RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 HIGD2BQ4VC39 106 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 TIMM21Q9BVV7 248 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 VCX2Q9H322 139 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 UBE2D4Q9Y2X8 147 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.66□□□□□ -1.66
CCDC47-205ENST00000582331 MYMXA0A1B0GTQ4 84 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 IGKV2-29A2NJV5 120 aaPredicted RBP4.66□□□□□ -1.66
CCDC47-205ENST00000582331 GAGE12HA6NDE8 117 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 ZNF561-AS1K7EIQ3 104 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 ZNF22P17026 224 aaPredicted RBP4.66□□□□□ -1.66
CCDC47-205ENST00000582331 MRPS36P82909 103 aaKnown RBP4.66□□□□□ -1.66
CCDC47-205ENST00000582331 PRR4Q16378 134 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 TAL2Q16559 108 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 PKIGQ9Y2B9 76 aa4.66□□□□□ -1.66
CCDC47-205ENST00000582331 TMEM223A0PJW6 202 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 FXYD2P54710 66 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 HERVK_113P61574 105 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 Q6ZUT4 128 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 PRR26Q8N8Z3 221 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 PLEKHB2Q96CS7 222 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 TMEM243Q9BU79 118 aa4.65□□□□□ -1.67
CCDC47-205ENST00000582331 GVQW2A0A096LPI5 108 aaPredicted RBP4.64□□□□□ -1.67
CCDC47-205ENST00000582331 ZNF815PA8K554 130 aa4.64□□□□□ -1.67
CCDC47-205ENST00000582331 H3BRM9 83 aa4.64□□□□□ -1.67
CCDC47-205ENST00000582331 LEPROTO15243 131 aa4.64□□□□□ -1.67
CCDC47-205ENST00000582331 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
CCDC47-205ENST00000582331 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
CCDC47-205ENST00000582331 CEND1Q8N111 149 aa4.64□□□□□ -1.67
CCDC47-205ENST00000582331 OR5A1Q8NGJ0 315 aa4.64□□□□□ -1.67
CCDC47-205ENST00000582331 IGKV3OR2-268A0A0C4DH90 116 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 A6NDN8 102 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 J3QQQ9 107 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 UBE2L6O14933 153 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 UBE2D1P51668 147 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 FAM19A3Q7Z5A8 133 aa4.63□□□□□ -1.67
CCDC47-205ENST00000582331 CSDC2Q9Y534 153 aaKnown RBP4.63□□□□□ -1.67
CCDC47-205ENST00000582331 IGLV5-45A0A087WSX0 123 aa4.62□□□□□ -1.67
CCDC47-205ENST00000582331 CCL25O15444 150 aa4.62□□□□□ -1.67
CCDC47-205ENST00000582331 SMIM13P0DJ93 91 aa4.62□□□□□ -1.67
CCDC47-205ENST00000582331 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
CCDC47-205ENST00000582331 CHCHD10Q8WYQ3 142 aaPredicted RBP4.62□□□□□ -1.67
CCDC47-205ENST00000582331 DIRC1Q969H9 104 aa4.62□□□□□ -1.67
CCDC47-205ENST00000582331 A0A1B0GWB2 263 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 H7C423 109 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 LGALS3P17931 250 aaKnown RBP4.61□□□□□ -1.67
CCDC47-205ENST00000582331 C1orf137Q5JT78 98 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 LINC00242Q5T6M2 205 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 CARD19Q96LW7 228 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 HIST1H4GQ99525 98 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 CDC42SE2Q9NRR3 84 aa4.61□□□□□ -1.67
CCDC47-205ENST00000582331 SPANXB1Q9NS25 103 aaPredicted RBP4.61□□□□□ -1.67
CCDC47-205ENST00000582331 IGLV1-50A0A075B6I6 118 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 IGHV1-58A0A0C4DH39 117 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 A0A1W2PNN7 141 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 PTTG1IPP53801 180 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 SMAGPQ0VAQ4 97 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 VAMP3Q15836 100 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 AMMECR1LQ6DCA0 310 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 LINC00526Q96FQ7 95 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 CDKN2A-AS1Q9UH64 79 aa4.6□□□□□ -1.67
CCDC47-205ENST00000582331 IGLV5-39A0A0G2JS06 123 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 H3BUT2 72 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 K7ERJ3 54 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 SPINK8P0C7L1 97 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 SYCNQ0VAF6 134 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 FOXI1Q12951 378 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 SCGB1D4Q6XE38 83 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 RAB37Q96AX2 223 aa4.59□□□□□ -1.67
CCDC47-205ENST00000582331 NAA38Q9BRA0 125 aaKnown RBP4.59□□□□□ -1.67
CCDC47-205ENST00000582331 GEMIN7Q9H840 131 aaKnown RBP4.59□□□□□ -1.67
CCDC47-205ENST00000582331 NHP2Q9NX24 153 aaKnown RBP4.59□□□□□ -1.67
CCDC47-205ENST00000582331 A0A0J9YXY3 114 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 LOC107984640A0A0U1RRK4 108 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 H0Y9J4 135 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 IGLV7-43P04211 117 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 HERVK_113P63121 156 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 LITAFQ99732 161 aa4.58□□□□□ -1.68
CCDC47-205ENST00000582331 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
CCDC47-205ENST00000582331 A0A1W2PPM0 123 aa4.57□□□□□ -1.68
CCDC47-205ENST00000582331 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
CCDC47-205ENST00000582331 K7EP34 96 aa4.57□□□□□ -1.68
CCDC47-205ENST00000582331 RPL13AP40429 203 aaKnown RBP4.57□□□□□ -1.68
CCDC47-205ENST00000582331 XCL1P47992 114 aa4.57□□□□□ -1.68
CCDC47-205ENST00000582331 C9orf116Q5BN46 136 aaPredicted RBP4.57□□□□□ -1.68
CCDC47-205ENST00000582331 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
CCDC47-205ENST00000582331 NDUFA12Q9UI09 145 aa4.57□□□□□ -1.68
CCDC47-205ENST00000582331 GAGE10A6NGK3 116 aa4.56□□□□□ -1.68
CCDC47-205ENST00000582331 SMIM1B2RUZ4 78 aa4.56□□□□□ -1.68
CCDC47-205ENST00000582331 ADAMTSL4-AS1Q5T5F5 129 aa4.56□□□□□ -1.68
CCDC47-205ENST00000582331 MUSTN1Q8IVN3 82 aa4.56□□□□□ -1.68
CCDC47-205ENST00000582331 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
CCDC47-205ENST00000582331 A0A087WZ39 114 aa4.55□□□□□ -1.68
CCDC47-205ENST00000582331 LINC00959A0A1B0GUT2 108 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms