RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 FAT4Q6V0I7 4981 aa12.74□□□□□ -0.37
TMEM248-207ENST00000607045 ATP6V1G1O75348 118 aa12.73□□□□□ -0.37
TMEM248-207ENST00000607045 TRGC2P03986 189 aa12.72□□□□□ -0.37
TMEM248-207ENST00000607045 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-207ENST00000607045 RETNLBQ9BQ08 111 aa12.71□□□□□ -0.37
TMEM248-207ENST00000607045 LEPROTL1O95214 131 aa12.7□□□□□ -0.38
TMEM248-207ENST00000607045 LINC00158P58513 81 aa12.7□□□□□ -0.38
TMEM248-207ENST00000607045 SND1-IT1Q9HBX3 110 aa12.7□□□□□ -0.38
TMEM248-207ENST00000607045 TMEM223A0PJW6 202 aa12.69□□□□□ -0.38
TMEM248-207ENST00000607045 LINC00587B1AMM8 73 aa12.69□□□□□ -0.38
TMEM248-207ENST00000607045 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
TMEM248-207ENST00000607045 PRLHP81277 87 aa12.69□□□□□ -0.38
TMEM248-207ENST00000607045 FAM19A2Q8N3H0 131 aa12.69□□□□□ -0.38
TMEM248-207ENST00000607045 H0Y8G0 127 aa12.68□□□□□ -0.38
TMEM248-207ENST00000607045 VPREB1P12018 145 aa12.68□□□□□ -0.38
TMEM248-207ENST00000607045 FAM229BQ4G0N7 80 aa12.68□□□□□ -0.38
TMEM248-207ENST00000607045 SLC7A5P1Q8MH63 180 aa12.68□□□□□ -0.38
TMEM248-207ENST00000607045 HSPB8Q9UJY1 196 aa12.68□□□□□ -0.38
TMEM248-207ENST00000607045 Q8NDZ9 215 aa12.67□□□□□ -0.38
TMEM248-207ENST00000607045 TMEM126AQ9H061 195 aa12.67□□□□□ -0.38
TMEM248-207ENST00000607045 MUC17Q685J3 4493 aa12.67□□□□□ -0.38
TMEM248-207ENST00000607045 HERV-K104P63124 156 aa12.66□□□□□ -0.38
TMEM248-207ENST00000607045 FAM19A1Q7Z5A9 133 aa12.66□□□□□ -0.38
TMEM248-207ENST00000607045 LINC00304Q8N9R0 145 aa12.66□□□□□ -0.38
TMEM248-207ENST00000607045 SERF1AO75920 110 aa12.65□□□□□ -0.38
TMEM248-207ENST00000607045 MEIG1Q5JSS6 88 aa12.65□□□□□ -0.38
TMEM248-207ENST00000607045 M0R378 163 aa12.64□□□□□ -0.39
TMEM248-207ENST00000607045 PLNP26678 52 aa12.64□□□□□ -0.39
TMEM248-207ENST00000607045 MAP1LC3CQ9BXW4 147 aa12.64□□□□□ -0.39
TMEM248-207ENST00000607045 IGKV2D-26A0A0A0MRZ7 120 aa12.63□□□□□ -0.39
TMEM248-207ENST00000607045 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
TMEM248-207ENST00000607045 HERVK_113P61574 105 aa12.62□□□□□ -0.39
TMEM248-207ENST00000607045 PLEKHB2Q96CS7 222 aa12.62□□□□□ -0.39
TMEM248-207ENST00000607045 A0A0U1RQV1 116 aa12.61□□□□□ -0.39
TMEM248-207ENST00000607045 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
TMEM248-207ENST00000607045 FABP4P15090 132 aa12.59□□□□□ -0.39
TMEM248-207ENST00000607045 C3orf22Q8N5N4 141 aa12.59□□□□□ -0.39
TMEM248-207ENST00000607045 NDUFA12Q9UI09 145 aa12.59□□□□□ -0.39
TMEM248-207ENST00000607045 COLCA2A8K830 154 aa12.58□□□□□ -0.4
TMEM248-207ENST00000607045 S100A12P80511 92 aa12.58□□□□□ -0.4
TMEM248-207ENST00000607045 IGLV7-46A0A075B6I9 117 aa12.57□□□□□ -0.4
TMEM248-207ENST00000607045 DPM2O94777 84 aa12.57□□□□□ -0.4
TMEM248-207ENST00000607045 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
TMEM248-207ENST00000607045 LCE2AQ5TA79 106 aaPredicted RBP12.56□□□□□ -0.4
TMEM248-207ENST00000607045 LEPROTO15243 131 aa12.55□□□□□ -0.4
TMEM248-207ENST00000607045 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
TMEM248-207ENST00000607045 HIGD2AQ9BW72 106 aa12.55□□□□□ -0.4
TMEM248-207ENST00000607045 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
TMEM248-207ENST00000607045 IGKCP01834 107 aa12.54□□□□□ -0.4
TMEM248-207ENST00000607045 LGALS3P17931 250 aaKnown RBP12.53□□□□□ -0.4
TMEM248-207ENST00000607045 NMUP48645 174 aa12.53□□□□□ -0.4
TMEM248-207ENST00000607045 TPRXLQ17RH7 258 aa12.53□□□□□ -0.4
TMEM248-207ENST00000607045 MIR7-3HGQ8N6C7 128 aa12.53□□□□□ -0.4
TMEM248-207ENST00000607045 KRTAP9-2Q9BYQ4 174 aa12.53□□□□□ -0.4
TMEM248-207ENST00000607045 LINC00310P59036 64 aa12.52□□□□□ -0.41
TMEM248-207ENST00000607045 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
TMEM248-207ENST00000607045 J3QQQ9 107 aa12.5□□□□□ -0.41
TMEM248-207ENST00000607045 CTAG1AP78358 180 aa12.49□□□□□ -0.41
TMEM248-207ENST00000607045 SPRR4Q96PI1 79 aa12.49□□□□□ -0.41
TMEM248-207ENST00000607045 PPDPFQ9H3Y8 114 aa12.49□□□□□ -0.41
TMEM248-207ENST00000607045 PRYO14603 147 aa12.47□□□□□ -0.41
TMEM248-207ENST00000607045 NCR3O14931 201 aa12.46□□□□□ -0.41
TMEM248-207ENST00000607045 PMCHL2Q9BQD1 86 aa12.46□□□□□ -0.41
TMEM248-207ENST00000607045 ZNF706Q9Y5V0 76 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-207ENST00000607045 SPAG11AQ6PDA7 123 aa12.44□□□□□ -0.42
TMEM248-207ENST00000607045 ETDCA0A1B0GVM5 59 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BKO60814 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BJP06899 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BOP23527 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BBP33778 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BDP58876 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BCP62807 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST2H2BEQ16778 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.43□□□□□ -0.42
TMEM248-207ENST00000607045 DAND5Q8N907 189 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BHQ93079 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BNQ99877 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 HIST1H2BMQ99879 126 aa12.43□□□□□ -0.42
TMEM248-207ENST00000607045 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
TMEM248-207ENST00000607045 SMCR5Q8TEV8 140 aa12.42□□□□□ -0.42
TMEM248-207ENST00000607045 SYS1-DBNDD2H3BUS1 97 aa12.41□□□□□ -0.42
TMEM248-207ENST00000607045 KCNQ1DNQ9H478 68 aa12.41□□□□□ -0.42
TMEM248-207ENST00000607045 C4orf48Q5BLP8 95 aa12.4□□□□□ -0.42
TMEM248-207ENST00000607045 LINC00337Q8N6G1 96 aa12.4□□□□□ -0.42
TMEM248-207ENST00000607045 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 TRBV10-2A0A0K0K1G8 114 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 E9PLD3 99 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 SPRR1AP35321 89 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 S100A7L2Q5SY68 101 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 Q8NBF4 154 aa12.39□□□□□ -0.43
TMEM248-207ENST00000607045 KRTAP4-16G5E9R7 235 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-207ENST00000607045 PET117Q6UWS5 81 aa12.38□□□□□ -0.43
TMEM248-207ENST00000607045 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-207ENST00000607045 CBY1Q9Y3M2 126 aa12.38□□□□□ -0.43
TMEM248-207ENST00000607045 TRBV10-3A0A0K0K1G6 114 aa12.37□□□□□ -0.43
TMEM248-207ENST00000607045 DDTP30046 118 aa12.37□□□□□ -0.43
TMEM248-207ENST00000607045 NDUFC2O95298 119 aa12.35□□□□□ -0.43
TMEM248-207ENST00000607045 FP248Q71RG6 208 aaPredicted RBP12.34□□□□□ -0.43
TMEM248-207ENST00000607045 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms