RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 FAM19A2Q8N3H0 131 aa4.69□□□□□ -1.66
VMP1-213ENST00000591877 LINC00526Q96FQ7 95 aa4.69□□□□□ -1.66
VMP1-213ENST00000591877 C20orf78Q9BR46 151 aa4.69□□□□□ -1.66
VMP1-213ENST00000591877 GEMIN7Q9H840 131 aaKnown RBP4.69□□□□□ -1.66
VMP1-213ENST00000591877 PLAC8Q9NZF1 115 aa4.69□□□□□ -1.66
VMP1-213ENST00000591877 K7EMI3 77 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 LEPROTL1O95214 131 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 ZNF664Q8N3J9 261 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 Q8N8P6 123 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 FAM104AQ969W3 186 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 TMEM101Q96IK0 257 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 HSPB8Q9UJY1 196 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 UBE2D4Q9Y2X8 147 aa4.68□□□□□ -1.66
VMP1-213ENST00000591877 A0A096LNI7 61 aa4.67□□□□□ -1.66
VMP1-213ENST00000591877 LOC389332A0A1B0GUA5 103 aa4.67□□□□□ -1.66
VMP1-213ENST00000591877 HBDP02042 147 aa4.67□□□□□ -1.66
VMP1-213ENST00000591877 C3orf79P0CE67 100 aa4.67□□□□□ -1.66
VMP1-213ENST00000591877 SS18Q15532 418 aa4.67□□□□□ -1.66
VMP1-213ENST00000591877 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
VMP1-213ENST00000591877 DPH3Q96FX2 82 aa4.67□□□□□ -1.66
VMP1-213ENST00000591877 A0A096LNJ9 63 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 IGHV1-58A0A0C4DH39 117 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 IGKV2-24A0A0C4DH68 120 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 FCER1GP30273 86 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 KRTDAPP60985 99 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 S100A12P80511 92 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 PMCHL1Q16048 86 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 TEX43Q6ZNM6 134 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 Q6ZUT4 128 aa4.66□□□□□ -1.66
VMP1-213ENST00000591877 C20orf202A1L168 122 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 LINC01549A6NIU2 74 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 TCAPO15273 167 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 RPL39P62891 51 aaKnown RBP4.65□□□□□ -1.67
VMP1-213ENST00000591877 ORMDL2Q53FV1 153 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 CARD19Q96LW7 228 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 TIMM21Q9BVV7 248 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 MAP1LC3CQ9BXW4 147 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.67
VMP1-213ENST00000591877 IGLV4-69A0A075B6H9 119 aa4.64□□□□□ -1.67
VMP1-213ENST00000591877 SYS1-DBNDD2H3BUS1 97 aa4.64□□□□□ -1.67
VMP1-213ENST00000591877 G0S2P27469 103 aa4.64□□□□□ -1.67
VMP1-213ENST00000591877 SYCNQ0VAF6 134 aa4.64□□□□□ -1.67
VMP1-213ENST00000591877 Q6ZRU5 148 aa4.64□□□□□ -1.67
VMP1-213ENST00000591877 LINC00173Q6ZV60 143 aa4.64□□□□□ -1.67
VMP1-213ENST00000591877 TRAV13-1A0A0B4J241 112 aa4.63□□□□□ -1.67
VMP1-213ENST00000591877 TSTD3H0UI37 97 aa4.63□□□□□ -1.67
VMP1-213ENST00000591877 COX7A2LO14548 114 aa4.63□□□□□ -1.67
VMP1-213ENST00000591877 PRR3P79522 188 aaKnown RBP4.63□□□□□ -1.67
VMP1-213ENST00000591877 C5orf38Q86SI9 138 aa4.63□□□□□ -1.67
VMP1-213ENST00000591877 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
VMP1-213ENST00000591877 CHTOPQ9Y3Y2 248 aaKnown RBP4.63□□□□□ -1.67
VMP1-213ENST00000591877 LINC01545Q5VT33 79 aa4.62□□□□□ -1.67
VMP1-213ENST00000591877 C7orf33Q8WU49 177 aa4.62□□□□□ -1.67
VMP1-213ENST00000591877 TOMM6Q96B49 74 aa4.62□□□□□ -1.67
VMP1-213ENST00000591877 VAMP8Q9BV40 100 aa4.62□□□□□ -1.67
VMP1-213ENST00000591877 IGHV3OR16-9A0A0B4J2B5 98 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 A0A1W2PNN7 141 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.61□□□□□ -1.67
VMP1-213ENST00000591877 MRPS36P82909 103 aaKnown RBP4.61□□□□□ -1.67
VMP1-213ENST00000591877 SMAGPQ0VAQ4 97 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 Q6ZN92 141 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 NKAPP1Q8N9T2 125 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 TYMSOSQ8TAI1 123 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 CAMK2N2Q96S95 79 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 LINC00474Q9P2X8 69 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 CYSLTR1Q9Y271 337 aa4.61□□□□□ -1.67
VMP1-213ENST00000591877 A0A0J9YXV3 536 aa4.6□□□□□ -1.67
VMP1-213ENST00000591877 LOC107984640A0A0U1RRK4 108 aa4.6□□□□□ -1.67
VMP1-213ENST00000591877 SPAG11BQ08648 103 aa4.6□□□□□ -1.67
VMP1-213ENST00000591877 SPANXA1Q9NS26 97 aa4.6□□□□□ -1.67
VMP1-213ENST00000591877 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 APOMO95445 188 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 SPATA45Q537H7 98 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 TMEM141Q96I45 108 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 LINC01600Q96MT4 127 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 SCGB3A1Q96QR1 104 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 TIMM17AQ99595 171 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 PKIGQ9Y2B9 76 aa4.59□□□□□ -1.67
VMP1-213ENST00000591877 HSBP1L1C9JCN9 74 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 TSPAN13O95857 204 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 KIAA0087Q14695 138 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 C9orf116Q5BN46 136 aaPredicted RBP4.58□□□□□ -1.68
VMP1-213ENST00000591877 UNQ6190/PRO20217Q6UXQ8 127 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 ATOH7Q8N100 152 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 ORAOV1Q8WV07 137 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 PRO1933Q9H354 126 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 MRPL35Q9NZE8 188 aaKnown RBP4.58□□□□□ -1.68
VMP1-213ENST00000591877 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
VMP1-213ENST00000591877 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 IGIPA6NJ69 53 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 DPM2O94777 84 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 DDTP30046 118 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 RPL18AQ02543 176 aaKnown RBP4.57□□□□□ -1.68
VMP1-213ENST00000591877 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
VMP1-213ENST00000591877 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
VMP1-213ENST00000591877 TNXBP22105 4242 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms