RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 IGLV5-39A0A0G2JS06 123 aa9.53□□□□□ -0.88
RNF43-202ENST00000577625 MDFIQ99750 246 aa9.53□□□□□ -0.88
RNF43-202ENST00000577625 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
RNF43-202ENST00000577625 A0A0U1RRA0 63 aa9.51□□□□□ -0.89
RNF43-202ENST00000577625 XCL1P47992 114 aa9.51□□□□□ -0.89
RNF43-202ENST00000577625 PRB2P02812 416 aaPredicted RBP9.51□□□□□ -0.89
RNF43-202ENST00000577625 COX6A2Q02221 97 aa9.51□□□□□ -0.89
RNF43-202ENST00000577625 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
RNF43-202ENST00000577625 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
RNF43-202ENST00000577625 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
RNF43-202ENST00000577625 SMIM26A0A096LP01 95 aa9.5□□□□□ -0.89
RNF43-202ENST00000577625 A0A096LPF7 62 aa9.5□□□□□ -0.89
RNF43-202ENST00000577625 C11orf68Q9H3H3 251 aaKnown RBP9.5□□□□□ -0.89
RNF43-202ENST00000577625 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
RNF43-202ENST00000577625 CRPP02741 224 aa9.49□□□□□ -0.89
RNF43-202ENST00000577625 HTN3P15516 51 aa9.49□□□□□ -0.89
RNF43-202ENST00000577625 A0A087WYN8 130 aa9.48□□□□□ -0.89
RNF43-202ENST00000577625 H0YGX0 51 aa9.48□□□□□ -0.89
RNF43-202ENST00000577625 H7BZZ5 65 aa9.48□□□□□ -0.89
RNF43-202ENST00000577625 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
RNF43-202ENST00000577625 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
RNF43-202ENST00000577625 K7EIL1 84 aa9.47□□□□□ -0.89
RNF43-202ENST00000577625 CCKP06307 115 aa9.47□□□□□ -0.89
RNF43-202ENST00000577625 KPRPQ5T749 579 aaPredicted RBP9.47□□□□□ -0.89
RNF43-202ENST00000577625 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
RNF43-202ENST00000577625 BCE1O60756 84 aa9.47□□□□□ -0.89
RNF43-202ENST00000577625 SEC61GP60059 68 aa9.47□□□□□ -0.89
RNF43-202ENST00000577625 V9GYY9 64 aa9.46□□□□□ -0.89
RNF43-202ENST00000577625 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
RNF43-202ENST00000577625 NCR3O14931 201 aa9.46□□□□□ -0.9
RNF43-202ENST00000577625 A0A0J9YWU9 116 aa9.45□□□□□ -0.9
RNF43-202ENST00000577625 LYPD5Q6UWN5 251 aa9.45□□□□□ -0.9
RNF43-202ENST00000577625 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
RNF43-202ENST00000577625 TRAV7A0A075B6U4 112 aa9.44□□□□□ -0.9
RNF43-202ENST00000577625 Q6ZTC4 211 aa9.44□□□□□ -0.9
RNF43-202ENST00000577625 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
RNF43-202ENST00000577625 SMIM11BQ8TCY0 68 aa9.44□□□□□ -0.9
RNF43-202ENST00000577625 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
RNF43-202ENST00000577625 FAM19A1Q7Z5A9 133 aa9.43□□□□□ -0.9
RNF43-202ENST00000577625 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
RNF43-202ENST00000577625 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
RNF43-202ENST00000577625 LECT2O14960 151 aa9.42□□□□□ -0.9
RNF43-202ENST00000577625 C1orf195Q5TG92 126 aa9.42□□□□□ -0.9
RNF43-202ENST00000577625 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
RNF43-202ENST00000577625 IGKV2-28A0A075B6P5 120 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 LINC00959A0A1B0GUT2 108 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 IGKV2D-28P01615 120 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 ORMDL1Q9P0S3 153 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 H3BNG1 76 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
RNF43-202ENST00000577625 LELP1Q5T871 98 aa9.4□□□□□ -0.9
RNF43-202ENST00000577625 SND1-IT1Q9HBX3 110 aa9.4□□□□□ -0.9
RNF43-202ENST00000577625 JMJD7-PLA2G4BH0Y9G9 81 aa9.4□□□□□ -0.91
RNF43-202ENST00000577625 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.91
RNF43-202ENST00000577625 SS18Q15532 418 aa9.39□□□□□ -0.91
RNF43-202ENST00000577625 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
RNF43-202ENST00000577625 A0A087WZ39 114 aa9.39□□□□□ -0.91
RNF43-202ENST00000577625 Q8N3U1 123 aa9.39□□□□□ -0.91
RNF43-202ENST00000577625 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
RNF43-202ENST00000577625 UBL5Q9BZL1 73 aa9.38□□□□□ -0.91
RNF43-202ENST00000577625 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
RNF43-202ENST00000577625 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
RNF43-202ENST00000577625 STAB2Q8WWQ8 2551 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 NDUFC1O43677 76 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 CLPSL2Q6UWE3 100 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 TRBV7-6A0A0J9YX20 115 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
RNF43-202ENST00000577625 SLPIP03973 132 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 LINC00269Q8N2A0 174 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
RNF43-202ENST00000577625 DEFB131BA0A096LNP1 70 aa9.35□□□□□ -0.91
RNF43-202ENST00000577625 F8WEM9 126 aa9.35□□□□□ -0.91
RNF43-202ENST00000577625 REG3AQ06141 175 aa9.34□□□□□ -0.91
RNF43-202ENST00000577625 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
RNF43-202ENST00000577625 RBM3P98179 157 aaKnown RBP9.34□□□□□ -0.91
RNF43-202ENST00000577625 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
RNF43-202ENST00000577625 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
RNF43-202ENST00000577625 RMI2Q96E14 147 aa9.33□□□□□ -0.92
RNF43-202ENST00000577625 LINC00474Q9P2X8 69 aa9.33□□□□□ -0.92
RNF43-202ENST00000577625 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
RNF43-202ENST00000577625 TOMM7Q9P0U1 55 aa9.32□□□□□ -0.92
RNF43-202ENST00000577625 SNURFQ9Y675 71 aa9.32□□□□□ -0.92
RNF43-202ENST00000577625 TMEM256-PLSCR3K7ERE1 68 aa9.31□□□□□ -0.92
RNF43-202ENST00000577625 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
RNF43-202ENST00000577625 CCL18P55774 89 aa9.31□□□□□ -0.92
RNF43-202ENST00000577625 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
RNF43-202ENST00000577625 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
RNF43-202ENST00000577625 LINC00158P58513 81 aa9.3□□□□□ -0.92
RNF43-202ENST00000577625 WFDC10BQ8IUB3 73 aa9.3□□□□□ -0.92
RNF43-202ENST00000577625 IGLV10-54A0A075B6I4 117 aa9.29□□□□□ -0.92
RNF43-202ENST00000577625 ESRGQ1W209 222 aa9.29□□□□□ -0.92
RNF43-202ENST00000577625 Q8IZM0 81 aa9.29□□□□□ -0.92
RNF43-202ENST00000577625 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
RNF43-202ENST00000577625 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
RNF43-202ENST00000577625 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
RNF43-202ENST00000577625 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
RNF43-202ENST00000577625 Q8N814 137 aa9.26□□□□□ -0.93
RNF43-202ENST00000577625 LINC01547P58512 204 aaPredicted RBP9.26□□□□□ -0.93
RNF43-202ENST00000577625 B9D2Q9BPU9 175 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms