTC28-208ENST00000612946 IGHV4-31P0DP07 118 aa6.19□□□□□ -1.42
TTC28-208ENST00000612946 DEFB131BA0A096LNP1 70 aa6.19□□□□□ -1.42
TTC28-208ENST00000612946 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
TTC28-208ENST00000612946 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
TTC28-208ENST00000612946 BBC3Q96PG8 261 aaPredicted RBP6.18□□□□□ -1.42
TTC28-208ENST00000612946 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
TTC28-208ENST00000612946 COA5Q86WW8 74 aa6.18□□□□□ -1.42
TTC28-208ENST00000612946 FAM218AQ96MZ4 157 aa6.18□□□□□ -1.42
TTC28-208ENST00000612946 PLA2G5P39877 138 aa6.17□□□□□ -1.42
TTC28-208ENST00000612946 MGAM2Q2M2H8 2515 aa6.17□□□□□ -1.42
TTC28-208ENST00000612946 WISP2O76076 250 aa6.17□□□□□ -1.42
TTC28-208ENST00000612946 MDFIQ99750 246 aa6.17□□□□□ -1.42
TTC28-208ENST00000612946 EDN2P20800 178 aa6.16□□□□□ -1.42
TTC28-208ENST00000612946 A0A096LNI7 61 aa6.16□□□□□ -1.42
TTC28-208ENST00000612946 IGLV9-49A0A0B4J1Y8 123 aa6.16□□□□□ -1.42
TTC28-208ENST00000612946 CENPEQ02224 2701 aa6.15□□□□□ -1.43
TTC28-208ENST00000612946 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.14□□□□□ -1.43
TTC28-208ENST00000612946 DEFB4AO15263 64 aa6.14□□□□□ -1.43
TTC28-208ENST00000612946 A8MUN3 132 aa6.14□□□□□ -1.43
TTC28-208ENST00000612946 LITAFQ99732 161 aa6.14□□□□□ -1.43
TTC28-208ENST00000612946 GVQW2A0A096LPI5 108 aaPredicted RBP6.14□□□□□ -1.43
TTC28-208ENST00000612946 A8MWP4 228 aa6.14□□□□□ -1.43
TTC28-208ENST00000612946 PRR3P79522 188 aaKnown RBP6.14□□□□□ -1.43
TTC28-208ENST00000612946 Q6ZRX8 168 aa6.14□□□□□ -1.43
TTC28-208ENST00000612946 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
TTC28-208ENST00000612946 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
TTC28-208ENST00000612946 C11orf71Q6IPW1 123 aa6.13□□□□□ -1.43
TTC28-208ENST00000612946 GRNP28799 593 aaKnown RBP6.12□□□□□ -1.43
TTC28-208ENST00000612946 ADORA2A-AS1P86434 159 aa6.12□□□□□ -1.43
TTC28-208ENST00000612946 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
TTC28-208ENST00000612946 LINC00315P59091 139 aa6.12□□□□□ -1.43
TTC28-208ENST00000612946 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
TTC28-208ENST00000612946 KIAA0087Q14695 138 aa6.11□□□□□ -1.43
TTC28-208ENST00000612946 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
TTC28-208ENST00000612946 Q75L30 129 aa6.11□□□□□ -1.43
TTC28-208ENST00000612946 OBSCN-AS1Q96MR7 158 aa6.11□□□□□ -1.43
TTC28-208ENST00000612946 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
TTC28-208ENST00000612946 Q6ZRU5 148 aa6.1□□□□□ -1.43
TTC28-208ENST00000612946 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
TTC28-208ENST00000612946 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
TTC28-208ENST00000612946 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
TTC28-208ENST00000612946 STAB1Q9NY15 2570 aa6.08□□□□□ -1.44
TTC28-208ENST00000612946 Q9UF83 564 aa6.08□□□□□ -1.44
TTC28-208ENST00000612946 LINC01006Q8NI28 216 aa6.08□□□□□ -1.44
TTC28-208ENST00000612946 ODF3L2Q3SX64 289 aa6.07□□□□□ -1.44
TTC28-208ENST00000612946 AVPP01185 164 aa6.07□□□□□ -1.44
TTC28-208ENST00000612946 CFAP46Q8IYW2 2715 aa6.07□□□□□ -1.44
TTC28-208ENST00000612946 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
TTC28-208ENST00000612946 Q6ZRP5 223 aa6.06□□□□□ -1.44
TTC28-208ENST00000612946 H3BS24 57 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 IGLV1-51P01701 117 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 PRLHP81277 87 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 KLK9Q2XQG4 91 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 SPINK1P00995 79 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 H3BNG1 76 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 CIRBP-AS1Q8TBR5 109 aa6.05□□□□□ -1.44
TTC28-208ENST00000612946 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 FSHBP01225 129 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 HELZ2Q9BYK8 2649 aaKnown RBP6.04□□□□□ -1.44
TTC28-208ENST00000612946 Q6ZSN1 163 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 A8MTW9 85 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 C19orf84I3L1E1 186 aa6.04□□□□□ -1.44
TTC28-208ENST00000612946 Q8NA96 180 aa6.02□□□□□ -1.45
TTC28-208ENST00000612946 LINC01556Q5JQF7 62 aa6.02□□□□□ -1.45
TTC28-208ENST00000612946 Q5XG85 94 aa6.02□□□□□ -1.45
TTC28-208ENST00000612946 NBEAL1Q6ZS30 2694 aa6.02□□□□□ -1.45
TTC28-208ENST00000612946 FLNAP21333 2647 aaKnown RBP6.01□□□□□ -1.45
TTC28-208ENST00000612946 NUPR2A6NF83 97 aa6.01□□□□□ -1.45
TTC28-208ENST00000612946 X6R8D5 127 aa6.01□□□□□ -1.45
TTC28-208ENST00000612946 LY6G6CO95867 125 aa6.01□□□□□ -1.45
TTC28-208ENST00000612946 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
TTC28-208ENST00000612946 C22orf24Q9Y442 160 aa6□□□□□ -1.45
TTC28-208ENST00000612946 K7EQZ3 153 aa6□□□□□ -1.45
TTC28-208ENST00000612946 DMAC1Q96GE9 116 aa6□□□□□ -1.45
TTC28-208ENST00000612946 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
TTC28-208ENST00000612946 M0R2N4 97 aa5.99□□□□□ -1.45
TTC28-208ENST00000612946 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
TTC28-208ENST00000612946 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
TTC28-208ENST00000612946 DEFB116Q30KQ4 102 aa5.98□□□□□ -1.45
TTC28-208ENST00000612946 OCR1Q9BZK8 76 aa5.98□□□□□ -1.45
TTC28-208ENST00000612946 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
TTC28-208ENST00000612946 LINC00313P59037 77 aa5.98□□□□□ -1.45
TTC28-208ENST00000612946 PLA2G2AP14555 144 aa5.98□□□□□ -1.45
TTC28-208ENST00000612946 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms