RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 FAM19A2Q8N3H0 131 aa13.58□□□□□ -0.24
SSBP4-205ENST00000598159 TRGC2P03986 189 aa13.57□□□□□ -0.24
SSBP4-205ENST00000598159 FAM19A1Q7Z5A9 133 aa13.57□□□□□ -0.24
SSBP4-205ENST00000598159 TMEM238C9JI98 176 aa13.56□□□□□ -0.24
SSBP4-205ENST00000598159 ATP6V1G1O75348 118 aa13.56□□□□□ -0.24
SSBP4-205ENST00000598159 PRR4Q16378 134 aa13.56□□□□□ -0.24
SSBP4-205ENST00000598159 Q8NDZ9 215 aa13.56□□□□□ -0.24
SSBP4-205ENST00000598159 ANAPC11Q9NYG5 84 aa13.56□□□□□ -0.24
SSBP4-205ENST00000598159 M0R378 163 aa13.55□□□□□ -0.24
SSBP4-205ENST00000598159 HERV-K104P63124 156 aa13.55□□□□□ -0.24
SSBP4-205ENST00000598159 FAM229BQ4G0N7 80 aa13.55□□□□□ -0.24
SSBP4-205ENST00000598159 A0A0U1RRA0 63 aa13.54□□□□□ -0.24
SSBP4-205ENST00000598159 LINC00587B1AMM8 73 aa13.54□□□□□ -0.24
SSBP4-205ENST00000598159 TSPAN13O95857 204 aa13.54□□□□□ -0.24
SSBP4-205ENST00000598159 PRLHP81277 87 aa13.54□□□□□ -0.24
SSBP4-205ENST00000598159 LEPROTL1O95214 131 aa13.52□□□□□ -0.25
SSBP4-205ENST00000598159 SMIM13P0DJ93 91 aa13.52□□□□□ -0.25
SSBP4-205ENST00000598159 LPAP08519 4548 aa13.52□□□□□ -0.25
SSBP4-205ENST00000598159 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
SSBP4-205ENST00000598159 KRTAP13-2Q52LG2 175 aa13.5□□□□□ -0.25
SSBP4-205ENST00000598159 MYMXA0A1B0GTQ4 84 aa13.49□□□□□ -0.25
SSBP4-205ENST00000598159 H0Y8G0 127 aa13.49□□□□□ -0.25
SSBP4-205ENST00000598159 SERF1AO75920 110 aa13.49□□□□□ -0.25
SSBP4-205ENST00000598159 NDUFA12Q9UI09 145 aa13.49□□□□□ -0.25
SSBP4-205ENST00000598159 PLEKHB2Q96CS7 222 aa13.48□□□□□ -0.25
SSBP4-205ENST00000598159 IGKV2D-26A0A0A0MRZ7 120 aa13.47□□□□□ -0.25
SSBP4-205ENST00000598159 BOD1L2Q8IYS8 172 aa13.47□□□□□ -0.25
SSBP4-205ENST00000598159 MIR7-3HGQ8N6C7 128 aa13.47□□□□□ -0.25
SSBP4-205ENST00000598159 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
SSBP4-205ENST00000598159 LINC00310P59036 64 aa13.46□□□□□ -0.25
SSBP4-205ENST00000598159 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.25
SSBP4-205ENST00000598159 HSPB8Q9UJY1 196 aa13.46□□□□□ -0.25
SSBP4-205ENST00000598159 PLNP26678 52 aa13.45□□□□□ -0.26
SSBP4-205ENST00000598159 LEPROTO15243 131 aa13.44□□□□□ -0.26
SSBP4-205ENST00000598159 HIGD2AQ9BW72 106 aa13.43□□□□□ -0.26
SSBP4-205ENST00000598159 COLCA2A8K830 154 aa13.42□□□□□ -0.26
SSBP4-205ENST00000598159 FABP4P15090 132 aa13.42□□□□□ -0.26
SSBP4-205ENST00000598159 CTAG1AP78358 180 aa13.42□□□□□ -0.26
SSBP4-205ENST00000598159 LINC00304Q8N9R0 145 aa13.42□□□□□ -0.26
SSBP4-205ENST00000598159 PRYO14603 147 aa13.41□□□□□ -0.26
SSBP4-205ENST00000598159 KCNQ1DNQ9H478 68 aa13.41□□□□□ -0.26
SSBP4-205ENST00000598159 DPM2O94777 84 aa13.4□□□□□ -0.26
SSBP4-205ENST00000598159 LOC107984156A0A0G2JMH3 177 aa13.39□□□□□ -0.27
SSBP4-205ENST00000598159 NCR3O14931 201 aa13.39□□□□□ -0.27
SSBP4-205ENST00000598159 HERVK_113P61574 105 aa13.39□□□□□ -0.27
SSBP4-205ENST00000598159 ARL17AQ8IVW1 177 aa13.39□□□□□ -0.27
SSBP4-205ENST00000598159 J3QQQ9 107 aa13.38□□□□□ -0.27
SSBP4-205ENST00000598159 SPRR1AP35321 89 aa13.38□□□□□ -0.27
SSBP4-205ENST00000598159 TSPEAR-AS2P59090 65 aa13.38□□□□□ -0.27
SSBP4-205ENST00000598159 LINC00337Q8N6G1 96 aa13.38□□□□□ -0.27
SSBP4-205ENST00000598159 IGKCP01834 107 aa13.37□□□□□ -0.27
SSBP4-205ENST00000598159 NMUP48645 174 aa13.37□□□□□ -0.27
SSBP4-205ENST00000598159 S100A12P80511 92 aa13.36□□□□□ -0.27
SSBP4-205ENST00000598159 SPRR4Q96PI1 79 aa13.36□□□□□ -0.27
SSBP4-205ENST00000598159 ZNF706Q9Y5V0 76 aaPredicted RBP13.36□□□□□ -0.27
SSBP4-205ENST00000598159 PMCHL2Q9BQD1 86 aa13.35□□□□□ -0.27
SSBP4-205ENST00000598159 TRBV10-3A0A0K0K1G6 114 aa13.34□□□□□ -0.27
SSBP4-205ENST00000598159 LGALS3P17931 250 aaKnown RBP13.34□□□□□ -0.27
SSBP4-205ENST00000598159 ETDCA0A1B0GVM5 59 aa13.33□□□□□ -0.28
SSBP4-205ENST00000598159 KRTAP4-16G5E9R7 235 aaPredicted RBP13.33□□□□□ -0.28
SSBP4-205ENST00000598159 C3orf22Q8N5N4 141 aa13.33□□□□□ -0.28
SSBP4-205ENST00000598159 DAND5Q8N907 189 aa13.33□□□□□ -0.28
SSBP4-205ENST00000598159 TRBV10-2A0A0K0K1G8 114 aa13.32□□□□□ -0.28
SSBP4-205ENST00000598159 SMCR5Q8TEV8 140 aa13.32□□□□□ -0.28
SSBP4-205ENST00000598159 SPAG11AQ6PDA7 123 aa13.31□□□□□ -0.28
SSBP4-205ENST00000598159 MIEN1Q9BRT3 115 aa13.3□□□□□ -0.28
SSBP4-205ENST00000598159 DDTP30046 118 aa13.28□□□□□ -0.28
SSBP4-205ENST00000598159 RETNLBQ9BQ08 111 aa13.28□□□□□ -0.28
SSBP4-205ENST00000598159 NDUFC2O95298 119 aa13.27□□□□□ -0.29
SSBP4-205ENST00000598159 SPANXB1Q9NS25 103 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-205ENST00000598159 E9PLD3 99 aa13.26□□□□□ -0.29
SSBP4-205ENST00000598159 B5MCH6 92 aa13.25□□□□□ -0.29
SSBP4-205ENST00000598159 C4orf48Q5BLP8 95 aa13.25□□□□□ -0.29
SSBP4-205ENST00000598159 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 SYS1-DBNDD2H3BUS1 97 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BKO60814 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BJP06899 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BOP23527 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BBP33778 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BDP58876 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BCP62807 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST2H2BEQ16778 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.23□□□□□ -0.29
SSBP4-205ENST00000598159 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BHQ93079 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BNQ99877 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 HIST1H2BMQ99879 126 aa13.23□□□□□ -0.29
SSBP4-205ENST00000598159 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
SSBP4-205ENST00000598159 IGLV7-46A0A075B6I9 117 aa13.21□□□□□ -0.29
SSBP4-205ENST00000598159 IGLV6-57P01721 117 aa13.21□□□□□ -0.29
SSBP4-205ENST00000598159 LINC00483Q53H64 154 aa13.21□□□□□ -0.29
SSBP4-205ENST00000598159 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
SSBP4-205ENST00000598159 TPRXLQ17RH7 258 aa13.19□□□□□ -0.3
SSBP4-205ENST00000598159 GAGE2AQ6NT46 116 aa13.19□□□□□ -0.3
SSBP4-205ENST00000598159 SOSTDC1Q6X4U4 206 aa13.18□□□□□ -0.3
SSBP4-205ENST00000598159 Q6ZRX8 168 aa13.18□□□□□ -0.3
SSBP4-205ENST00000598159 Q8NBF4 154 aa13.18□□□□□ -0.3
SSBP4-205ENST00000598159 ERC2-IT1O76042 136 aa13.17□□□□□ -0.3
SSBP4-205ENST00000598159 LINC01545Q5VT33 79 aa13.17□□□□□ -0.3
SSBP4-205ENST00000598159 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms