RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 LINC00158P58513 81 aa10.25□□□□□ -0.77
MKS1-209ENST00000580127 UQCC3Q6UW78 93 aa10.25□□□□□ -0.77
MKS1-209ENST00000580127 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
MKS1-209ENST00000580127 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
MKS1-209ENST00000580127 KRTAP9-6A0A140TA67 174 aa10.23□□□□□ -0.77
MKS1-209ENST00000580127 SPRR4Q96PI1 79 aa10.23□□□□□ -0.77
MKS1-209ENST00000580127 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
MKS1-209ENST00000580127 LINC00614P0C842 121 aa10.22□□□□□ -0.77
MKS1-209ENST00000580127 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
MKS1-209ENST00000580127 SEC11CQ9BY50 192 aa10.22□□□□□ -0.77
MKS1-209ENST00000580127 HBDP02042 147 aa10.21□□□□□ -0.77
MKS1-209ENST00000580127 S100A12P80511 92 aa10.21□□□□□ -0.77
MKS1-209ENST00000580127 CLLU1Q5K131 121 aa10.21□□□□□ -0.77
MKS1-209ENST00000580127 SPINK1P00995 79 aa10.2□□□□□ -0.78
MKS1-209ENST00000580127 LINC01547P58512 204 aaPredicted RBP10.2□□□□□ -0.78
MKS1-209ENST00000580127 NDUFA12Q9UI09 145 aa10.2□□□□□ -0.78
MKS1-209ENST00000580127 PRYO14603 147 aa10.18□□□□□ -0.78
MKS1-209ENST00000580127 Q8NBF4 154 aa10.18□□□□□ -0.78
MKS1-209ENST00000580127 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
MKS1-209ENST00000580127 LINC00587B1AMM8 73 aa10.17□□□□□ -0.78
MKS1-209ENST00000580127 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
MKS1-209ENST00000580127 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
MKS1-209ENST00000580127 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
MKS1-209ENST00000580127 Q8NDZ9 215 aa10.16□□□□□ -0.78
MKS1-209ENST00000580127 A0A0U1RRA0 63 aa10.15□□□□□ -0.78
MKS1-209ENST00000580127 BOD1L2Q8IYS8 172 aa10.15□□□□□ -0.78
MKS1-209ENST00000580127 DAND5Q8N907 189 aa10.15□□□□□ -0.78
MKS1-209ENST00000580127 SMCR5Q8TEV8 140 aa10.15□□□□□ -0.78
MKS1-209ENST00000580127 CHTOPQ9Y3Y2 248 aaKnown RBP10.15□□□□□ -0.78
MKS1-209ENST00000580127 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.78
MKS1-209ENST00000580127 A0A096LNJ9 63 aa10.14□□□□□ -0.79
MKS1-209ENST00000580127 KRTAP13-3Q3SY46 172 aa10.14□□□□□ -0.79
MKS1-209ENST00000580127 KCNQ1DNQ9H478 68 aa10.14□□□□□ -0.79
MKS1-209ENST00000580127 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
MKS1-209ENST00000580127 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
MKS1-209ENST00000580127 C18orf32Q8TCD1 76 aa10.13□□□□□ -0.79
MKS1-209ENST00000580127 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
MKS1-209ENST00000580127 HERV-K104P63124 156 aa10.12□□□□□ -0.79
MKS1-209ENST00000580127 RHEBQ15382 184 aa10.12□□□□□ -0.79
MKS1-209ENST00000580127 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
MKS1-209ENST00000580127 MAP1LC3CQ9BXW4 147 aa10.12□□□□□ -0.79
MKS1-209ENST00000580127 SSBP3-AS1Q7Z2R9 100 aa10.11□□□□□ -0.79
MKS1-209ENST00000580127 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
MKS1-209ENST00000580127 SMIM13P0DJ93 91 aa10.1□□□□□ -0.79
MKS1-209ENST00000580127 NCR3O14931 201 aa10.09□□□□□ -0.79
MKS1-209ENST00000580127 SPRR1AP35321 89 aa10.09□□□□□ -0.79
MKS1-209ENST00000580127 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
MKS1-209ENST00000580127 URB1-AS1Q96HZ7 61 aa10.09□□□□□ -0.79
MKS1-209ENST00000580127 SLC25A20O43772 301 aa10.08□□□□□ -0.8
MKS1-209ENST00000580127 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
MKS1-209ENST00000580127 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
MKS1-209ENST00000580127 MIR7-3HGQ8N6C7 128 aa10.08□□□□□ -0.8
MKS1-209ENST00000580127 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
MKS1-209ENST00000580127 MUC17Q685J3 4493 aa10.06□□□□□ -0.8
MKS1-209ENST00000580127 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
MKS1-209ENST00000580127 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
MKS1-209ENST00000580127 TRBV10-3A0A0K0K1G6 114 aa10.05□□□□□ -0.8
MKS1-209ENST00000580127 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
MKS1-209ENST00000580127 KRTAP4-16G5E9R7 235 aaPredicted RBP10.04□□□□□ -0.8
MKS1-209ENST00000580127 MOBPQ13875 183 aa10.04□□□□□ -0.8
MKS1-209ENST00000580127 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
MKS1-209ENST00000580127 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
MKS1-209ENST00000580127 B5MCH6 92 aa10.02□□□□□ -0.81
MKS1-209ENST00000580127 DDTP30046 118 aa10.01□□□□□ -0.81
MKS1-209ENST00000580127 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
MKS1-209ENST00000580127 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
MKS1-209ENST00000580127 Q8N377 158 aa10.01□□□□□ -0.81
MKS1-209ENST00000580127 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
MKS1-209ENST00000580127 IFITM2Q01629 132 aa10□□□□□ -0.81
MKS1-209ENST00000580127 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
MKS1-209ENST00000580127 MIEN1Q9BRT3 115 aa9.99□□□□□ -0.81
MKS1-209ENST00000580127 S100A7L2Q5SY68 101 aa9.98□□□□□ -0.81
MKS1-209ENST00000580127 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
MKS1-209ENST00000580127 Q6ZRX8 168 aa9.97□□□□□ -0.81
MKS1-209ENST00000580127 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
MKS1-209ENST00000580127 ERC2-IT1O76042 136 aa9.96□□□□□ -0.82
MKS1-209ENST00000580127 C9orf153Q5TBE3 101 aa9.96□□□□□ -0.82
MKS1-209ENST00000580127 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
MKS1-209ENST00000580127 XP32Q5T750 250 aa9.95□□□□□ -0.82
MKS1-209ENST00000580127 KRTAP4-1Q9BYQ7 146 aa9.95□□□□□ -0.82
MKS1-209ENST00000580127 SPANXB1Q9NS25 103 aaPredicted RBP9.95□□□□□ -0.82
MKS1-209ENST00000580127 HSBP1O75506 76 aa9.94□□□□□ -0.82
MKS1-209ENST00000580127 SNAPINO95295 136 aa9.94□□□□□ -0.82
MKS1-209ENST00000580127 HINT1P49773 126 aaPredicted RBP9.94□□□□□ -0.82
MKS1-209ENST00000580127 NDUFA5Q16718 116 aa9.94□□□□□ -0.82
MKS1-209ENST00000580127 LEPROTO15243 131 aa9.93□□□□□ -0.82
MKS1-209ENST00000580127 Q9BRP9 147 aa9.93□□□□□ -0.82
MKS1-209ENST00000580127 C5orf52A6NGY3 159 aa9.92□□□□□ -0.82
MKS1-209ENST00000580127 H0Y8G0 127 aa9.92□□□□□ -0.82
MKS1-209ENST00000580127 APOC3P02656 99 aa9.92□□□□□ -0.82
MKS1-209ENST00000580127 NDUFC2O95298 119 aa9.91□□□□□ -0.82
MKS1-209ENST00000580127 PLNP26678 52 aa9.91□□□□□ -0.82
MKS1-209ENST00000580127 NMUP48645 174 aa9.91□□□□□ -0.82
MKS1-209ENST00000580127 HERVK_113P61574 105 aa9.91□□□□□ -0.82
MKS1-209ENST00000580127 SVBPQ8N300 66 aa9.91□□□□□ -0.82
MKS1-209ENST00000580127 SLC25A34Q6PIV7 304 aa9.9□□□□□ -0.82
MKS1-209ENST00000580127 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
MKS1-209ENST00000580127 J3QQQ9 107 aa9.89□□□□□ -0.83
MKS1-209ENST00000580127 IGLV6-57P01721 117 aa9.89□□□□□ -0.83
MKS1-209ENST00000580127 LGALS3P17931 250 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms