RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 TSPAN13O95857 204 aa10.85□□□□□ -0.67
CIRBP-237ENST00000592234 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
CIRBP-237ENST00000592234 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
CIRBP-237ENST00000592234 CRYGAP11844 174 aa10.84□□□□□ -0.67
CIRBP-237ENST00000592234 FABP4P15090 132 aa10.83□□□□□ -0.68
CIRBP-237ENST00000592234 LINC00158P58513 81 aa10.83□□□□□ -0.68
CIRBP-237ENST00000592234 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
CIRBP-237ENST00000592234 VPREB1P12018 145 aa10.82□□□□□ -0.68
CIRBP-237ENST00000592234 S100A1P23297 94 aa10.82□□□□□ -0.68
CIRBP-237ENST00000592234 UBE2AP49459 152 aa10.82□□□□□ -0.68
CIRBP-237ENST00000592234 COX17Q14061 63 aa10.82□□□□□ -0.68
CIRBP-237ENST00000592234 Q8NDZ9 215 aa10.82□□□□□ -0.68
CIRBP-237ENST00000592234 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
CIRBP-237ENST00000592234 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
CIRBP-237ENST00000592234 PMCHL2Q9BQD1 86 aa10.8□□□□□ -0.68
CIRBP-237ENST00000592234 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
CIRBP-237ENST00000592234 RPL24P83731 157 aaKnown RBP10.79□□□□□ -0.68
CIRBP-237ENST00000592234 ANAPC11Q9NYG5 84 aa10.79□□□□□ -0.68
CIRBP-237ENST00000592234 KRTAP13-1Q8IUC0 172 aa10.78□□□□□ -0.68
CIRBP-237ENST00000592234 HSPB8Q9UJY1 196 aa10.78□□□□□ -0.68
CIRBP-237ENST00000592234 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
CIRBP-237ENST00000592234 TSPEAR-AS2P59090 65 aa10.76□□□□□ -0.69
CIRBP-237ENST00000592234 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
CIRBP-237ENST00000592234 PRLHP81277 87 aa10.74□□□□□ -0.69
CIRBP-237ENST00000592234 KRTAP13-2Q52LG2 175 aa10.74□□□□□ -0.69
CIRBP-237ENST00000592234 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
CIRBP-237ENST00000592234 MIR7-3HGQ8N6C7 128 aa10.74□□□□□ -0.69
CIRBP-237ENST00000592234 DPM2O94777 84 aa10.73□□□□□ -0.69
CIRBP-237ENST00000592234 PLNP26678 52 aa10.73□□□□□ -0.69
CIRBP-237ENST00000592234 HERV-K104P63124 156 aa10.73□□□□□ -0.69
CIRBP-237ENST00000592234 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
CIRBP-237ENST00000592234 TMEM126AQ9H061 195 aa10.73□□□□□ -0.69
CIRBP-237ENST00000592234 MUC2Q02817 5179 aa10.73□□□□□ -0.69
CIRBP-237ENST00000592234 MYMXA0A1B0GTQ4 84 aa10.72□□□□□ -0.69
CIRBP-237ENST00000592234 LEPROTO15243 131 aa10.72□□□□□ -0.69
CIRBP-237ENST00000592234 IGKCP01834 107 aa10.72□□□□□ -0.69
CIRBP-237ENST00000592234 BOD1L2Q8IYS8 172 aa10.72□□□□□ -0.69
CIRBP-237ENST00000592234 M0R378 163 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 NCR3O14931 201 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BKO60814 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BJP06899 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BOP23527 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BBP33778 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BDP58876 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BCP62807 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST2H2BEQ16778 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BHQ93079 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BNQ99877 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 HIST1H2BMQ99879 126 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 MAP1LC3CQ9BXW4 147 aa10.71□□□□□ -0.69
CIRBP-237ENST00000592234 IGKV2D-26A0A0A0MRZ7 120 aa10.7□□□□□ -0.7
CIRBP-237ENST00000592234 HERVK_113P61574 105 aa10.7□□□□□ -0.7
CIRBP-237ENST00000592234 DAND5Q8N907 189 aa10.7□□□□□ -0.7
CIRBP-237ENST00000592234 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
CIRBP-237ENST00000592234 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
CIRBP-237ENST00000592234 A0A0U1RQV1 116 aa10.68□□□□□ -0.7
CIRBP-237ENST00000592234 J3QQQ9 107 aa10.68□□□□□ -0.7
CIRBP-237ENST00000592234 RETNLBQ9BQ08 111 aa10.68□□□□□ -0.7
CIRBP-237ENST00000592234 LGALS3P17931 250 aaKnown RBP10.67□□□□□ -0.7
CIRBP-237ENST00000592234 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
CIRBP-237ENST00000592234 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
CIRBP-237ENST00000592234 SYS1-DBNDD2H3BUS1 97 aa10.63□□□□□ -0.71
CIRBP-237ENST00000592234 NMUP48645 174 aa10.62□□□□□ -0.71
CIRBP-237ENST00000592234 NPC2P61916 151 aa10.61□□□□□ -0.71
CIRBP-237ENST00000592234 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
CIRBP-237ENST00000592234 PRYO14603 147 aa10.6□□□□□ -0.71
CIRBP-237ENST00000592234 CTAG1AP78358 180 aa10.6□□□□□ -0.71
CIRBP-237ENST00000592234 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
CIRBP-237ENST00000592234 E9PLD3 99 aa10.59□□□□□ -0.71
CIRBP-237ENST00000592234 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
CIRBP-237ENST00000592234 MIEN1Q9BRT3 115 aa10.58□□□□□ -0.72
CIRBP-237ENST00000592234 CDIP1Q9H305 208 aa10.58□□□□□ -0.72
CIRBP-237ENST00000592234 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
CIRBP-237ENST00000592234 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
CIRBP-237ENST00000592234 LINC01545Q5VT33 79 aa10.57□□□□□ -0.72
CIRBP-237ENST00000592234 PET117Q6UWS5 81 aa10.57□□□□□ -0.72
CIRBP-237ENST00000592234 KCNQ1DNQ9H478 68 aa10.57□□□□□ -0.72
CIRBP-237ENST00000592234 ETDCA0A1B0GVM5 59 aa10.56□□□□□ -0.72
CIRBP-237ENST00000592234 C3orf79P0CE67 100 aa10.56□□□□□ -0.72
CIRBP-237ENST00000592234 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
CIRBP-237ENST00000592234 LOC107984156A0A0G2JMH3 177 aa10.55□□□□□ -0.72
CIRBP-237ENST00000592234 DDTP30046 118 aa10.55□□□□□ -0.72
CIRBP-237ENST00000592234 KRTDAPP60985 99 aa10.55□□□□□ -0.72
CIRBP-237ENST00000592234 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
CIRBP-237ENST00000592234 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
CIRBP-237ENST00000592234 ARL17AQ8IVW1 177 aa10.55□□□□□ -0.72
CIRBP-237ENST00000592234 MUC17Q685J3 4493 aa10.54□□□□□ -0.72
CIRBP-237ENST00000592234 EIF4EBP3O60516 100 aaPredicted RBP10.54□□□□□ -0.72
CIRBP-237ENST00000592234 SPRR1AP35321 89 aa10.54□□□□□ -0.72
CIRBP-237ENST00000592234 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
CIRBP-237ENST00000592234 ZNF706Q9Y5V0 76 aaPredicted RBP10.54□□□□□ -0.72
CIRBP-237ENST00000592234 SPAG11AQ6PDA7 123 aa10.53□□□□□ -0.72
CIRBP-237ENST00000592234 TTTY13Q9BZ97 58 aa10.53□□□□□ -0.72
CIRBP-237ENST00000592234 SPANXB1Q9NS25 103 aaPredicted RBP10.53□□□□□ -0.72
CIRBP-237ENST00000592234 S100A12P80511 92 aa10.52□□□□□ -0.73
CIRBP-237ENST00000592234 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
CIRBP-237ENST00000592234 SMCR5Q8TEV8 140 aa10.52□□□□□ -0.73
CIRBP-237ENST00000592234 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
CIRBP-237ENST00000592234 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms