RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 KRTAP13-1Q8IUC0 172 aa5.39□□□□□ -1.55
NPLOC4-210ENST00000572824 COX7B2Q8TF08 81 aa5.39□□□□□ -1.55
NPLOC4-210ENST00000572824 TIMM17AQ99595 171 aa5.39□□□□□ -1.55
NPLOC4-210ENST00000572824 GEMIN7Q9H840 131 aaKnown RBP5.39□□□□□ -1.55
NPLOC4-210ENST00000572824 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 A0A096LNJ9 63 aa5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 BCE1O60756 84 aa5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 PRLHP81277 87 aa5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 RPL24P83731 157 aaKnown RBP5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 COMMD7Q86VX2 200 aa5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 NXT2Q9NPJ8 142 aaKnown RBP5.38□□□□□ -1.55
NPLOC4-210ENST00000572824 IGKV2-28A0A075B6P5 120 aa5.37□□□□□ -1.55
NPLOC4-210ENST00000572824 TMEM238C9JI98 176 aa5.37□□□□□ -1.55
NPLOC4-210ENST00000572824 IGKV2D-28P01615 120 aa5.37□□□□□ -1.55
NPLOC4-210ENST00000572824 C12orf57Q99622 126 aa5.37□□□□□ -1.55
NPLOC4-210ENST00000572824 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 NUPR1O60356 82 aa5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 SNRPEP62304 92 aaKnown RBP5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 ERASQ7Z444 233 aa5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 CST9LQ9H4G1 147 aa5.36□□□□□ -1.55
NPLOC4-210ENST00000572824 LINC01546A6NGU7 62 aa5.35□□□□□ -1.55
NPLOC4-210ENST00000572824 SMIM6P0DI80 62 aa5.35□□□□□ -1.55
NPLOC4-210ENST00000572824 PFN2P35080 140 aa5.35□□□□□ -1.55
NPLOC4-210ENST00000572824 PDZD11Q5EBL8 140 aa5.35□□□□□ -1.55
NPLOC4-210ENST00000572824 TP73-AS1Q9UF72 201 aa5.35□□□□□ -1.55
NPLOC4-210ENST00000572824 CARHSP1Q9Y2V2 147 aaKnown RBP5.35□□□□□ -1.55
NPLOC4-210ENST00000572824 PCP4L1A6NKN8 68 aa5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 VPREB1P12018 145 aa5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 ZNF22P17026 224 aaPredicted RBP5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 RPL28P46779 137 aaKnown RBP5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 TYMSOSQ8TAI1 123 aa5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 ZNF625Q96I27 306 aaPredicted RBP5.34□□□□□ -1.55
NPLOC4-210ENST00000572824 TMEM218A2RU14 115 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 LINC00587B1AMM8 73 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 K7EMI3 77 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 CXCL5P42830 114 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 RAB14P61106 215 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 SMIM29Q86T20 159 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
NPLOC4-210ENST00000572824 IGLC3P0DOY3 106 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 CRYGAP11844 174 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 S100PP25815 95 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 UBE2AP49459 152 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 SEC11AP67812 179 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 PMVKQ15126 192 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 SND1-IT1Q9HBX3 110 aa5.32□□□□□ -1.56
NPLOC4-210ENST00000572824 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
NPLOC4-210ENST00000572824 M0R378 163 aa5.31□□□□□ -1.56
NPLOC4-210ENST00000572824 NDUFA6P56556 154 aa5.31□□□□□ -1.56
NPLOC4-210ENST00000572824 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
NPLOC4-210ENST00000572824 NKAPP1Q8N9T2 125 aa5.31□□□□□ -1.56
NPLOC4-210ENST00000572824 GNB1LQ9BYB4 327 aa5.31□□□□□ -1.56
NPLOC4-210ENST00000572824 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 FA2HQ7L5A8 372 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 LINC00304Q8N9R0 145 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 C18orf32Q8TCD1 76 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 TMEM126AQ9H061 195 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 ERG28Q9UKR5 140 aa5.3□□□□□ -1.56
NPLOC4-210ENST00000572824 ATP5LO75964 103 aa5.29□□□□□ -1.56
NPLOC4-210ENST00000572824 C10orf91Q5T1B1 145 aa5.29□□□□□ -1.56
NPLOC4-210ENST00000572824 TRAV9-1A0A075B6T8 112 aa5.28□□□□□ -1.56
NPLOC4-210ENST00000572824 SMCO4Q9NRQ5 59 aa5.28□□□□□ -1.56
NPLOC4-210ENST00000572824 UQCC3Q6UW78 93 aa5.27□□□□□ -1.57
NPLOC4-210ENST00000572824 SEC11CQ9BY50 192 aa5.27□□□□□ -1.57
NPLOC4-210ENST00000572824 RPS10P5Q9NQ39 176 aa5.27□□□□□ -1.57
NPLOC4-210ENST00000572824 C5orf52A6NGY3 159 aa5.26□□□□□ -1.57
NPLOC4-210ENST00000572824 H3BRM9 83 aa5.26□□□□□ -1.57
NPLOC4-210ENST00000572824 FAM229BQ4G0N7 80 aa5.26□□□□□ -1.57
NPLOC4-210ENST00000572824 DAND5Q8N907 189 aa5.26□□□□□ -1.57
NPLOC4-210ENST00000572824 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
NPLOC4-210ENST00000572824 HIGD2AQ9BW72 106 aa5.26□□□□□ -1.57
NPLOC4-210ENST00000572824 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
NPLOC4-210ENST00000572824 HBDP02042 147 aa5.25□□□□□ -1.57
NPLOC4-210ENST00000572824 G0S2P27469 103 aa5.25□□□□□ -1.57
NPLOC4-210ENST00000572824 TMEM170BQ5T4T1 132 aa5.25□□□□□ -1.57
NPLOC4-210ENST00000572824 BAGE3Q86Y29 109 aa5.25□□□□□ -1.57
NPLOC4-210ENST00000572824 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
NPLOC4-210ENST00000572824 IGKV2D-26A0A0A0MRZ7 120 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 NCR3O14931 201 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 AKR1D1P51857 326 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 CBLN2Q8IUK8 224 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 TRAPPC1Q9Y5R8 145 aa5.24□□□□□ -1.57
NPLOC4-210ENST00000572824 LINC00614P0C842 121 aa5.23□□□□□ -1.57
NPLOC4-210ENST00000572824 SMIM13P0DJ93 91 aa5.23□□□□□ -1.57
NPLOC4-210ENST00000572824 TSPEAR-AS2P59090 65 aa5.23□□□□□ -1.57
NPLOC4-210ENST00000572824 TPRXLQ17RH7 258 aa5.23□□□□□ -1.57
NPLOC4-210ENST00000572824 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
NPLOC4-210ENST00000572824 LINC01547P58512 204 aaPredicted RBP5.22□□□□□ -1.57
NPLOC4-210ENST00000572824 LINC00158P58513 81 aa5.22□□□□□ -1.57
NPLOC4-210ENST00000572824 RHEBQ15382 184 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms