RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
CCDC9-202ENST00000595659 LINC00158P58513 81 aa9.92□□□□□ -0.82
CCDC9-202ENST00000595659 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
CCDC9-202ENST00000595659 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
CCDC9-202ENST00000595659 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
CCDC9-202ENST00000595659 CBLN2Q8IUK8 224 aa9.9□□□□□ -0.82
CCDC9-202ENST00000595659 HIGD2AQ9BW72 106 aa9.89□□□□□ -0.83
CCDC9-202ENST00000595659 PLEKHB2Q96CS7 222 aa9.88□□□□□ -0.83
CCDC9-202ENST00000595659 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
CCDC9-202ENST00000595659 SNAPINO95295 136 aa9.87□□□□□ -0.83
CCDC9-202ENST00000595659 SFTA2Q6UW10 78 aa9.87□□□□□ -0.83
CCDC9-202ENST00000595659 C3orf22Q8N5N4 141 aa9.87□□□□□ -0.83
CCDC9-202ENST00000595659 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
CCDC9-202ENST00000595659 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
CCDC9-202ENST00000595659 SVBPQ8N300 66 aa9.86□□□□□ -0.83
CCDC9-202ENST00000595659 NDUFA5Q16718 116 aa9.85□□□□□ -0.83
CCDC9-202ENST00000595659 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
CCDC9-202ENST00000595659 YPEL4Q96NS1 127 aa9.84□□□□□ -0.83
CCDC9-202ENST00000595659 TRAV12-1A0A0B4J245 112 aa9.83□□□□□ -0.84
CCDC9-202ENST00000595659 NCR3O14931 201 aa9.83□□□□□ -0.84
CCDC9-202ENST00000595659 ATP6V1G1O75348 118 aa9.83□□□□□ -0.84
CCDC9-202ENST00000595659 MEIG1Q5JSS6 88 aa9.83□□□□□ -0.84
CCDC9-202ENST00000595659 BOD1L2Q8IYS8 172 aa9.83□□□□□ -0.84
CCDC9-202ENST00000595659 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
CCDC9-202ENST00000595659 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
CCDC9-202ENST00000595659 H0Y8G0 127 aa9.81□□□□□ -0.84
CCDC9-202ENST00000595659 SPRR4Q96PI1 79 aa9.81□□□□□ -0.84
CCDC9-202ENST00000595659 IGLV7-46A0A075B6I9 117 aa9.8□□□□□ -0.84
CCDC9-202ENST00000595659 HSBP1O75506 76 aa9.79□□□□□ -0.84
CCDC9-202ENST00000595659 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
CCDC9-202ENST00000595659 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
CCDC9-202ENST00000595659 PRYO14603 147 aa9.77□□□□□ -0.85
CCDC9-202ENST00000595659 PPDPFQ9H3Y8 114 aa9.77□□□□□ -0.85
CCDC9-202ENST00000595659 A0A0U1RQV1 116 aa9.76□□□□□ -0.85
CCDC9-202ENST00000595659 HERV-K104P63124 156 aa9.76□□□□□ -0.85
CCDC9-202ENST00000595659 DAND5Q8N907 189 aa9.76□□□□□ -0.85
CCDC9-202ENST00000595659 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
CCDC9-202ENST00000595659 MUC17Q685J3 4493 aa9.75□□□□□ -0.85
CCDC9-202ENST00000595659 TRBV10-3A0A0K0K1G6 114 aa9.75□□□□□ -0.85
CCDC9-202ENST00000595659 TSPEAR-AS2P59090 65 aa9.75□□□□□ -0.85
CCDC9-202ENST00000595659 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
CCDC9-202ENST00000595659 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
CCDC9-202ENST00000595659 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
CCDC9-202ENST00000595659 KCNQ1DNQ9H478 68 aa9.74□□□□□ -0.85
CCDC9-202ENST00000595659 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
CCDC9-202ENST00000595659 TRGC2P03986 189 aa9.73□□□□□ -0.85
CCDC9-202ENST00000595659 SPRR1AP35321 89 aa9.73□□□□□ -0.85
CCDC9-202ENST00000595659 SPAG11AQ6PDA7 123 aa9.73□□□□□ -0.85
CCDC9-202ENST00000595659 LINC00337Q8N6G1 96 aa9.73□□□□□ -0.85
CCDC9-202ENST00000595659 LINC00587B1AMM8 73 aa9.72□□□□□ -0.85
CCDC9-202ENST00000595659 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
CCDC9-202ENST00000595659 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
CCDC9-202ENST00000595659 Q8NBF4 154 aa9.72□□□□□ -0.85
CCDC9-202ENST00000595659 MAP1LC3CQ9BXW4 147 aa9.72□□□□□ -0.85
CCDC9-202ENST00000595659 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.85
CCDC9-202ENST00000595659 SERF1AO75920 110 aa9.71□□□□□ -0.86
CCDC9-202ENST00000595659 LEPROTL1O95214 131 aa9.71□□□□□ -0.86
CCDC9-202ENST00000595659 LINC00310P59036 64 aa9.71□□□□□ -0.86
CCDC9-202ENST00000595659 LEPROTO15243 131 aa9.7□□□□□ -0.86
CCDC9-202ENST00000595659 FABP4P15090 132 aa9.7□□□□□ -0.86
CCDC9-202ENST00000595659 CTAG1AP78358 180 aa9.7□□□□□ -0.86
CCDC9-202ENST00000595659 GAGE2AQ6NT46 116 aa9.7□□□□□ -0.86
CCDC9-202ENST00000595659 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
CCDC9-202ENST00000595659 ERC2-IT1O76042 136 aa9.69□□□□□ -0.86
CCDC9-202ENST00000595659 B5MCH6 92 aa9.68□□□□□ -0.86
CCDC9-202ENST00000595659 J3QQQ9 107 aa9.67□□□□□ -0.86
CCDC9-202ENST00000595659 DDTP30046 118 aa9.67□□□□□ -0.86
CCDC9-202ENST00000595659 DPM2O94777 84 aa9.66□□□□□ -0.86
CCDC9-202ENST00000595659 PLNP26678 52 aa9.66□□□□□ -0.86
CCDC9-202ENST00000595659 S100A12P80511 92 aa9.66□□□□□ -0.86
CCDC9-202ENST00000595659 IGLV9-49A0A0B4J1Y8 123 aa9.65□□□□□ -0.86
CCDC9-202ENST00000595659 LINC00483Q53H64 154 aa9.65□□□□□ -0.86
CCDC9-202ENST00000595659 HSPB8Q9UJY1 196 aa9.65□□□□□ -0.86
CCDC9-202ENST00000595659 LGALS3P17931 250 aaKnown RBP9.64□□□□□ -0.87
CCDC9-202ENST00000595659 HERVK_113P61574 105 aa9.64□□□□□ -0.87
CCDC9-202ENST00000595659 MOBPQ13875 183 aa9.64□□□□□ -0.87
CCDC9-202ENST00000595659 Q9BRP9 147 aa9.64□□□□□ -0.87
CCDC9-202ENST00000595659 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
CCDC9-202ENST00000595659 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
CCDC9-202ENST00000595659 IGKCP01834 107 aa9.63□□□□□ -0.87
CCDC9-202ENST00000595659 NPC2P61916 151 aa9.63□□□□□ -0.87
CCDC9-202ENST00000595659 LCE2AQ5TA79 106 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-202ENST00000595659 FP248Q71RG6 208 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-202ENST00000595659 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
CCDC9-202ENST00000595659 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
CCDC9-202ENST00000595659 S100A7L2Q5SY68 101 aa9.62□□□□□ -0.87
CCDC9-202ENST00000595659 EIF4EBP3O60516 100 aaPredicted RBP9.61□□□□□ -0.87
CCDC9-202ENST00000595659 SPINK1P00995 79 aa9.61□□□□□ -0.87
CCDC9-202ENST00000595659 SPANXB1Q9NS25 103 aaPredicted RBP9.61□□□□□ -0.87
CCDC9-202ENST00000595659 NMUP48645 174 aa9.6□□□□□ -0.87
CCDC9-202ENST00000595659 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
CCDC9-202ENST00000595659 ADAMTSL4-AS1Q5T5F5 129 aa9.6□□□□□ -0.87
CCDC9-202ENST00000595659 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
CCDC9-202ENST00000595659 Q6ZRX8 168 aa9.6□□□□□ -0.87
CCDC9-202ENST00000595659 SLC7A5P1Q8MH63 180 aa9.6□□□□□ -0.87
CCDC9-202ENST00000595659 KRTAP9-2Q9BYQ4 174 aa9.59□□□□□ -0.87
CCDC9-202ENST00000595659 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
CCDC9-202ENST00000595659 COLCA2A8K830 154 aa9.58□□□□□ -0.88
CCDC9-202ENST00000595659 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
CCDC9-202ENST00000595659 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms