RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 COMMD7Q86VX2 200 aa10.99□□□□□ -0.65
CCDC43-205ENST00000592333 URB1-AS1Q96HZ7 61 aa10.99□□□□□ -0.65
CCDC43-205ENST00000592333 M0R378 163 aa10.97□□□□□ -0.65
CCDC43-205ENST00000592333 SCO1O75880 301 aa10.97□□□□□ -0.65
CCDC43-205ENST00000592333 BAGE3Q86Y29 109 aa10.97□□□□□ -0.65
CCDC43-205ENST00000592333 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
CCDC43-205ENST00000592333 PRLHP81277 87 aa10.96□□□□□ -0.65
CCDC43-205ENST00000592333 TMEM170BQ5T4T1 132 aa10.96□□□□□ -0.65
CCDC43-205ENST00000592333 C11orf86A6NJI1 115 aa10.95□□□□□ -0.66
CCDC43-205ENST00000592333 PLEKHB2Q96CS7 222 aa10.95□□□□□ -0.66
CCDC43-205ENST00000592333 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
CCDC43-205ENST00000592333 TPRXLQ17RH7 258 aa10.94□□□□□ -0.66
CCDC43-205ENST00000592333 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
CCDC43-205ENST00000592333 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
CCDC43-205ENST00000592333 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
CCDC43-205ENST00000592333 CHTOPQ9Y3Y2 248 aaKnown RBP10.92□□□□□ -0.66
CCDC43-205ENST00000592333 PMCHL1Q16048 86 aa10.91□□□□□ -0.66
CCDC43-205ENST00000592333 LINC00158P58513 81 aa10.9□□□□□ -0.66
CCDC43-205ENST00000592333 Q8NDZ9 215 aa10.9□□□□□ -0.66
CCDC43-205ENST00000592333 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
CCDC43-205ENST00000592333 TMEM223A0PJW6 202 aa10.89□□□□□ -0.67
CCDC43-205ENST00000592333 LINC00587B1AMM8 73 aa10.89□□□□□ -0.67
CCDC43-205ENST00000592333 ZNF706Q9Y5V0 76 aaPredicted RBP10.89□□□□□ -0.67
CCDC43-205ENST00000592333 SNAPINO95295 136 aa10.88□□□□□ -0.67
CCDC43-205ENST00000592333 IGLV7-46A0A075B6I9 117 aa10.87□□□□□ -0.67
CCDC43-205ENST00000592333 HERV-K104P63124 156 aa10.87□□□□□ -0.67
CCDC43-205ENST00000592333 SVBPQ8N300 66 aa10.87□□□□□ -0.67
CCDC43-205ENST00000592333 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
CCDC43-205ENST00000592333 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
CCDC43-205ENST00000592333 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
CCDC43-205ENST00000592333 ATP6V1G1O75348 118 aa10.86□□□□□ -0.67
CCDC43-205ENST00000592333 NDUFA5Q16718 116 aa10.86□□□□□ -0.67
CCDC43-205ENST00000592333 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
CCDC43-205ENST00000592333 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
CCDC43-205ENST00000592333 PRYO14603 147 aa10.85□□□□□ -0.67
CCDC43-205ENST00000592333 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
CCDC43-205ENST00000592333 KCNQ1DNQ9H478 68 aa10.85□□□□□ -0.67
CCDC43-205ENST00000592333 APOC3P02656 99 aa10.84□□□□□ -0.67
CCDC43-205ENST00000592333 SPRR1AP35321 89 aa10.84□□□□□ -0.67
CCDC43-205ENST00000592333 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
CCDC43-205ENST00000592333 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
CCDC43-205ENST00000592333 SMIM13P0DJ93 91 aa10.81□□□□□ -0.68
CCDC43-205ENST00000592333 BOD1L2Q8IYS8 172 aa10.81□□□□□ -0.68
CCDC43-205ENST00000592333 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
CCDC43-205ENST00000592333 S100A12P80511 92 aa10.8□□□□□ -0.68
CCDC43-205ENST00000592333 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
CCDC43-205ENST00000592333 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
CCDC43-205ENST00000592333 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
CCDC43-205ENST00000592333 MYMXA0A1B0GTQ4 84 aa10.79□□□□□ -0.68
CCDC43-205ENST00000592333 MIR7-3HGQ8N6C7 128 aa10.79□□□□□ -0.68
CCDC43-205ENST00000592333 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
CCDC43-205ENST00000592333 LOC107984156A0A0G2JMH3 177 aa10.78□□□□□ -0.68
CCDC43-205ENST00000592333 KRTAP4-16G5E9R7 235 aaPredicted RBP10.78□□□□□ -0.68
CCDC43-205ENST00000592333 ARL17AQ8IVW1 177 aa10.78□□□□□ -0.68
CCDC43-205ENST00000592333 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
CCDC43-205ENST00000592333 LOC100996750A0A140TA64 210 aa10.77□□□□□ -0.69
CCDC43-205ENST00000592333 HSBP1O75506 76 aa10.77□□□□□ -0.69
CCDC43-205ENST00000592333 KRTAP4-6Q9BYQ5 205 aa10.77□□□□□ -0.69
CCDC43-205ENST00000592333 ETDCA0A1B0GVM5 59 aa10.76□□□□□ -0.69
CCDC43-205ENST00000592333 SPINK1P00995 79 aa10.76□□□□□ -0.69
CCDC43-205ENST00000592333 LINC00483Q53H64 154 aa10.76□□□□□ -0.69
CCDC43-205ENST00000592333 SMCR5Q8TEV8 140 aa10.75□□□□□ -0.69
CCDC43-205ENST00000592333 FAT4Q6V0I7 4981 aa10.74□□□□□ -0.69
CCDC43-205ENST00000592333 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
CCDC43-205ENST00000592333 NCR3O14931 201 aa10.74□□□□□ -0.69
CCDC43-205ENST00000592333 TRBV10-3A0A0K0K1G6 114 aa10.73□□□□□ -0.69
CCDC43-205ENST00000592333 RPS29P62273 56 aaKnown RBP10.73□□□□□ -0.69
CCDC43-205ENST00000592333 Q8NBF4 154 aa10.73□□□□□ -0.69
CCDC43-205ENST00000592333 MUC17Q685J3 4493 aa10.73□□□□□ -0.69
CCDC43-205ENST00000592333 LEPROTO15243 131 aa10.71□□□□□ -0.69
CCDC43-205ENST00000592333 PLNP26678 52 aa10.71□□□□□ -0.69
CCDC43-205ENST00000592333 NMUP48645 174 aa10.7□□□□□ -0.7
CCDC43-205ENST00000592333 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
CCDC43-205ENST00000592333 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
CCDC43-205ENST00000592333 B5MCH6 92 aa10.69□□□□□ -0.7
CCDC43-205ENST00000592333 LEPROTL1O95214 131 aa10.69□□□□□ -0.7
CCDC43-205ENST00000592333 KRTAP9-2Q9BYQ4 174 aa10.69□□□□□ -0.7
CCDC43-205ENST00000592333 DDTP30046 118 aa10.68□□□□□ -0.7
CCDC43-205ENST00000592333 KRTAP13-3Q3SY46 172 aa10.68□□□□□ -0.7
CCDC43-205ENST00000592333 DAND5Q8N907 189 aa10.68□□□□□ -0.7
CCDC43-205ENST00000592333 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
CCDC43-205ENST00000592333 NDUFC2O95298 119 aa10.67□□□□□ -0.7
CCDC43-205ENST00000592333 J3QQQ9 107 aa10.66□□□□□ -0.7
CCDC43-205ENST00000592333 HERVK_113P61574 105 aa10.66□□□□□ -0.7
CCDC43-205ENST00000592333 Q6ZRX8 168 aa10.66□□□□□ -0.7
CCDC43-205ENST00000592333 MIEN1Q9BRT3 115 aa10.66□□□□□ -0.7
CCDC43-205ENST00000592333 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
CCDC43-205ENST00000592333 ASB16-AS1Q495Z4 193 aa10.65□□□□□ -0.7
CCDC43-205ENST00000592333 GAGE2AQ6NT46 116 aa10.65□□□□□ -0.7
CCDC43-205ENST00000592333 H0Y8G0 127 aa10.64□□□□□ -0.71
CCDC43-205ENST00000592333 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
CCDC43-205ENST00000592333 JOSD1Q15040 202 aaPredicted RBP10.64□□□□□ -0.71
CCDC43-205ENST00000592333 C5orf52A6NGY3 159 aa10.63□□□□□ -0.71
CCDC43-205ENST00000592333 DPM2O94777 84 aa10.63□□□□□ -0.71
CCDC43-205ENST00000592333 IGLV6-57P01721 117 aa10.63□□□□□ -0.71
CCDC43-205ENST00000592333 TRGC2P03986 189 aa10.63□□□□□ -0.71
CCDC43-205ENST00000592333 Q9BRP9 147 aa10.62□□□□□ -0.71
CCDC43-205ENST00000592333 CBY1Q9Y3M2 126 aa10.62□□□□□ -0.71
CCDC43-205ENST00000592333 SLC25A20O43772 301 aa10.61□□□□□ -0.71
CCDC43-205ENST00000592333 SERF1AO75920 110 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms