RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 MIFP14174 115 aa8.49□□□□□ -1.05
CDCA3-212ENST00000604599 GYPEP15421 78 aa8.49□□□□□ -1.05
CDCA3-212ENST00000604599 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
CDCA3-212ENST00000604599 COX17Q14061 63 aa8.48□□□□□ -1.05
CDCA3-212ENST00000604599 MUC7Q8TAX7 377 aa8.48□□□□□ -1.05
CDCA3-212ENST00000604599 NREPQ16612 68 aa8.48□□□□□ -1.05
CDCA3-212ENST00000604599 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
CDCA3-212ENST00000604599 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
CDCA3-212ENST00000604599 CHCHD10Q8WYQ3 142 aaPredicted RBP8.47□□□□□ -1.05
CDCA3-212ENST00000604599 NDUFC1O43677 76 aa8.46□□□□□ -1.06
CDCA3-212ENST00000604599 Q8N9L7 120 aa8.46□□□□□ -1.06
CDCA3-212ENST00000604599 TMEM254Q8TBM7 123 aa8.46□□□□□ -1.06
CDCA3-212ENST00000604599 A0A1B0GUV1 79 aa8.46□□□□□ -1.06
CDCA3-212ENST00000604599 C10orf25Q5T742 122 aa8.46□□□□□ -1.06
CDCA3-212ENST00000604599 C9orf66Q5T8R8 295 aa8.46□□□□□ -1.06
CDCA3-212ENST00000604599 ABCA12Q86UK0 2595 aa8.45□□□□□ -1.06
CDCA3-212ENST00000604599 CCL24O00175 119 aa8.45□□□□□ -1.06
CDCA3-212ENST00000604599 FSHBP01225 129 aa8.45□□□□□ -1.06
CDCA3-212ENST00000604599 LINC01006Q8NI28 216 aa8.45□□□□□ -1.06
CDCA3-212ENST00000604599 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
CDCA3-212ENST00000604599 CSNK1G2-AS1Q8NCQ2 148 aa8.45□□□□□ -1.06
CDCA3-212ENST00000604599 BPY2O14599 106 aa8.44□□□□□ -1.06
CDCA3-212ENST00000604599 DSCR9P59020 149 aa8.44□□□□□ -1.06
CDCA3-212ENST00000604599 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
CDCA3-212ENST00000604599 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
CDCA3-212ENST00000604599 PDE6GP18545 87 aa8.44□□□□□ -1.06
CDCA3-212ENST00000604599 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
CDCA3-212ENST00000604599 IGSF10Q6WRI0 2623 aa8.43□□□□□ -1.06
CDCA3-212ENST00000604599 ATP5EP56381 51 aaPredicted RBP8.43□□□□□ -1.06
CDCA3-212ENST00000604599 BBC3Q96PG8 261 aaPredicted RBP8.42□□□□□ -1.06
CDCA3-212ENST00000604599 IGLV6-57P01721 117 aa8.42□□□□□ -1.06
CDCA3-212ENST00000604599 REG3AQ06141 175 aa8.41□□□□□ -1.06
CDCA3-212ENST00000604599 IGHV4-31P0DP07 118 aa8.41□□□□□ -1.06
CDCA3-212ENST00000604599 CCDC168Q8NDH2 2452 aa8.4□□□□□ -1.06
CDCA3-212ENST00000604599 SPAG11BQ08648 103 aa8.4□□□□□ -1.06
CDCA3-212ENST00000604599 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.06
CDCA3-212ENST00000604599 DIRC1Q969H9 104 aa8.4□□□□□ -1.07
CDCA3-212ENST00000604599 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.07
CDCA3-212ENST00000604599 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
CDCA3-212ENST00000604599 CYSRT1A8MQ03 144 aa8.38□□□□□ -1.07
CDCA3-212ENST00000604599 PRYO14603 147 aa8.38□□□□□ -1.07
CDCA3-212ENST00000604599 DAD1P61803 113 aa8.38□□□□□ -1.07
CDCA3-212ENST00000604599 C1orf195Q5TG92 126 aa8.38□□□□□ -1.07
CDCA3-212ENST00000604599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-212ENST00000604599 PRO0255Q9UI72 69 aa8.37□□□□□ -1.07
CDCA3-212ENST00000604599 ZNF462Q96JM2 2506 aa8.37□□□□□ -1.07
CDCA3-212ENST00000604599 ZNF73O43830 326 aaPredicted RBP8.36□□□□□ -1.07
CDCA3-212ENST00000604599 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
CDCA3-212ENST00000604599 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDCA3-212ENST00000604599 F8WDY8 70 aa8.36□□□□□ -1.07
CDCA3-212ENST00000604599 COX7BP24311 80 aa8.36□□□□□ -1.07
CDCA3-212ENST00000604599 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
CDCA3-212ENST00000604599 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
CDCA3-212ENST00000604599 ESRGQ1W209 222 aa8.35□□□□□ -1.07
CDCA3-212ENST00000604599 OCR1Q9BZK8 76 aa8.35□□□□□ -1.07
CDCA3-212ENST00000604599 H3BQ85 93 aa8.34□□□□□ -1.07
CDCA3-212ENST00000604599 ERC2-IT1O76042 136 aa8.34□□□□□ -1.07
CDCA3-212ENST00000604599 CMC4P56277 68 aaPredicted RBP8.34□□□□□ -1.07
CDCA3-212ENST00000604599 C3orf84H3BNL1 204 aa8.33□□□□□ -1.08
CDCA3-212ENST00000604599 V9GYY9 64 aa8.33□□□□□ -1.08
CDCA3-212ENST00000604599 IGLV1-51P01701 117 aa8.33□□□□□ -1.08
CDCA3-212ENST00000604599 A0A0J9YWU9 116 aa8.33□□□□□ -1.08
CDCA3-212ENST00000604599 DEFB4AO15263 64 aa8.33□□□□□ -1.08
CDCA3-212ENST00000604599 IGHV4-30-4P0DP06 118 aa8.33□□□□□ -1.08
CDCA3-212ENST00000604599 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
CDCA3-212ENST00000604599 Q6ZTC4 211 aa8.32□□□□□ -1.08
CDCA3-212ENST00000604599 LINC00612Q8N6U2 182 aa8.32□□□□□ -1.08
CDCA3-212ENST00000604599 MTORP42345 2549 aa8.32□□□□□ -1.08
CDCA3-212ENST00000604599 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
CDCA3-212ENST00000604599 DNAJC9-AS1A6NH13 148 aa8.31□□□□□ -1.08
CDCA3-212ENST00000604599 CELA1Q9UNI1 258 aa8.31□□□□□ -1.08
CDCA3-212ENST00000604599 C6orf48Q9UBA6 75 aa8.31□□□□□ -1.08
CDCA3-212ENST00000604599 KLK12Q9UKR0 248 aa8.31□□□□□ -1.08
CDCA3-212ENST00000604599 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
CDCA3-212ENST00000604599 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
CDCA3-212ENST00000604599 SEC61GP60059 68 aa8.29□□□□□ -1.08
CDCA3-212ENST00000604599 X6R8D5 127 aa8.29□□□□□ -1.08
CDCA3-212ENST00000604599 OXLD1Q5BKU9 147 aa8.28□□□□□ -1.08
CDCA3-212ENST00000604599 HIGD2BQ4VC39 106 aa8.27□□□□□ -1.09
CDCA3-212ENST00000604599 KRTAP10-9P60411 292 aa8.27□□□□□ -1.09
CDCA3-212ENST00000604599 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
CDCA3-212ENST00000604599 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
CDCA3-212ENST00000604599 VPREB1P12018 145 aa8.25□□□□□ -1.09
CDCA3-212ENST00000604599 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
CDCA3-212ENST00000604599 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
CDCA3-212ENST00000604599 ACANP16112 2415 aa8.24□□□□□ -1.09
CDCA3-212ENST00000604599 HTN3P15516 51 aa8.24□□□□□ -1.09
CDCA3-212ENST00000604599 USP24Q9UPU5 2620 aa8.24□□□□□ -1.09
CDCA3-212ENST00000604599 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
CDCA3-212ENST00000604599 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
CDCA3-212ENST00000604599 HIVEP2P31629 2446 aa8.23□□□□□ -1.09
CDCA3-212ENST00000604599 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
CDCA3-212ENST00000604599 Q6ZRP5 223 aa8.22□□□□□ -1.09
CDCA3-212ENST00000604599 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
CDCA3-212ENST00000604599 M0R378 163 aa8.21□□□□□ -1.09
CDCA3-212ENST00000604599 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.09
CDCA3-212ENST00000604599 PSPHP1O15172 72 aa8.2□□□□□ -1.1
CDCA3-212ENST00000604599 PRR4Q16378 134 aa8.2□□□□□ -1.1
CDCA3-212ENST00000604599 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
CDCA3-212ENST00000604599 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms