RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 HSPG2P98160 4391 aa4.43□□□□□ -1.7
CASC3-205ENST00000577605 A0A1B0GV72 72 aa4.42□□□□□ -1.7
CASC3-205ENST00000577605 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
CASC3-205ENST00000577605 H3BRM9 83 aa4.42□□□□□ -1.7
CASC3-205ENST00000577605 HBDP02042 147 aa4.42□□□□□ -1.7
CASC3-205ENST00000577605 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
CASC3-205ENST00000577605 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
CASC3-205ENST00000577605 UNQ6190/PRO20217Q6UXQ8 127 aa4.42□□□□□ -1.7
CASC3-205ENST00000577605 C18orf32Q8TCD1 76 aa4.42□□□□□ -1.7
CASC3-205ENST00000577605 CHCHD1Q96BP2 118 aaKnown RBP4.42□□□□□ -1.7
CASC3-205ENST00000577605 A0A0J9YXV3 536 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 F8VRH5 84 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 SFTA2Q6UW10 78 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 YPEL4Q96NS1 127 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 C6orf48Q9UBA6 75 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
CASC3-205ENST00000577605 M0R143 59 aa4.4□□□□□ -1.71
CASC3-205ENST00000577605 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
CASC3-205ENST00000577605 C9orf116Q5BN46 136 aaPredicted RBP4.4□□□□□ -1.71
CASC3-205ENST00000577605 TOMM7Q9P0U1 55 aa4.4□□□□□ -1.71
CASC3-205ENST00000577605 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
CASC3-205ENST00000577605 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
CASC3-205ENST00000577605 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
CASC3-205ENST00000577605 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
CASC3-205ENST00000577605 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 TRAV12-1A0A0B4J245 112 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 A0A1W2PNN7 141 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 S100A2P29034 98 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 NDUFA6P56556 154 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 PYY3Q5JQD4 70 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 REG3GQ6UW15 175 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
CASC3-205ENST00000577605 A0A096LNJ9 63 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 COX17Q14061 63 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 VPS25Q9BRG1 176 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 V9GYY9 64 aa4.37□□□□□ -1.71
CASC3-205ENST00000577605 CBLN2Q8IUK8 224 aa4.36□□□□□ -1.71
CASC3-205ENST00000577605 IFI27L1Q96BM0 104 aa4.36□□□□□ -1.71
CASC3-205ENST00000577605 C20orf202A1L168 122 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 M0QXV9 152 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 NUPR1O60356 82 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 TRGC2P03986 189 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 UBE2BP63146 152 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
CASC3-205ENST00000577605 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 SNHG12Q9BXW3 62 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 PSORS1C2Q9UIG4 136 aa4.35□□□□□ -1.71
CASC3-205ENST00000577605 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 SPINK8P0C7L1 97 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 ZNF22P17026 224 aaPredicted RBP4.34□□□□□ -1.71
CASC3-205ENST00000577605 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 C1orf137Q5JT78 98 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 C9orf129Q5T035 196 aaKnown RBP4.34□□□□□ -1.71
CASC3-205ENST00000577605 TMEM170BQ5T4T1 132 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 FAM19A5Q7Z5A7 132 aaPredicted RBP4.34□□□□□ -1.71
CASC3-205ENST00000577605 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 HSPB8Q9UJY1 196 aa4.34□□□□□ -1.71
CASC3-205ENST00000577605 FAM168BA1KXE4 195 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 C11orf86A6NJI1 115 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 COLCA2A8K830 154 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 E9PLD3 99 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 K7ERU9 68 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 LEPROTL1O95214 131 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 IGLV7-43P04211 117 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
CASC3-205ENST00000577605 DNAH8Q96JB1 4490 aa4.32□□□□□ -1.72
CASC3-205ENST00000577605 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
CASC3-205ENST00000577605 PLNP26678 52 aa4.32□□□□□ -1.72
CASC3-205ENST00000577605 MRPL55Q7Z7F7 128 aaKnown RBP4.32□□□□□ -1.72
CASC3-205ENST00000577605 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
CASC3-205ENST00000577605 ERG28Q9UKR5 140 aa4.32□□□□□ -1.72
CASC3-205ENST00000577605 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
CASC3-205ENST00000577605 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
CASC3-205ENST00000577605 SERF1AO75920 110 aa4.31□□□□□ -1.72
CASC3-205ENST00000577605 COL5A1-AS1Q5SY13 56 aa4.31□□□□□ -1.72
CASC3-205ENST00000577605 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
CASC3-205ENST00000577605 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
CASC3-205ENST00000577605 FAT1Q14517 4588 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 H0Y9J4 135 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 ZNF861PO60384 105 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 PFN2P35080 140 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 RPL28P46779 137 aaKnown RBP4.3□□□□□ -1.72
CASC3-205ENST00000577605 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 HERVK_113P61574 105 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 JOSD1Q15040 202 aaPredicted RBP4.3□□□□□ -1.72
CASC3-205ENST00000577605 OCIAD2Q56VL3 154 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 BOD1L2Q8IYS8 172 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 ZNF625Q96I27 306 aaPredicted RBP4.3□□□□□ -1.72
CASC3-205ENST00000577605 PRO1933Q9H354 126 aa4.3□□□□□ -1.72
CASC3-205ENST00000577605 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 BCE1O60756 84 aa4.29□□□□□ -1.72
CASC3-205ENST00000577605 DPM2O94777 84 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms