RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
VIM-AS1-202ENST00000605833 C10orf25Q5T742 122 aa12.6□□□□□ -0.39
VIM-AS1-202ENST00000605833 C6orf48Q9UBA6 75 aa12.59□□□□□ -0.39
VIM-AS1-202ENST00000605833 SFTA2Q6UW10 78 aa12.58□□□□□ -0.4
VIM-AS1-202ENST00000605833 LEPROTO15243 131 aa12.57□□□□□ -0.4
VIM-AS1-202ENST00000605833 PLEKHB2Q96CS7 222 aa12.57□□□□□ -0.4
VIM-AS1-202ENST00000605833 MUC2Q02817 5179 aa12.57□□□□□ -0.4
VIM-AS1-202ENST00000605833 KRTAP1-4P0C5Y4 121 aa12.55□□□□□ -0.4
VIM-AS1-202ENST00000605833 GAGE2EQ4V326 116 aa12.55□□□□□ -0.4
VIM-AS1-202ENST00000605833 GAGE2DQ9UEU5 116 aa12.55□□□□□ -0.4
VIM-AS1-202ENST00000605833 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
VIM-AS1-202ENST00000605833 IGLV1-50A0A075B6I6 118 aa12.53□□□□□ -0.4
VIM-AS1-202ENST00000605833 E9PLD3 99 aa12.53□□□□□ -0.4
VIM-AS1-202ENST00000605833 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
VIM-AS1-202ENST00000605833 TLX1NBP0CAT3 122 aa12.53□□□□□ -0.4
VIM-AS1-202ENST00000605833 PRR4Q16378 134 aa12.53□□□□□ -0.4
VIM-AS1-202ENST00000605833 J3QQQ9 107 aa12.52□□□□□ -0.41
VIM-AS1-202ENST00000605833 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.41
VIM-AS1-202ENST00000605833 M0QXV9 152 aa12.51□□□□□ -0.41
VIM-AS1-202ENST00000605833 UBE2BP63146 152 aa12.51□□□□□ -0.41
VIM-AS1-202ENST00000605833 ATOH7Q8N100 152 aa12.51□□□□□ -0.41
VIM-AS1-202ENST00000605833 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
VIM-AS1-202ENST00000605833 NDUFA12Q9UI09 145 aa12.51□□□□□ -0.41
VIM-AS1-202ENST00000605833 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
VIM-AS1-202ENST00000605833 NDUFC2-KCTD14E9PQ53 114 aa12.5□□□□□ -0.41
VIM-AS1-202ENST00000605833 NMUP48645 174 aa12.5□□□□□ -0.41
VIM-AS1-202ENST00000605833 HERV-K104P63124 156 aa12.49□□□□□ -0.41
VIM-AS1-202ENST00000605833 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
VIM-AS1-202ENST00000605833 HSBP1L1C9JCN9 74 aa12.47□□□□□ -0.41
VIM-AS1-202ENST00000605833 ERG28Q9UKR5 140 aa12.47□□□□□ -0.41
VIM-AS1-202ENST00000605833 LINC00587B1AMM8 73 aa12.46□□□□□ -0.41
VIM-AS1-202ENST00000605833 COX17Q14061 63 aa12.46□□□□□ -0.41
VIM-AS1-202ENST00000605833 PFN2P35080 140 aa12.45□□□□□ -0.42
VIM-AS1-202ENST00000605833 JOSD1Q15040 202 aaPredicted RBP12.44□□□□□ -0.42
VIM-AS1-202ENST00000605833 ANKRD39Q53RE8 183 aa12.44□□□□□ -0.42
VIM-AS1-202ENST00000605833 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
VIM-AS1-202ENST00000605833 C9orf129Q5T035 196 aaKnown RBP12.44□□□□□ -0.42
VIM-AS1-202ENST00000605833 IGKV2D-26A0A0A0MRZ7 120 aa12.43□□□□□ -0.42
VIM-AS1-202ENST00000605833 RPL13AP40429 203 aaKnown RBP12.43□□□□□ -0.42
VIM-AS1-202ENST00000605833 LINC00158P58513 81 aa12.42□□□□□ -0.42
VIM-AS1-202ENST00000605833 ZNF815PA8K554 130 aa12.39□□□□□ -0.43
VIM-AS1-202ENST00000605833 TSPAN13O95857 204 aa12.39□□□□□ -0.43
VIM-AS1-202ENST00000605833 SMIM13P0DJ93 91 aa12.39□□□□□ -0.43
VIM-AS1-202ENST00000605833 A0A0U1RRA0 63 aa12.38□□□□□ -0.43
VIM-AS1-202ENST00000605833 KRTAP9-2Q9BYQ4 174 aa12.38□□□□□ -0.43
VIM-AS1-202ENST00000605833 XAGE1AQ9HD64 81 aa12.38□□□□□ -0.43
VIM-AS1-202ENST00000605833 A0A0J9YXY3 114 aa12.37□□□□□ -0.43
VIM-AS1-202ENST00000605833 ZNF861PO60384 105 aa12.36□□□□□ -0.43
VIM-AS1-202ENST00000605833 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
VIM-AS1-202ENST00000605833 A0A0U1RQV1 116 aa12.35□□□□□ -0.43
VIM-AS1-202ENST00000605833 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
VIM-AS1-202ENST00000605833 PYY3Q5JQD4 70 aa12.34□□□□□ -0.43
VIM-AS1-202ENST00000605833 PCP2Q8IVA1 136 aa12.34□□□□□ -0.43
VIM-AS1-202ENST00000605833 MIR7-3HGQ8N6C7 128 aa12.34□□□□□ -0.43
VIM-AS1-202ENST00000605833 VAMP8Q9BV40 100 aa12.33□□□□□ -0.44
VIM-AS1-202ENST00000605833 A0A087X002 238 aa12.32□□□□□ -0.44
VIM-AS1-202ENST00000605833 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
VIM-AS1-202ENST00000605833 C22orf24Q9Y442 160 aa12.32□□□□□ -0.44
VIM-AS1-202ENST00000605833 TIMM17BO60830 172 aa12.31□□□□□ -0.44
VIM-AS1-202ENST00000605833 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
VIM-AS1-202ENST00000605833 PAM16Q9Y3D7 125 aa12.3□□□□□ -0.44
VIM-AS1-202ENST00000605833 FAT4Q6V0I7 4981 aa12.29□□□□□ -0.44
VIM-AS1-202ENST00000605833 RPL24P83731 157 aaKnown RBP12.28□□□□□ -0.44
VIM-AS1-202ENST00000605833 DAND5Q8N907 189 aa12.28□□□□□ -0.44
VIM-AS1-202ENST00000605833 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
VIM-AS1-202ENST00000605833 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
VIM-AS1-202ENST00000605833 COX8AP10176 69 aa12.26□□□□□ -0.45
VIM-AS1-202ENST00000605833 LBHQ53QV2 105 aaPredicted RBP12.26□□□□□ -0.45
VIM-AS1-202ENST00000605833 LITAFQ99732 161 aa12.26□□□□□ -0.45
VIM-AS1-202ENST00000605833 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
VIM-AS1-202ENST00000605833 LOC107984156A0A0G2JMH3 177 aa12.25□□□□□ -0.45
VIM-AS1-202ENST00000605833 ARL17AQ8IVW1 177 aa12.25□□□□□ -0.45
VIM-AS1-202ENST00000605833 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
VIM-AS1-202ENST00000605833 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
VIM-AS1-202ENST00000605833 TYMSOSQ8TAI1 123 aa12.25□□□□□ -0.45
VIM-AS1-202ENST00000605833 TP73-AS1Q9UF72 201 aa12.25□□□□□ -0.45
VIM-AS1-202ENST00000605833 IGLV5-37A0A075B6J1 123 aa12.24□□□□□ -0.45
VIM-AS1-202ENST00000605833 LCE2AQ5TA79 106 aaPredicted RBP12.24□□□□□ -0.45
VIM-AS1-202ENST00000605833 DLEU1O43261 78 aa12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 BCE1O60756 84 aa12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 VPREB1P12018 145 aa12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 RPL28P46779 137 aaKnown RBP12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 S100A12P80511 92 aa12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
VIM-AS1-202ENST00000605833 CRYGAP11844 174 aa12.22□□□□□ -0.45
VIM-AS1-202ENST00000605833 Q6ZVH6 145 aa12.22□□□□□ -0.45
VIM-AS1-202ENST00000605833 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
VIM-AS1-202ENST00000605833 RETNLBQ9BQ08 111 aa12.22□□□□□ -0.45
VIM-AS1-202ENST00000605833 SPANXDQ9BXN6 97 aa12.22□□□□□ -0.45
VIM-AS1-202ENST00000605833 SPANXCQ9NY87 97 aa12.22□□□□□ -0.45
VIM-AS1-202ENST00000605833 NPC2P61916 151 aa12.21□□□□□ -0.45
VIM-AS1-202ENST00000605833 LINC00308Q8TCZ7 52 aa12.21□□□□□ -0.45
VIM-AS1-202ENST00000605833 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
VIM-AS1-202ENST00000605833 MUC17Q685J3 4493 aa12.2□□□□□ -0.46
VIM-AS1-202ENST00000605833 LOC105371267A0A1B0GV96 52 aa12.2□□□□□ -0.46
VIM-AS1-202ENST00000605833 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
VIM-AS1-202ENST00000605833 SLC25A34Q6PIV7 304 aa12.2□□□□□ -0.46
VIM-AS1-202ENST00000605833 GAGE10A6NGK3 116 aa12.18□□□□□ -0.46
VIM-AS1-202ENST00000605833 IFITM1P13164 125 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms