RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 Q1RN00 199 aa6.25□□□□□ -1.41
NPLOC4-216ENST00000574344 MEIG1Q5JSS6 88 aa6.25□□□□□ -1.41
NPLOC4-216ENST00000574344 PRSS2P07478 247 aa6.24□□□□□ -1.41
NPLOC4-216ENST00000574344 KRTAP26-1Q6PEX3 210 aa6.24□□□□□ -1.41
NPLOC4-216ENST00000574344 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
NPLOC4-216ENST00000574344 NAA38Q9BRA0 125 aaKnown RBP6.24□□□□□ -1.41
NPLOC4-216ENST00000574344 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
NPLOC4-216ENST00000574344 COX6A2Q02221 97 aa6.23□□□□□ -1.41
NPLOC4-216ENST00000574344 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
NPLOC4-216ENST00000574344 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
NPLOC4-216ENST00000574344 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 LINC00959A0A1B0GUT2 108 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 A4D1N5 150 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 GAGE12HA6NDE8 117 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 PSMB2P49721 201 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 MUSTN1Q8IVN3 82 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 TOMM7Q9P0U1 55 aa6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
NPLOC4-216ENST00000574344 A0A087WZ39 114 aa6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 TSPAN13O95857 204 aa6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 CFAP161Q6P656 301 aa6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 CHCHD10Q8WYQ3 142 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
NPLOC4-216ENST00000574344 TRBV20-1A0A075B6N2 111 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 COX7A2LO14548 114 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 CFC1BP0CG36 223 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 CFC1P0CG37 223 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 MALP21145 153 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 CXCL5P42830 114 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 XCL1P47992 114 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 LITAFQ99732 161 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 PPDPFQ9H3Y8 114 aa6.2□□□□□ -1.42
NPLOC4-216ENST00000574344 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 PANO1I0J062 215 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 COX6CP09669 75 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 SDIM1Q6ZPB5 146 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 Q8IZM0 81 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 C15orf56Q8N910 161 aa6.19□□□□□ -1.42
NPLOC4-216ENST00000574344 F8W1H4 67 aa6.18□□□□□ -1.42
NPLOC4-216ENST00000574344 K7ERU9 68 aa6.18□□□□□ -1.42
NPLOC4-216ENST00000574344 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
NPLOC4-216ENST00000574344 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
NPLOC4-216ENST00000574344 CKS1BP61024 79 aa6.18□□□□□ -1.42
NPLOC4-216ENST00000574344 NPC2P61916 151 aa6.18□□□□□ -1.42
NPLOC4-216ENST00000574344 H7C2G1 150 aa6.17□□□□□ -1.42
NPLOC4-216ENST00000574344 SLPIP03973 132 aa6.17□□□□□ -1.42
NPLOC4-216ENST00000574344 C6orf226Q5I0X4 101 aa6.17□□□□□ -1.42
NPLOC4-216ENST00000574344 C5orf38Q86SI9 138 aa6.17□□□□□ -1.42
NPLOC4-216ENST00000574344 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
NPLOC4-216ENST00000574344 A0A087WYN8 130 aa6.16□□□□□ -1.42
NPLOC4-216ENST00000574344 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
NPLOC4-216ENST00000574344 RPL13AP40429 203 aaKnown RBP6.16□□□□□ -1.42
NPLOC4-216ENST00000574344 LINC00158P58513 81 aa6.16□□□□□ -1.42
NPLOC4-216ENST00000574344 ADAMTSL4-AS1Q5T5F5 129 aa6.16□□□□□ -1.42
NPLOC4-216ENST00000574344 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
NPLOC4-216ENST00000574344 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 J3QR89 54 aa6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 OXTP01178 125 aa6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 FOXI1Q12951 378 aa6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 ATXN8Q156A1 80 aa6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 DAND5Q8N907 189 aa6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 C7orf33Q8WU49 177 aa6.15□□□□□ -1.42
NPLOC4-216ENST00000574344 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
NPLOC4-216ENST00000574344 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
NPLOC4-216ENST00000574344 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
NPLOC4-216ENST00000574344 A0A0U1RRA0 63 aa6.14□□□□□ -1.43
NPLOC4-216ENST00000574344 H3BMG7 143 aa6.14□□□□□ -1.43
NPLOC4-216ENST00000574344 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
NPLOC4-216ENST00000574344 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
NPLOC4-216ENST00000574344 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 ZNF561-AS1K7EIQ3 104 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 COX17Q14061 63 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 OCIAD2Q56VL3 154 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 LINC00526Q96FQ7 95 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
NPLOC4-216ENST00000574344 SPAG11BQ08648 103 aa6.12□□□□□ -1.43
NPLOC4-216ENST00000574344 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
NPLOC4-216ENST00000574344 A0A096LNI7 61 aa6.11□□□□□ -1.43
NPLOC4-216ENST00000574344 TRIAP1O43715 76 aa6.11□□□□□ -1.43
NPLOC4-216ENST00000574344 TCL1BO95988 128 aa6.11□□□□□ -1.43
NPLOC4-216ENST00000574344 PFN2P35080 140 aa6.11□□□□□ -1.43
NPLOC4-216ENST00000574344 SERTAD4-AS1Q5TG53 156 aa6.11□□□□□ -1.43
NPLOC4-216ENST00000574344 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
NPLOC4-216ENST00000574344 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
NPLOC4-216ENST00000574344 LINC00474Q9P2X8 69 aa6.1□□□□□ -1.43
NPLOC4-216ENST00000574344 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
NPLOC4-216ENST00000574344 Q6ZRU5 148 aa6.09□□□□□ -1.43
NPLOC4-216ENST00000574344 CAMK2N2Q96S95 79 aa6.09□□□□□ -1.43
NPLOC4-216ENST00000574344 C9JAW5 83 aa6.08□□□□□ -1.44
NPLOC4-216ENST00000574344 M0QXV9 152 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms