RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OR13C6PQ8NH95 151 aa6.95□□□□□ -1.3
VPS25-203ENST00000589520 CAMK2N2Q96S95 79 aa6.95□□□□□ -1.3
VPS25-203ENST00000589520 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
VPS25-203ENST00000589520 SMIM11BQ8TCY0 68 aa6.94□□□□□ -1.3
VPS25-203ENST00000589520 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
VPS25-203ENST00000589520 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
VPS25-203ENST00000589520 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
VPS25-203ENST00000589520 MTURNQ8N3F0 131 aa6.93□□□□□ -1.3
VPS25-203ENST00000589520 C6orf48Q9UBA6 75 aa6.93□□□□□ -1.3
VPS25-203ENST00000589520 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
VPS25-203ENST00000589520 DNAL4O96015 105 aa6.91□□□□□ -1.3
VPS25-203ENST00000589520 C9orf116Q5BN46 136 aaPredicted RBP6.91□□□□□ -1.3
VPS25-203ENST00000589520 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
VPS25-203ENST00000589520 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
VPS25-203ENST00000589520 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.3
VPS25-203ENST00000589520 H3BQ85 93 aa6.89□□□□□ -1.31
VPS25-203ENST00000589520 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
VPS25-203ENST00000589520 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
VPS25-203ENST00000589520 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
VPS25-203ENST00000589520 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
VPS25-203ENST00000589520 NUPR2A6NF83 97 aa6.88□□□□□ -1.31
VPS25-203ENST00000589520 Q6ZRU5 148 aa6.88□□□□□ -1.31
VPS25-203ENST00000589520 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
VPS25-203ENST00000589520 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
VPS25-203ENST00000589520 HYDINQ4G0P3 5121 aa6.87□□□□□ -1.31
VPS25-203ENST00000589520 GHRHP01286 108 aa6.87□□□□□ -1.31
VPS25-203ENST00000589520 IGLV6-57P01721 117 aa6.87□□□□□ -1.31
VPS25-203ENST00000589520 FAM218AQ96MZ4 157 aa6.87□□□□□ -1.31
VPS25-203ENST00000589520 SIGMAR1Q99720 223 aa6.87□□□□□ -1.31
VPS25-203ENST00000589520 Q9HAA7 133 aa6.87□□□□□ -1.31
VPS25-203ENST00000589520 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
VPS25-203ENST00000589520 M0R378 163 aa6.86□□□□□ -1.31
VPS25-203ENST00000589520 ACYP1P07311 99 aa6.86□□□□□ -1.31
VPS25-203ENST00000589520 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
VPS25-203ENST00000589520 FAM240AA0A1B0GVK7 77 aa6.85□□□□□ -1.31
VPS25-203ENST00000589520 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
VPS25-203ENST00000589520 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
VPS25-203ENST00000589520 LINC00167Q96N53 147 aa6.85□□□□□ -1.31
VPS25-203ENST00000589520 ORMDL1Q9P0S3 153 aa6.85□□□□□ -1.31
VPS25-203ENST00000589520 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
VPS25-203ENST00000589520 PCLOQ9Y6V0 5065 aa6.84□□□□□ -1.31
VPS25-203ENST00000589520 TEX49A0A1B0GTD5 131 aa6.84□□□□□ -1.31
VPS25-203ENST00000589520 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
VPS25-203ENST00000589520 NCR3O14931 201 aa6.84□□□□□ -1.31
VPS25-203ENST00000589520 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.32
VPS25-203ENST00000589520 A0A087WYN8 130 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 TMEM256-PLSCR3K7ERE1 68 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 LECT2O14960 151 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 VPREB1P12018 145 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
VPS25-203ENST00000589520 C14orf177Q52M58 125 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 TTC32Q5I0X7 151 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 Q8N814 137 aa6.83□□□□□ -1.32
VPS25-203ENST00000589520 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 C6orf99Q4VX62 202 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 LINC00575Q6W349 94 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 DIRC1Q969H9 104 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 XAGE1AQ9HD64 81 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 PKIGQ9Y2B9 76 aa6.82□□□□□ -1.32
VPS25-203ENST00000589520 JMJD7-PLA2G4BH0Y9G9 81 aa6.81□□□□□ -1.32
VPS25-203ENST00000589520 GAGE2EQ4V326 116 aa6.81□□□□□ -1.32
VPS25-203ENST00000589520 Q6ZRP5 223 aa6.81□□□□□ -1.32
VPS25-203ENST00000589520 Q8NDZ9 215 aa6.81□□□□□ -1.32
VPS25-203ENST00000589520 GAGE2DQ9UEU5 116 aa6.81□□□□□ -1.32
VPS25-203ENST00000589520 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
VPS25-203ENST00000589520 TRBV10-3A0A0K0K1G6 114 aa6.8□□□□□ -1.32
VPS25-203ENST00000589520 hADV29S1A0JD25 119 aa6.8□□□□□ -1.32
VPS25-203ENST00000589520 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
VPS25-203ENST00000589520 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
VPS25-203ENST00000589520 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
VPS25-203ENST00000589520 ZNF73O43830 326 aaPredicted RBP6.79□□□□□ -1.32
VPS25-203ENST00000589520 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
VPS25-203ENST00000589520 NKAPP1Q8N9T2 125 aa6.79□□□□□ -1.32
VPS25-203ENST00000589520 OBSCN-AS1Q96MR7 158 aa6.79□□□□□ -1.32
VPS25-203ENST00000589520 RYR2Q92736 4967 aa6.78□□□□□ -1.32
VPS25-203ENST00000589520 PSCAO43653 123 aa6.78□□□□□ -1.32
VPS25-203ENST00000589520 COX7BP24311 80 aa6.78□□□□□ -1.32
VPS25-203ENST00000589520 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
VPS25-203ENST00000589520 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.78□□□□□ -1.32
VPS25-203ENST00000589520 SLPIP03973 132 aa6.77□□□□□ -1.33
VPS25-203ENST00000589520 ELOF1P60002 83 aaKnown RBP6.77□□□□□ -1.33
VPS25-203ENST00000589520 C9orf129Q5T035 196 aaKnown RBP6.77□□□□□ -1.33
VPS25-203ENST00000589520 KCNQ1DNQ9H478 68 aa6.77□□□□□ -1.33
VPS25-203ENST00000589520 C22orf24Q9Y442 160 aa6.77□□□□□ -1.33
VPS25-203ENST00000589520 RYR1P21817 5038 aa6.76□□□□□ -1.33
VPS25-203ENST00000589520 NBDYA0A0U1RRE5 68 aa6.75□□□□□ -1.33
VPS25-203ENST00000589520 CASC10Q5T4H9 136 aa6.75□□□□□ -1.33
VPS25-203ENST00000589520 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
VPS25-203ENST00000589520 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
VPS25-203ENST00000589520 PDE6GP18545 87 aa6.74□□□□□ -1.33
VPS25-203ENST00000589520 PCP4P48539 62 aa6.74□□□□□ -1.33
VPS25-203ENST00000589520 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
VPS25-203ENST00000589520 C16orf90A8MZG2 172 aa6.73□□□□□ -1.33
VPS25-203ENST00000589520 PRYO14603 147 aa6.73□□□□□ -1.33
VPS25-203ENST00000589520 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
VPS25-203ENST00000589520 Q6Q795 121 aa6.72□□□□□ -1.33
VPS25-203ENST00000589520 C7orf33Q8WU49 177 aa6.72□□□□□ -1.33
VPS25-203ENST00000589520 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
VPS25-203ENST00000589520 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms