RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	FAM218A	Q96MZ4	157 aa		11.4	□□□□□ -0.58
RDH13-223	ENST00000610356	DNAH9	Q9NYC9	4486 aa		11.4	□□□□□ -0.58
RDH13-223	ENST00000610356	BAALC-AS2	P0C853	105 aa		11.39	□□□□□ -0.59
RDH13-223	ENST00000610356	ZNF561-AS1	K7EIQ3	104 aa		11.39	□□□□□ -0.59
RDH13-223	ENST00000610356	MUC7	Q8TAX7	377 aa		11.39	□□□□□ -0.59
RDH13-223	ENST00000610356	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.38	□□□□□ -0.59
RDH13-223	ENST00000610356	UPK3B	Q9BT76	320 aa		11.38	□□□□□ -0.59
RDH13-223	ENST00000610356	C22orf24	Q9Y442	160 aa		11.38	□□□□□ -0.59
RDH13-223	ENST00000610356		Q9HAA7	133 aa		11.37	□□□□□ -0.59
RDH13-223	ENST00000610356		H0YGX0	51 aa		11.37	□□□□□ -0.59
RDH13-223	ENST00000610356	HIGD2B	Q4VC39	106 aa		11.37	□□□□□ -0.59
RDH13-223	ENST00000610356	C15orf56	Q8N910	161 aa		11.36	□□□□□ -0.59
RDH13-223	ENST00000610356	NHLRC4	P0CG21	123 aa	Predicted RBP	11.35	□□□□□ -0.59
RDH13-223	ENST00000610356	SMIM11B	Q8TCY0	68 aa		11.35	□□□□□ -0.59
RDH13-223	ENST00000610356	ANAPC13	Q9BS18	74 aa		11.35	□□□□□ -0.59
RDH13-223	ENST00000610356	NDUFC2	O95298	119 aa		11.35	□□□□□ -0.59
RDH13-223	ENST00000610356	CAMK2N2	Q96S95	79 aa		11.35	□□□□□ -0.59
RDH13-223	ENST00000610356	C6orf48	Q9UBA6	75 aa		11.34	□□□□□ -0.59
RDH13-223	ENST00000610356	NDUFV3	P56181	108 aa	Known RBP	11.33	□□□□□ -0.6
RDH13-223	ENST00000610356	C2orf48	Q96LS8	159 aa		11.33	□□□□□ -0.6
RDH13-223	ENST00000610356	OR13C6P	Q8NH95	151 aa		11.33	□□□□□ -0.6
RDH13-223	ENST00000610356	TRBV7-7	A0A0K0K1E9	115 aa		11.32	□□□□□ -0.6
RDH13-223	ENST00000610356	INAFM2	P0DMQ5	153 aa		11.32	□□□□□ -0.6
RDH13-223	ENST00000610356	SDIM1	Q6ZPB5	146 aa		11.32	□□□□□ -0.6
RDH13-223	ENST00000610356	TTC32	Q5I0X7	151 aa		11.31	□□□□□ -0.6
RDH13-223	ENST00000610356	RMI2	Q96E14	147 aa		11.31	□□□□□ -0.6
RDH13-223	ENST00000610356		F8WDY8	70 aa		11.3	□□□□□ -0.6
RDH13-223	ENST00000610356	STAB2	Q8WWQ8	2551 aa		11.3	□□□□□ -0.6
RDH13-223	ENST00000610356	APLN	Q9ULZ1	77 aa		11.29	□□□□□ -0.6
RDH13-223	ENST00000610356		Q6ZRU5	148 aa		11.29	□□□□□ -0.6
RDH13-223	ENST00000610356	IMUP	Q9GZP8	106 aa		11.29	□□□□□ -0.6
RDH13-223	ENST00000610356		A0A087WYN8	130 aa		11.28	□□□□□ -0.6
RDH13-223	ENST00000610356	DNAL4	O96015	105 aa		11.28	□□□□□ -0.6
RDH13-223	ENST00000610356	PRR3	P79522	188 aa	Known RBP	11.27	□□□□□ -0.6
RDH13-223	ENST00000610356	UBE2DNL	Q8IWF7	75 aa		11.27	□□□□□ -0.6
RDH13-223	ENST00000610356	LINC00643	Q86TS7	51 aa		11.27	□□□□□ -0.61
RDH13-223	ENST00000610356	OBSCN-AS1	Q96MR7	158 aa		11.27	□□□□□ -0.61
RDH13-223	ENST00000610356	NUPR2	A6NF83	97 aa		11.25	□□□□□ -0.61
RDH13-223	ENST00000610356	NCR3	O14931	201 aa		11.25	□□□□□ -0.61
RDH13-223	ENST00000610356		Q8NDZ9	215 aa		11.25	□□□□□ -0.61
RDH13-223	ENST00000610356	TMEM126A	Q9H061	195 aa		11.25	□□□□□ -0.61
RDH13-223	ENST00000610356	COL7A1	Q02388	2944 aa		11.25	□□□□□ -0.61
RDH13-223	ENST00000610356	SYCN	Q0VAF6	134 aa		11.25	□□□□□ -0.61
RDH13-223	ENST00000610356		A0A1B0GX51	115 aa		11.23	□□□□□ -0.61
RDH13-223	ENST00000610356	SMCR5	Q8TEV8	140 aa		11.23	□□□□□ -0.61
RDH13-223	ENST00000610356	XAGE1A	Q9HD64	81 aa		11.23	□□□□□ -0.61
RDH13-223	ENST00000610356	USP17L23	D6RBM5	183 aa		11.23	□□□□□ -0.61
RDH13-223	ENST00000610356	NDUFC2-KCTD14	E9PQ53	114 aa		11.23	□□□□□ -0.61
RDH13-223	ENST00000610356	LECT2	O14960	151 aa		11.22	□□□□□ -0.61
RDH13-223	ENST00000610356	S100A7L2	Q5SY68	101 aa		11.22	□□□□□ -0.61
RDH13-223	ENST00000610356	LINC00167	Q96N53	147 aa		11.22	□□□□□ -0.61
RDH13-223	ENST00000610356	DNAH1	Q9P2D7	4330 aa		11.22	□□□□□ -0.61
RDH13-223	ENST00000610356	CASC10	Q5T4H9	136 aa		11.21	□□□□□ -0.61
RDH13-223	ENST00000610356	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.2	□□□□□ -0.62
RDH13-223	ENST00000610356	RPL18A	Q02543	176 aa	Known RBP	11.19	□□□□□ -0.62
RDH13-223	ENST00000610356	KRTAP1-5	Q9BYS1	174 aa		11.19	□□□□□ -0.62
RDH13-223	ENST00000610356	GAGE2A	Q6NT46	116 aa		11.18	□□□□□ -0.62
RDH13-223	ENST00000610356	ORMDL1	Q9P0S3	153 aa		11.18	□□□□□ -0.62
RDH13-223	ENST00000610356	C9orf129	Q5T035	196 aa	Known RBP	11.17	□□□□□ -0.62
RDH13-223	ENST00000610356		Q6ZRP5	223 aa		11.17	□□□□□ -0.62
RDH13-223	ENST00000610356	IGLV6-57	P01721	117 aa		11.16	□□□□□ -0.62
RDH13-223	ENST00000610356	KRTAP21-3	Q3LHN1	58 aa		11.16	□□□□□ -0.62
RDH13-223	ENST00000610356	VPREB1	P12018	145 aa		11.15	□□□□□ -0.62
RDH13-223	ENST00000610356		Q8N814	137 aa		11.15	□□□□□ -0.62
RDH13-223	ENST00000610356	CCDC179	H3BU77	68 aa		11.14	□□□□□ -0.63
RDH13-223	ENST00000610356	SLPI	P03973	132 aa		11.14	□□□□□ -0.63
RDH13-223	ENST00000610356	TLX1NB	P0CAT3	122 aa		11.14	□□□□□ -0.63
RDH13-223	ENST00000610356	C14orf132	Q9NPU4	83 aa		11.14	□□□□□ -0.63
RDH13-223	ENST00000610356	DNHD1	Q96M86	4753 aa		11.14	□□□□□ -0.63
RDH13-223	ENST00000610356	C6orf99	Q4VX62	202 aa		11.13	□□□□□ -0.63
RDH13-223	ENST00000610356	TRBV10-3	A0A0K0K1G6	114 aa		11.12	□□□□□ -0.63
RDH13-223	ENST00000610356		B5MCH6	92 aa		11.12	□□□□□ -0.63
RDH13-223	ENST00000610356	PSCA	O43653	123 aa		11.12	□□□□□ -0.63
RDH13-223	ENST00000610356	PRKDC	P78527	4128 aa	Known RBP	11.12	□□□□□ -0.63
RDH13-223	ENST00000610356	TMEM256-PLSCR3	K7ERE1	68 aa		11.11	□□□□□ -0.63
RDH13-223	ENST00000610356		M0R378	163 aa		11.11	□□□□□ -0.63
RDH13-223	ENST00000610356	TRAV23DV6	A0A075B6W5	121 aa		11.1	□□□□□ -0.63
RDH13-223	ENST00000610356	FAM236A	A0A1B0GUQ0	79 aa		11.1	□□□□□ -0.63
RDH13-223	ENST00000610356	FAM236B	A0A1B0GV22	79 aa		11.1	□□□□□ -0.63
RDH13-223	ENST00000610356	JMJD7-PLA2G4B	H0Y9G9	81 aa		11.1	□□□□□ -0.63
RDH13-223	ENST00000610356	NBDY	A0A0U1RRE5	68 aa		11.08	□□□□□ -0.64
RDH13-223	ENST00000610356	MEGF8	Q7Z7M0	2845 aa		11.08	□□□□□ -0.64
RDH13-223	ENST00000610356	CCK	P06307	115 aa		11.07	□□□□□ -0.64
RDH13-223	ENST00000610356		Q6JHZ5	121 aa		11.07	□□□□□ -0.64
RDH13-223	ENST00000610356	LINC00846	Q9NV44	126 aa		11.07	□□□□□ -0.64
RDH13-223	ENST00000610356	LINC00575	Q6W349	94 aa		11.07	□□□□□ -0.64
RDH13-223	ENST00000610356	DIRC1	Q969H9	104 aa		11.07	□□□□□ -0.64
RDH13-223	ENST00000610356	NKAPP1	Q8N9T2	125 aa		11.06	□□□□□ -0.64
RDH13-223	ENST00000610356	PLA2G2D	Q9UNK4	145 aa		11.05	□□□□□ -0.64
RDH13-223	ENST00000610356	PLEC	Q15149	4684 aa	Known RBP	11.05	□□□□□ -0.64
RDH13-223	ENST00000610356	LOC107984640	A0A0U1RRK4	108 aa		11.05	□□□□□ -0.64
RDH13-223	ENST00000610356	ZNF73	O43830	326 aa	Predicted RBP	11.05	□□□□□ -0.64
RDH13-223	ENST00000610356	HIST1H4A	P62805	103 aa	Known RBP	11.05	□□□□□ -0.64
RDH13-223	ENST00000610356	CSMD3	Q7Z407	3707 aa		11.05	□□□□□ -0.64
RDH13-223	ENST00000610356	C14orf177	Q52M58	125 aa		11.04	□□□□□ -0.64
RDH13-223	ENST00000610356	LYST	Q99698	3801 aa		11.04	□□□□□ -0.64
RDH13-223	ENST00000610356	SERTAD4-AS1	Q5TG53	156 aa		11.03	□□□□□ -0.64
RDH13-223	ENST00000610356	CNBP	P62633	177 aa	Known RBP	11.03	□□□□□ -0.64
RDH13-223	ENST00000610356	SS18L2	Q9UHA2	77 aa		11.03	□□□□□ -0.64
RDH13-223	ENST00000610356	DNAH7	Q8WXX0	4024 aa		11.01	□□□□□ -0.65

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