RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 A0A096LNI7 61 aa11.92□□□□□ -0.5
SSBP4-212ENST00000601919 NDUFC2O95298 119 aa11.92□□□□□ -0.5
SSBP4-212ENST00000601919 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
SSBP4-212ENST00000601919 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
SSBP4-212ENST00000601919 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
SSBP4-212ENST00000601919 A4D1N5 150 aa11.91□□□□□ -0.5
SSBP4-212ENST00000601919 FXYD2P54710 66 aa11.91□□□□□ -0.5
SSBP4-212ENST00000601919 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
SSBP4-212ENST00000601919 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
SSBP4-212ENST00000601919 EIF4EBP3O60516 100 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-212ENST00000601919 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
SSBP4-212ENST00000601919 PLA2G2DQ9UNK4 145 aa11.9□□□□□ -0.5
SSBP4-212ENST00000601919 A6NDN8 102 aa11.89□□□□□ -0.51
SSBP4-212ENST00000601919 BATFQ16520 125 aa11.88□□□□□ -0.51
SSBP4-212ENST00000601919 KMT2CQ8NEZ4 4911 aaKnown RBP11.88□□□□□ -0.51
SSBP4-212ENST00000601919 RYR2Q92736 4967 aa11.87□□□□□ -0.51
SSBP4-212ENST00000601919 RAB37Q96AX2 223 aa11.86□□□□□ -0.51
SSBP4-212ENST00000601919 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
SSBP4-212ENST00000601919 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
SSBP4-212ENST00000601919 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
SSBP4-212ENST00000601919 A0A1B0GVY2 172 aa11.85□□□□□ -0.51
SSBP4-212ENST00000601919 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
SSBP4-212ENST00000601919 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
SSBP4-212ENST00000601919 A0A0B4J2C4 111 aa11.84□□□□□ -0.51
SSBP4-212ENST00000601919 CHTF8P0CG12 524 aa11.84□□□□□ -0.51
SSBP4-212ENST00000601919 VPREB1P12018 145 aa11.84□□□□□ -0.51
SSBP4-212ENST00000601919 SPACA4Q8TDM5 124 aa11.84□□□□□ -0.51
SSBP4-212ENST00000601919 IGLV5-37A0A075B6J1 123 aa11.83□□□□□ -0.52
SSBP4-212ENST00000601919 CFC1BP0CG36 223 aa11.83□□□□□ -0.52
SSBP4-212ENST00000601919 CFC1P0CG37 223 aa11.83□□□□□ -0.52
SSBP4-212ENST00000601919 SNHG12Q9BXW3 62 aa11.83□□□□□ -0.52
SSBP4-212ENST00000601919 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
SSBP4-212ENST00000601919 M0R378 163 aa11.82□□□□□ -0.52
SSBP4-212ENST00000601919 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
SSBP4-212ENST00000601919 IGKV2-28A0A075B6P5 120 aa11.81□□□□□ -0.52
SSBP4-212ENST00000601919 FAM168BA1KXE4 195 aa11.81□□□□□ -0.52
SSBP4-212ENST00000601919 NCR3O14931 201 aa11.81□□□□□ -0.52
SSBP4-212ENST00000601919 IGKV2D-28P01615 120 aa11.81□□□□□ -0.52
SSBP4-212ENST00000601919 SERTAD4-AS1Q5TG53 156 aa11.81□□□□□ -0.52
SSBP4-212ENST00000601919 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.81□□□□□ -0.52
SSBP4-212ENST00000601919 PRR3P79522 188 aaKnown RBP11.8□□□□□ -0.52
SSBP4-212ENST00000601919 S100A7L2Q5SY68 101 aa11.8□□□□□ -0.52
SSBP4-212ENST00000601919 Q8NDZ9 215 aa11.8□□□□□ -0.52
SSBP4-212ENST00000601919 PRO1854Q9UHT4 67 aa11.8□□□□□ -0.52
SSBP4-212ENST00000601919 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
SSBP4-212ENST00000601919 OR13C6PQ8NH95 151 aa11.79□□□□□ -0.52
SSBP4-212ENST00000601919 TMEM126AQ9H061 195 aa11.79□□□□□ -0.52
SSBP4-212ENST00000601919 CBY1Q9Y3M2 126 aa11.79□□□□□ -0.52
SSBP4-212ENST00000601919 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
SSBP4-212ENST00000601919 KRTAP10-1P60331 282 aa11.78□□□□□ -0.52
SSBP4-212ENST00000601919 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
SSBP4-212ENST00000601919 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
SSBP4-212ENST00000601919 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
SSBP4-212ENST00000601919 PANO1I0J062 215 aa11.77□□□□□ -0.53
SSBP4-212ENST00000601919 M0QXV9 152 aa11.77□□□□□ -0.53
SSBP4-212ENST00000601919 COL5A1-AS1Q5SY13 56 aa11.77□□□□□ -0.53
SSBP4-212ENST00000601919 MRPL55Q7Z7F7 128 aaKnown RBP11.77□□□□□ -0.53
SSBP4-212ENST00000601919 HECTD4Q9Y4D8 3996 aa11.76□□□□□ -0.53
SSBP4-212ENST00000601919 A0A087WYN8 130 aa11.76□□□□□ -0.53
SSBP4-212ENST00000601919 K7ERJ3 54 aa11.76□□□□□ -0.53
SSBP4-212ENST00000601919 RPL13AP40429 203 aaKnown RBP11.76□□□□□ -0.53
SSBP4-212ENST00000601919 Q6ZSA8 131 aa11.75□□□□□ -0.53
SSBP4-212ENST00000601919 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
SSBP4-212ENST00000601919 PLAC8Q9NZF1 115 aa11.75□□□□□ -0.53
SSBP4-212ENST00000601919 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
SSBP4-212ENST00000601919 Q1RN00 199 aa11.74□□□□□ -0.53
SSBP4-212ENST00000601919 C7orf33Q8WU49 177 aa11.74□□□□□ -0.53
SSBP4-212ENST00000601919 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
SSBP4-212ENST00000601919 IGLV6-57P01721 117 aa11.73□□□□□ -0.53
SSBP4-212ENST00000601919 PKD1P98161 4303 aa11.73□□□□□ -0.53
SSBP4-212ENST00000601919 TRBV10-3A0A0K0K1G6 114 aa11.72□□□□□ -0.53
SSBP4-212ENST00000601919 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
SSBP4-212ENST00000601919 H7C2G1 150 aa11.72□□□□□ -0.53
SSBP4-212ENST00000601919 LINC00167Q96N53 147 aa11.72□□□□□ -0.53
SSBP4-212ENST00000601919 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
SSBP4-212ENST00000601919 UBE2BP63146 152 aa11.69□□□□□ -0.54
SSBP4-212ENST00000601919 IGLV1-50A0A075B6I6 118 aa11.68□□□□□ -0.54
SSBP4-212ENST00000601919 TRAV23DV6A0A075B6W5 121 aa11.68□□□□□ -0.54
SSBP4-212ENST00000601919 RPL37AP8A6NKH3 93 aa11.68□□□□□ -0.54
SSBP4-212ENST00000601919 PHF5AQ7RTV0 110 aaKnown RBP11.68□□□□□ -0.54
SSBP4-212ENST00000601919 PRYO14603 147 aa11.67□□□□□ -0.54
SSBP4-212ENST00000601919 TSPAN13O95857 204 aa11.67□□□□□ -0.54
SSBP4-212ENST00000601919 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
SSBP4-212ENST00000601919 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
SSBP4-212ENST00000601919 KCNQ1DNQ9H478 68 aa11.67□□□□□ -0.54
SSBP4-212ENST00000601919 TAX1BP3O14907 124 aa11.66□□□□□ -0.54
SSBP4-212ENST00000601919 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
SSBP4-212ENST00000601919 PSMB2P49721 201 aa11.66□□□□□ -0.54
SSBP4-212ENST00000601919 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
SSBP4-212ENST00000601919 C9orf118A6NHY6 69 aa11.65□□□□□ -0.54
SSBP4-212ENST00000601919 COX6CP09669 75 aa11.65□□□□□ -0.54
SSBP4-212ENST00000601919 RYR3Q15413 4870 aa11.64□□□□□ -0.55
SSBP4-212ENST00000601919 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
SSBP4-212ENST00000601919 ZNF73O43830 326 aaPredicted RBP11.63□□□□□ -0.55
SSBP4-212ENST00000601919 VAMP3Q15836 100 aa11.63□□□□□ -0.55
SSBP4-212ENST00000601919 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
SSBP4-212ENST00000601919 LYRM7Q5U5X0 104 aa11.62□□□□□ -0.55
SSBP4-212ENST00000601919 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
SSBP4-212ENST00000601919 H3BUT2 72 aa11.61□□□□□ -0.55
SSBP4-212ENST00000601919 C6orf99Q4VX62 202 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms