RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
IRF3-223ENST00000599223 SPINK8P0C7L1 97 aa8.99□□□□□ -0.97
IRF3-223ENST00000599223 MALP21145 153 aa8.99□□□□□ -0.97
IRF3-223ENST00000599223 CTAG1AP78358 180 aa8.99□□□□□ -0.97
IRF3-223ENST00000599223 C9orf116Q5BN46 136 aaPredicted RBP8.99□□□□□ -0.97
IRF3-223ENST00000599223 C5orf38Q86SI9 138 aa8.99□□□□□ -0.97
IRF3-223ENST00000599223 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
IRF3-223ENST00000599223 M0R143 59 aa8.98□□□□□ -0.97
IRF3-223ENST00000599223 RPL18AQ02543 176 aaKnown RBP8.98□□□□□ -0.97
IRF3-223ENST00000599223 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
IRF3-223ENST00000599223 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
IRF3-223ENST00000599223 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
IRF3-223ENST00000599223 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
IRF3-223ENST00000599223 C2orf48Q96LS8 159 aa8.96□□□□□ -0.98
IRF3-223ENST00000599223 HSD52Q0P140 79 aa8.95□□□□□ -0.98
IRF3-223ENST00000599223 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
IRF3-223ENST00000599223 A0A087WZ39 114 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 IGHV3OR16-9A0A0B4J2B5 98 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 SMIM1B2RUZ4 78 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 BATFQ16520 125 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 C1orf137Q5JT78 98 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 C2orf91Q6ZV80 131 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
IRF3-223ENST00000599223 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
IRF3-223ENST00000599223 PRSS2P07478 247 aa8.93□□□□□ -0.98
IRF3-223ENST00000599223 LBHQ53QV2 105 aaPredicted RBP8.93□□□□□ -0.98
IRF3-223ENST00000599223 C10orf25Q5T742 122 aa8.93□□□□□ -0.98
IRF3-223ENST00000599223 SFTA2Q6UW10 78 aa8.93□□□□□ -0.98
IRF3-223ENST00000599223 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
IRF3-223ENST00000599223 TAL2Q16559 108 aa8.92□□□□□ -0.98
IRF3-223ENST00000599223 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
IRF3-223ENST00000599223 ORAOV1Q8WV07 137 aa8.92□□□□□ -0.98
IRF3-223ENST00000599223 HIST1H4GQ99525 98 aa8.92□□□□□ -0.98
IRF3-223ENST00000599223 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
IRF3-223ENST00000599223 TMEM238C9JI98 176 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 NDUFA1O15239 70 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 HINT1P49773 126 aaPredicted RBP8.91□□□□□ -0.98
IRF3-223ENST00000599223 HERV-K104P63124 156 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 RNF151Q2KHN1 245 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 KRTAP7-1Q8IUC3 87 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 PRR26Q8N8Z3 221 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
IRF3-223ENST00000599223 IGLV7-43P04211 117 aa8.9□□□□□ -0.98
IRF3-223ENST00000599223 C6orf48Q9UBA6 75 aa8.9□□□□□ -0.98
IRF3-223ENST00000599223 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
IRF3-223ENST00000599223 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
IRF3-223ENST00000599223 TMEM238LA0A1B0GVL6 79 aa8.88□□□□□ -0.99
IRF3-223ENST00000599223 A6NDN8 102 aa8.88□□□□□ -0.99
IRF3-223ENST00000599223 A6NJY4 79 aa8.88□□□□□ -0.99
IRF3-223ENST00000599223 COL5A1-AS1Q5SY13 56 aa8.88□□□□□ -0.99
IRF3-223ENST00000599223 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
IRF3-223ENST00000599223 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
IRF3-223ENST00000599223 COPS9Q8WXC6 57 aa8.88□□□□□ -0.99
IRF3-223ENST00000599223 SPANXB1Q9NS25 103 aaPredicted RBP8.88□□□□□ -0.99
IRF3-223ENST00000599223 A0A0J9YXY3 114 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 TIMM17BO60830 172 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 CXCL5P42830 114 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 CKS1BP61024 79 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 Q6ZVH6 145 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 Q8IZM0 81 aa8.87□□□□□ -0.99
IRF3-223ENST00000599223 H0Y9J4 135 aa8.86□□□□□ -0.99
IRF3-223ENST00000599223 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
IRF3-223ENST00000599223 TLX1NBP0CAT3 122 aa8.86□□□□□ -0.99
IRF3-223ENST00000599223 MEIG1Q5JSS6 88 aa8.86□□□□□ -0.99
IRF3-223ENST00000599223 CEND1Q8N111 149 aa8.86□□□□□ -0.99
IRF3-223ENST00000599223 DIRC1Q969H9 104 aa8.86□□□□□ -0.99
IRF3-223ENST00000599223 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
IRF3-223ENST00000599223 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
IRF3-223ENST00000599223 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
IRF3-223ENST00000599223 F8WDY8 70 aa8.83□□□□□ -1
IRF3-223ENST00000599223 M0QXV9 152 aa8.83□□□□□ -1
IRF3-223ENST00000599223 RPL24P83731 157 aaKnown RBP8.83□□□□□ -1
IRF3-223ENST00000599223 C2orf82Q6UX34 121 aa8.83□□□□□ -1
IRF3-223ENST00000599223 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
IRF3-223ENST00000599223 IFITM1P13164 125 aa8.82□□□□□ -1
IRF3-223ENST00000599223 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
IRF3-223ENST00000599223 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
IRF3-223ENST00000599223 SPANXCQ9NY87 97 aa8.82□□□□□ -1
IRF3-223ENST00000599223 MUC2Q02817 5179 aa8.81□□□□□ -1
IRF3-223ENST00000599223 SMIM13P0DJ93 91 aa8.81□□□□□ -1
IRF3-223ENST00000599223 FXYD2P54710 66 aa8.79□□□□□ -1
IRF3-223ENST00000599223 LINC00158P58513 81 aa8.79□□□□□ -1
IRF3-223ENST00000599223 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
IRF3-223ENST00000599223 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
IRF3-223ENST00000599223 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
IRF3-223ENST00000599223 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
IRF3-223ENST00000599223 UBE2BP63146 152 aa8.78□□□□□ -1
IRF3-223ENST00000599223 COX17Q14061 63 aa8.77□□□□□ -1.01
IRF3-223ENST00000599223 MUSTN1Q8IVN3 82 aa8.77□□□□□ -1.01
IRF3-223ENST00000599223 LITAFQ99732 161 aa8.77□□□□□ -1.01
IRF3-223ENST00000599223 ERG28Q9UKR5 140 aa8.77□□□□□ -1.01
IRF3-223ENST00000599223 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
IRF3-223ENST00000599223 PFN2P35080 140 aa8.75□□□□□ -1.01
IRF3-223ENST00000599223 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
IRF3-223ENST00000599223 RAB37Q96AX2 223 aa8.75□□□□□ -1.01
IRF3-223ENST00000599223 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
IRF3-223ENST00000599223 LINC00308Q8TCZ7 52 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms