RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CELA1Q9UNI1 258 aa9.5□□□□□ -0.89
NDEL1-204ENST00000578172 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
NDEL1-204ENST00000578172 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
NDEL1-204ENST00000578172 SMCR5Q8TEV8 140 aa9.5□□□□□ -0.89
NDEL1-204ENST00000578172 DEFB105AQ8NG35 78 aa9.5□□□□□ -0.89
NDEL1-204ENST00000578172 KRTAP10-3P60369 221 aa9.49□□□□□ -0.89
NDEL1-204ENST00000578172 SPAG11BQ08648 103 aa9.49□□□□□ -0.89
NDEL1-204ENST00000578172 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
NDEL1-204ENST00000578172 FAM19A1Q7Z5A9 133 aa9.48□□□□□ -0.89
NDEL1-204ENST00000578172 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
NDEL1-204ENST00000578172 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
NDEL1-204ENST00000578172 PKD1L1Q8TDX9 2849 aa9.47□□□□□ -0.89
NDEL1-204ENST00000578172 A0A087WZ39 114 aa9.47□□□□□ -0.89
NDEL1-204ENST00000578172 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
NDEL1-204ENST00000578172 TRRAPQ9Y4A5 3859 aa9.46□□□□□ -0.9
NDEL1-204ENST00000578172 TRBV7-7A0A0K0K1E9 115 aa9.46□□□□□ -0.9
NDEL1-204ENST00000578172 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
NDEL1-204ENST00000578172 CSNK1G2-AS1Q8NCQ2 148 aa9.46□□□□□ -0.9
NDEL1-204ENST00000578172 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.9
NDEL1-204ENST00000578172 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
NDEL1-204ENST00000578172 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
NDEL1-204ENST00000578172 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
NDEL1-204ENST00000578172 TMEM258P61165 79 aa9.44□□□□□ -0.9
NDEL1-204ENST00000578172 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
NDEL1-204ENST00000578172 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
NDEL1-204ENST00000578172 X6R8D5 127 aa9.43□□□□□ -0.9
NDEL1-204ENST00000578172 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
NDEL1-204ENST00000578172 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
NDEL1-204ENST00000578172 IL17DQ8TAD2 202 aa9.43□□□□□ -0.9
NDEL1-204ENST00000578172 TMEM256-PLSCR3K7ERE1 68 aa9.42□□□□□ -0.9
NDEL1-204ENST00000578172 IGKV2D-24A0A075B6R9 120 aa9.41□□□□□ -0.9
NDEL1-204ENST00000578172 APOC4P55056 127 aa9.41□□□□□ -0.9
NDEL1-204ENST00000578172 SPART-AS1P0CW21 52 aa9.41□□□□□ -0.9
NDEL1-204ENST00000578172 C9orf66Q5T8R8 295 aa9.41□□□□□ -0.9
NDEL1-204ENST00000578172 CYSRT1A8MQ03 144 aa9.4□□□□□ -0.9
NDEL1-204ENST00000578172 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.91
NDEL1-204ENST00000578172 CAMK2N2Q96S95 79 aa9.39□□□□□ -0.91
NDEL1-204ENST00000578172 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
NDEL1-204ENST00000578172 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
NDEL1-204ENST00000578172 Q6ZQY7 126 aa9.38□□□□□ -0.91
NDEL1-204ENST00000578172 PRR4Q16378 134 aa9.37□□□□□ -0.91
NDEL1-204ENST00000578172 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
NDEL1-204ENST00000578172 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
NDEL1-204ENST00000578172 F8WEM9 126 aa9.37□□□□□ -0.91
NDEL1-204ENST00000578172 Q6JHZ5 121 aa9.36□□□□□ -0.91
NDEL1-204ENST00000578172 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
NDEL1-204ENST00000578172 Q8IZM0 81 aa9.35□□□□□ -0.91
NDEL1-204ENST00000578172 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
NDEL1-204ENST00000578172 RMI2Q96E14 147 aa9.34□□□□□ -0.91
NDEL1-204ENST00000578172 NREPQ16612 68 aa9.34□□□□□ -0.91
NDEL1-204ENST00000578172 C16orf95Q9H693 158 aa9.34□□□□□ -0.91
NDEL1-204ENST00000578172 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
NDEL1-204ENST00000578172 Q6ZTC4 211 aa9.33□□□□□ -0.92
NDEL1-204ENST00000578172 TRBV10-3A0A0K0K1G6 114 aa9.33□□□□□ -0.92
NDEL1-204ENST00000578172 Q8NDZ9 215 aa9.33□□□□□ -0.92
NDEL1-204ENST00000578172 Q8N814 137 aa9.32□□□□□ -0.92
NDEL1-204ENST00000578172 LYRM9A8MSI8 78 aa9.32□□□□□ -0.92
NDEL1-204ENST00000578172 CCKP06307 115 aa9.31□□□□□ -0.92
NDEL1-204ENST00000578172 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
NDEL1-204ENST00000578172 NDUFC2O95298 119 aa9.31□□□□□ -0.92
NDEL1-204ENST00000578172 CRYGAP11844 174 aa9.31□□□□□ -0.92
NDEL1-204ENST00000578172 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
NDEL1-204ENST00000578172 C22orf24Q9Y442 160 aa9.3□□□□□ -0.92
NDEL1-204ENST00000578172 Q8N9L7 120 aa9.29□□□□□ -0.92
NDEL1-204ENST00000578172 M0R2N4 97 aa9.28□□□□□ -0.92
NDEL1-204ENST00000578172 A0A1B0GUV1 79 aa9.28□□□□□ -0.92
NDEL1-204ENST00000578172 DIRC1Q969H9 104 aa9.28□□□□□ -0.92
NDEL1-204ENST00000578172 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.92
NDEL1-204ENST00000578172 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
NDEL1-204ENST00000578172 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
NDEL1-204ENST00000578172 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
NDEL1-204ENST00000578172 LELP1Q5T871 98 aa9.25□□□□□ -0.93
NDEL1-204ENST00000578172 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
NDEL1-204ENST00000578172 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 MIFP14174 115 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.24□□□□□ -0.93
NDEL1-204ENST00000578172 Q8NAQ8 132 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 BPY2O14599 106 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 C6orf48Q9UBA6 75 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 ANK3Q12955 4377 aaKnown RBP9.24□□□□□ -0.93
NDEL1-204ENST00000578172 ATP5EP2Q5VTU8 51 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 Q6ZRU5 148 aa9.24□□□□□ -0.93
NDEL1-204ENST00000578172 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
NDEL1-204ENST00000578172 DEFB131BA0A096LNP1 70 aa9.22□□□□□ -0.93
NDEL1-204ENST00000578172 COX7BP24311 80 aa9.22□□□□□ -0.93
NDEL1-204ENST00000578172 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
NDEL1-204ENST00000578172 KMT2BQ9UMN6 2715 aaPredicted RBP9.22□□□□□ -0.93
NDEL1-204ENST00000578172 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
NDEL1-204ENST00000578172 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
NDEL1-204ENST00000578172 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
NDEL1-204ENST00000578172 LINC00575Q6W349 94 aa9.2□□□□□ -0.94
NDEL1-204ENST00000578172 Q6ZVQ6 151 aa9.2□□□□□ -0.94
NDEL1-204ENST00000578172 TRAV10A0A0B4J240 114 aa9.19□□□□□ -0.94
NDEL1-204ENST00000578172 LINC01547P58512 204 aaPredicted RBP9.19□□□□□ -0.94
NDEL1-204ENST00000578172 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
NDEL1-204ENST00000578172 STAB2Q8WWQ8 2551 aa9.19□□□□□ -0.94
NDEL1-204ENST00000578172 C11orf45Q8TAV5 145 aa9.19□□□□□ -0.94
NDEL1-204ENST00000578172 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms