RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CEND1Q8N111 149 aa8.86□□□□□ -0.99
IRF3-225ENST00000600022 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
IRF3-225ENST00000600022 COX11Q9Y6N1 276 aa8.84□□□□□ -0.99
IRF3-225ENST00000600022 OXTP01178 125 aa8.83□□□□□ -1
IRF3-225ENST00000600022 RPL24P83731 157 aaKnown RBP8.83□□□□□ -1
IRF3-225ENST00000600022 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
IRF3-225ENST00000600022 IFITM1P13164 125 aa8.82□□□□□ -1
IRF3-225ENST00000600022 SPAG11BQ08648 103 aa8.82□□□□□ -1
IRF3-225ENST00000600022 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
IRF3-225ENST00000600022 SPANXCQ9NY87 97 aa8.82□□□□□ -1
IRF3-225ENST00000600022 PLA2G2DQ9UNK4 145 aa8.82□□□□□ -1
IRF3-225ENST00000600022 PANO1I0J062 215 aa8.81□□□□□ -1
IRF3-225ENST00000600022 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
IRF3-225ENST00000600022 SMIM13P0DJ93 91 aa8.81□□□□□ -1
IRF3-225ENST00000600022 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.79□□□□□ -1
IRF3-225ENST00000600022 FXYD2P54710 66 aa8.79□□□□□ -1
IRF3-225ENST00000600022 LINC00158P58513 81 aa8.79□□□□□ -1
IRF3-225ENST00000600022 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
IRF3-225ENST00000600022 F8WDY8 70 aa8.78□□□□□ -1
IRF3-225ENST00000600022 MT1HL1P0DM35 61 aa8.78□□□□□ -1
IRF3-225ENST00000600022 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
IRF3-225ENST00000600022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
IRF3-225ENST00000600022 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
IRF3-225ENST00000600022 COX17Q14061 63 aa8.77□□□□□ -1.01
IRF3-225ENST00000600022 MUSTN1Q8IVN3 82 aa8.77□□□□□ -1.01
IRF3-225ENST00000600022 LITAFQ99732 161 aa8.77□□□□□ -1.01
IRF3-225ENST00000600022 ERG28Q9UKR5 140 aa8.77□□□□□ -1.01
IRF3-225ENST00000600022 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
IRF3-225ENST00000600022 KIAA0087Q14695 138 aa8.76□□□□□ -1.01
IRF3-225ENST00000600022 PFN2P35080 140 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 RAB37Q96AX2 223 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 CAMK2N2Q96S95 79 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
IRF3-225ENST00000600022 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
IRF3-225ENST00000600022 LINC00308Q8TCZ7 52 aa8.74□□□□□ -1.01
IRF3-225ENST00000600022 LRP2P98164 4655 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
IRF3-225ENST00000600022 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 A4D1N5 150 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 NPC2P61916 151 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 MIR7-3HGQ8N6C7 128 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 DAND5Q8N907 189 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
IRF3-225ENST00000600022 A0A1B0GWB2 263 aa8.72□□□□□ -1.01
IRF3-225ENST00000600022 TNXBP22105 4242 aa8.72□□□□□ -1.01
IRF3-225ENST00000600022 A0A0B4J2C4 111 aa8.71□□□□□ -1.02
IRF3-225ENST00000600022 TAX1BP3O14907 124 aa8.71□□□□□ -1.02
IRF3-225ENST00000600022 C14orf177Q52M58 125 aa8.71□□□□□ -1.02
IRF3-225ENST00000600022 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
IRF3-225ENST00000600022 RNF213Q63HN8 5207 aa8.71□□□□□ -1.02
IRF3-225ENST00000600022 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
IRF3-225ENST00000600022 K7ERJ3 54 aa8.7□□□□□ -1.02
IRF3-225ENST00000600022 SLPIP03973 132 aa8.7□□□□□ -1.02
IRF3-225ENST00000600022 PRO1854Q9UHT4 67 aa8.7□□□□□ -1.02
IRF3-225ENST00000600022 CFC1BP0CG36 223 aa8.69□□□□□ -1.02
IRF3-225ENST00000600022 CFC1P0CG37 223 aa8.69□□□□□ -1.02
IRF3-225ENST00000600022 SYCNQ0VAF6 134 aa8.69□□□□□ -1.02
IRF3-225ENST00000600022 LINC00526Q96FQ7 95 aa8.69□□□□□ -1.02
IRF3-225ENST00000600022 A0A1B0GV90 55 aa8.68□□□□□ -1.02
IRF3-225ENST00000600022 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
IRF3-225ENST00000600022 Q1RN00 199 aa8.68□□□□□ -1.02
IRF3-225ENST00000600022 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
IRF3-225ENST00000600022 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
IRF3-225ENST00000600022 H3BUT2 72 aa8.67□□□□□ -1.02
IRF3-225ENST00000600022 VAMP3Q15836 100 aa8.67□□□□□ -1.02
IRF3-225ENST00000600022 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
IRF3-225ENST00000600022 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
IRF3-225ENST00000600022 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
IRF3-225ENST00000600022 FABP2P12104 132 aa8.66□□□□□ -1.02
IRF3-225ENST00000600022 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
IRF3-225ENST00000600022 RNF151Q2KHN1 245 aa8.65□□□□□ -1.02
IRF3-225ENST00000600022 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
IRF3-225ENST00000600022 Q6ZRU5 148 aa8.65□□□□□ -1.02
IRF3-225ENST00000600022 A0A087WYN8 130 aa8.64□□□□□ -1.03
IRF3-225ENST00000600022 PSMB2P49721 201 aa8.64□□□□□ -1.03
IRF3-225ENST00000600022 SOSTDC1Q6X4U4 206 aa8.64□□□□□ -1.03
IRF3-225ENST00000600022 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 H7C2G1 150 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
IRF3-225ENST00000600022 GTF2H5Q6ZYL4 71 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 DPH3Q96FX2 82 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
IRF3-225ENST00000600022 NDUFC2O95298 119 aa8.62□□□□□ -1.03
IRF3-225ENST00000600022 TSPAN13O95857 204 aa8.62□□□□□ -1.03
IRF3-225ENST00000600022 COX6CP09669 75 aa8.62□□□□□ -1.03
IRF3-225ENST00000600022 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
IRF3-225ENST00000600022 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
IRF3-225ENST00000600022 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
IRF3-225ENST00000600022 GAGE10A6NGK3 116 aa8.6□□□□□ -1.03
IRF3-225ENST00000600022 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
IRF3-225ENST00000600022 OR13C6PQ8NH95 151 aa8.6□□□□□ -1.03
IRF3-225ENST00000600022 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms