RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
NPLOC4-219ENST00000576713 C6orf226Q5I0X4 101 aa5.91□□□□□ -1.46
NPLOC4-219ENST00000576713 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
NPLOC4-219ENST00000576713 DPH3Q96FX2 82 aa5.91□□□□□ -1.46
NPLOC4-219ENST00000576713 TRBV30A0A0K0K1B3 111 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 F8VRH5 84 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 F8WDY8 70 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 PRSS2P07478 247 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 COA6Q5JTJ3 125 aaKnown RBP5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 TMEM170BQ5T4T1 132 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 KRTAP11-1Q8IUC1 163 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
NPLOC4-219ENST00000576713 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
NPLOC4-219ENST00000576713 NDUFC2-KCTD14E9PQ53 114 aa5.89□□□□□ -1.47
NPLOC4-219ENST00000576713 CKS1BP61024 79 aa5.89□□□□□ -1.47
NPLOC4-219ENST00000576713 H3BRM9 83 aa5.88□□□□□ -1.47
NPLOC4-219ENST00000576713 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
NPLOC4-219ENST00000576713 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
NPLOC4-219ENST00000576713 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
NPLOC4-219ENST00000576713 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
NPLOC4-219ENST00000576713 TNXBP22105 4242 aa5.88□□□□□ -1.47
NPLOC4-219ENST00000576713 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
NPLOC4-219ENST00000576713 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
NPLOC4-219ENST00000576713 LINC00474Q9P2X8 69 aa5.87□□□□□ -1.47
NPLOC4-219ENST00000576713 HSPB8Q9UJY1 196 aa5.87□□□□□ -1.47
NPLOC4-219ENST00000576713 FAM19A5Q7Z5A7 132 aaPredicted RBP5.86□□□□□ -1.47
NPLOC4-219ENST00000576713 Q8NDZ9 215 aa5.86□□□□□ -1.47
NPLOC4-219ENST00000576713 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
NPLOC4-219ENST00000576713 CXCL5P42830 114 aa5.85□□□□□ -1.47
NPLOC4-219ENST00000576713 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
NPLOC4-219ENST00000576713 DPM2O94777 84 aa5.84□□□□□ -1.47
NPLOC4-219ENST00000576713 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
NPLOC4-219ENST00000576713 PFN2P35080 140 aa5.84□□□□□ -1.47
NPLOC4-219ENST00000576713 PRR3P79522 188 aaKnown RBP5.84□□□□□ -1.47
NPLOC4-219ENST00000576713 MAP1LC3CQ9BXW4 147 aa5.84□□□□□ -1.47
NPLOC4-219ENST00000576713 PKIGQ9Y2B9 76 aa5.84□□□□□ -1.47
NPLOC4-219ENST00000576713 IGKCP01834 107 aa5.83□□□□□ -1.48
NPLOC4-219ENST00000576713 SMIM6P0DI80 62 aa5.83□□□□□ -1.48
NPLOC4-219ENST00000576713 PLNP26678 52 aa5.83□□□□□ -1.48
NPLOC4-219ENST00000576713 LINC01545Q5VT33 79 aa5.83□□□□□ -1.48
NPLOC4-219ENST00000576713 HIST3H2BBQ8N257 126 aa5.83□□□□□ -1.48
NPLOC4-219ENST00000576713 A0A0U1RRA0 63 aa5.82□□□□□ -1.48
NPLOC4-219ENST00000576713 M0QXV9 152 aa5.82□□□□□ -1.48
NPLOC4-219ENST00000576713 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
NPLOC4-219ENST00000576713 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
NPLOC4-219ENST00000576713 PSORS1C2Q9UIG4 136 aa5.82□□□□□ -1.48
NPLOC4-219ENST00000576713 ERG28Q9UKR5 140 aa5.82□□□□□ -1.48
NPLOC4-219ENST00000576713 KRTDAPP60985 99 aa5.81□□□□□ -1.48
NPLOC4-219ENST00000576713 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
NPLOC4-219ENST00000576713 C12orf57Q99622 126 aa5.81□□□□□ -1.48
NPLOC4-219ENST00000576713 SND1-IT1Q9HBX3 110 aa5.81□□□□□ -1.48
NPLOC4-219ENST00000576713 C22orf24Q9Y442 160 aa5.81□□□□□ -1.48
NPLOC4-219ENST00000576713 IGKV2D-26A0A0A0MRZ7 120 aa5.8□□□□□ -1.48
NPLOC4-219ENST00000576713 LEPROTO15243 131 aa5.8□□□□□ -1.48
NPLOC4-219ENST00000576713 SMIM13P0DJ93 91 aa5.8□□□□□ -1.48
NPLOC4-219ENST00000576713 PET117Q6UWS5 81 aa5.8□□□□□ -1.48
NPLOC4-219ENST00000576713 HIST1H2BLQ99880 126 aa5.8□□□□□ -1.48
NPLOC4-219ENST00000576713 NDUFA12Q9UI09 145 aa5.8□□□□□ -1.48
NPLOC4-219ENST00000576713 C5orf52A6NGY3 159 aa5.79□□□□□ -1.48
NPLOC4-219ENST00000576713 KRTAP29-1A8MX34 341 aaPredicted RBP5.79□□□□□ -1.48
NPLOC4-219ENST00000576713 J3QQQ9 107 aa5.79□□□□□ -1.48
NPLOC4-219ENST00000576713 SRSF9Q13242 221 aaKnown RBP eCLIP5.79□□□□□ -1.48
NPLOC4-219ENST00000576713 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
NPLOC4-219ENST00000576713 E9PLD3 99 aa5.78□□□□□ -1.48
NPLOC4-219ENST00000576713 VPREB1P12018 145 aa5.78□□□□□ -1.48
NPLOC4-219ENST00000576713 SNRPEP62304 92 aaKnown RBP5.78□□□□□ -1.48
NPLOC4-219ENST00000576713 ATOH7Q8N100 152 aa5.78□□□□□ -1.48
NPLOC4-219ENST00000576713 DAND5Q8N907 189 aa5.78□□□□□ -1.48
NPLOC4-219ENST00000576713 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
NPLOC4-219ENST00000576713 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 AKR1D1P51857 326 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 LINC00158P58513 81 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 COX17Q14061 63 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 PLEKHB2Q96CS7 222 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 LINC00167Q96N53 147 aa5.77□□□□□ -1.49
NPLOC4-219ENST00000576713 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
NPLOC4-219ENST00000576713 MRPL55Q7Z7F7 128 aaKnown RBP5.76□□□□□ -1.49
NPLOC4-219ENST00000576713 MIR7-3HGQ8N6C7 128 aa5.76□□□□□ -1.49
NPLOC4-219ENST00000576713 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 MYMXA0A1B0GTQ4 84 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 PCP4L1A6NKN8 68 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 SCGB1D1O95968 90 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 HERVK_113P61574 105 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 HERV-K104P63124 156 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 UBE2BP63146 152 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 MEIG1Q5JSS6 88 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 TP73-AS1Q9UF72 201 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 PAM16Q9Y3D7 125 aa5.75□□□□□ -1.49
NPLOC4-219ENST00000576713 IGLV7-43P04211 117 aa5.74□□□□□ -1.49
NPLOC4-219ENST00000576713 S100A6P06703 90 aa5.74□□□□□ -1.49
NPLOC4-219ENST00000576713 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
NPLOC4-219ENST00000576713 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
NPLOC4-219ENST00000576713 LITAFQ99732 161 aa5.74□□□□□ -1.49
NPLOC4-219ENST00000576713 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms