RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 Q6ZQY7 126 aa9.85□□□□□ -0.83
SMG6-215ENST00000574501 FN1P02751 2386 aaKnown RBP9.85□□□□□ -0.83
SMG6-215ENST00000574501 ZNF469Q96JG9 3925 aaPredicted RBP9.84□□□□□ -0.83
SMG6-215ENST00000574501 CR1P17927 2039 aa9.84□□□□□ -0.83
SMG6-215ENST00000574501 J3QKU1 62 aa9.84□□□□□ -0.83
SMG6-215ENST00000574501 GYPEP15421 78 aa9.84□□□□□ -0.83
SMG6-215ENST00000574501 CXCL6P80162 114 aa9.83□□□□□ -0.84
SMG6-215ENST00000574501 COX17Q14061 63 aa9.83□□□□□ -0.84
SMG6-215ENST00000574501 PTPN13Q12923 2485 aa9.82□□□□□ -0.84
SMG6-215ENST00000574501 TRBV7-4A0A0J9YYF1 115 aa9.82□□□□□ -0.84
SMG6-215ENST00000574501 MIFP14174 115 aa9.82□□□□□ -0.84
SMG6-215ENST00000574501 BRK1Q8WUW1 75 aa9.82□□□□□ -0.84
SMG6-215ENST00000574501 MUC7Q8TAX7 377 aa9.81□□□□□ -0.84
SMG6-215ENST00000574501 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 A0A1B0GUV1 79 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 CSNK1G2-AS1Q8NCQ2 148 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 CCL24O00175 119 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 FSHBP01225 129 aa9.8□□□□□ -0.84
SMG6-215ENST00000574501 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
SMG6-215ENST00000574501 DSCR9P59020 149 aa9.79□□□□□ -0.84
SMG6-215ENST00000574501 NREPQ16612 68 aa9.79□□□□□ -0.84
SMG6-215ENST00000574501 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
SMG6-215ENST00000574501 NAV2Q8IVL1 2488 aa9.79□□□□□ -0.84
SMG6-215ENST00000574501 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
SMG6-215ENST00000574501 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
SMG6-215ENST00000574501 LINC01006Q8NI28 216 aa9.78□□□□□ -0.84
SMG6-215ENST00000574501 NDUFC1O43677 76 aa9.78□□□□□ -0.84
SMG6-215ENST00000574501 UNQ6190/PRO20217Q6UXQ8 127 aa9.78□□□□□ -0.84
SMG6-215ENST00000574501 Q8N9L7 120 aa9.78□□□□□ -0.84
SMG6-215ENST00000574501 SONP18583 2426 aaKnown RBP9.78□□□□□ -0.84
SMG6-215ENST00000574501 IGHV4-28A0A0C4DH34 117 aa9.77□□□□□ -0.84
SMG6-215ENST00000574501 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.84
SMG6-215ENST00000574501 BPY2O14599 106 aa9.77□□□□□ -0.85
SMG6-215ENST00000574501 ANGP03950 147 aaKnown RBP9.76□□□□□ -0.85
SMG6-215ENST00000574501 PDE6GP18545 87 aa9.76□□□□□ -0.85
SMG6-215ENST00000574501 HECTD1Q9ULT8 2610 aa9.76□□□□□ -0.85
SMG6-215ENST00000574501 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
SMG6-215ENST00000574501 IGHV4-31P0DP07 118 aa9.75□□□□□ -0.85
SMG6-215ENST00000574501 C19orf73Q9NVV2 129 aa9.74□□□□□ -0.85
SMG6-215ENST00000574501 REG3AQ06141 175 aa9.73□□□□□ -0.85
SMG6-215ENST00000574501 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
SMG6-215ENST00000574501 ESM1Q9NQ30 184 aa9.72□□□□□ -0.85
SMG6-215ENST00000574501 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
SMG6-215ENST00000574501 SPAG11BQ08648 103 aa9.71□□□□□ -0.85
SMG6-215ENST00000574501 CYSRT1A8MQ03 144 aa9.71□□□□□ -0.86
SMG6-215ENST00000574501 DIRC1Q969H9 104 aa9.71□□□□□ -0.86
SMG6-215ENST00000574501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
SMG6-215ENST00000574501 ITPR2Q14571 2701 aa9.69□□□□□ -0.86
SMG6-215ENST00000574501 NOTCH2Q04721 2471 aa9.69□□□□□ -0.86
SMG6-215ENST00000574501 DAD1P61803 113 aa9.69□□□□□ -0.86
SMG6-215ENST00000574501 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
SMG6-215ENST00000574501 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
SMG6-215ENST00000574501 PRYO14603 147 aa9.68□□□□□ -0.86
SMG6-215ENST00000574501 C1orf195Q5TG92 126 aa9.68□□□□□ -0.86
SMG6-215ENST00000574501 FLNBO75369 2602 aaKnown RBP9.68□□□□□ -0.86
SMG6-215ENST00000574501 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
SMG6-215ENST00000574501 CMC4P56277 68 aaPredicted RBP9.67□□□□□ -0.86
SMG6-215ENST00000574501 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
SMG6-215ENST00000574501 COX7BP24311 80 aa9.67□□□□□ -0.86
SMG6-215ENST00000574501 HIGD2AQ9BW72 106 aa9.67□□□□□ -0.86
SMG6-215ENST00000574501 CCDC168Q8NDH2 2452 aa9.67□□□□□ -0.86
SMG6-215ENST00000574501 H3BQ85 93 aa9.66□□□□□ -0.86
SMG6-215ENST00000574501 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMG6-215ENST00000574501 F8WDY8 70 aa9.65□□□□□ -0.86
SMG6-215ENST00000574501 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
SMG6-215ENST00000574501 OCR1Q9BZK8 76 aa9.65□□□□□ -0.86
SMG6-215ENST00000574501 ERC2-IT1O76042 136 aa9.65□□□□□ -0.86
SMG6-215ENST00000574501 A0A0J9YWU9 116 aa9.64□□□□□ -0.87
SMG6-215ENST00000574501 DEFB4AO15263 64 aa9.64□□□□□ -0.87
SMG6-215ENST00000574501 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
SMG6-215ENST00000574501 ESRGQ1W209 222 aa9.64□□□□□ -0.87
SMG6-215ENST00000574501 Q6ZTC4 211 aa9.64□□□□□ -0.87
SMG6-215ENST00000574501 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
SMG6-215ENST00000574501 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
SMG6-215ENST00000574501 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
SMG6-215ENST00000574501 KRTAP10-9P60411 292 aa9.63□□□□□ -0.87
SMG6-215ENST00000574501 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
SMG6-215ENST00000574501 LRCOL1A6NCL2 159 aa9.62□□□□□ -0.87
SMG6-215ENST00000574501 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
SMG6-215ENST00000574501 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
SMG6-215ENST00000574501 V9GYY9 64 aa9.62□□□□□ -0.87
SMG6-215ENST00000574501 CELA1Q9UNI1 258 aa9.6□□□□□ -0.87
SMG6-215ENST00000574501 X6R8D5 127 aa9.6□□□□□ -0.87
SMG6-215ENST00000574501 FAM30AQ9NZY2 134 aa9.6□□□□□ -0.87
SMG6-215ENST00000574501 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
SMG6-215ENST00000574501 SEC61GP60059 68 aa9.57□□□□□ -0.88
SMG6-215ENST00000574501 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
SMG6-215ENST00000574501 SMIM29Q86T20 159 aa9.56□□□□□ -0.88
SMG6-215ENST00000574501 DEFB105AQ8NG35 78 aa9.56□□□□□ -0.88
SMG6-215ENST00000574501 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
SMG6-215ENST00000574501 VPREB1P12018 145 aa9.55□□□□□ -0.88
SMG6-215ENST00000574501 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
SMG6-215ENST00000574501 PDZD2O15018 2839 aa9.54□□□□□ -0.88
SMG6-215ENST00000574501 GVQW2A0A096LPI5 108 aaPredicted RBP9.54□□□□□ -0.88
SMG6-215ENST00000574501 HTN3P15516 51 aa9.53□□□□□ -0.88
SMG6-215ENST00000574501 MTORP42345 2549 aa9.53□□□□□ -0.88
SMG6-215ENST00000574501 VWFP04275 2813 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms