RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GHRHP01286 108 aa11.85□□□□□ -0.51
SCARF1-205ENST00000571272 SMR3AQ99954 134 aa11.85□□□□□ -0.51
SCARF1-205ENST00000571272 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
SCARF1-205ENST00000571272 RBM3P98179 157 aaKnown RBP11.84□□□□□ -0.51
SCARF1-205ENST00000571272 M0R2N4 97 aa11.83□□□□□ -0.52
SCARF1-205ENST00000571272 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
SCARF1-205ENST00000571272 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
SCARF1-205ENST00000571272 KLK12Q9UKR0 248 aa11.82□□□□□ -0.52
SCARF1-205ENST00000571272 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
SCARF1-205ENST00000571272 ATP5EP2Q5VTU8 51 aa11.81□□□□□ -0.52
SCARF1-205ENST00000571272 FASNP49327 2511 aaKnown RBP11.81□□□□□ -0.52
SCARF1-205ENST00000571272 Q6ZQT0 140 aa11.81□□□□□ -0.52
SCARF1-205ENST00000571272 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
SCARF1-205ENST00000571272 DSCR8Q96T75 97 aa11.81□□□□□ -0.52
SCARF1-205ENST00000571272 Q6ZQY7 126 aa11.8□□□□□ -0.52
SCARF1-205ENST00000571272 TMEM258P61165 79 aa11.8□□□□□ -0.52
SCARF1-205ENST00000571272 XAGE1AQ9HD64 81 aa11.8□□□□□ -0.52
SCARF1-205ENST00000571272 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
SCARF1-205ENST00000571272 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
SCARF1-205ENST00000571272 IGLV6-57P01721 117 aa11.77□□□□□ -0.52
SCARF1-205ENST00000571272 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.52
SCARF1-205ENST00000571272 TENM1Q9UKZ4 2725 aa11.77□□□□□ -0.53
SCARF1-205ENST00000571272 TRBV10-3A0A0K0K1G6 114 aa11.77□□□□□ -0.53
SCARF1-205ENST00000571272 HAMPP81172 84 aa11.77□□□□□ -0.53
SCARF1-205ENST00000571272 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
SCARF1-205ENST00000571272 IGHV4-30-4P0DP06 118 aa11.76□□□□□ -0.53
SCARF1-205ENST00000571272 RPS28P62857 69 aaKnown RBP11.76□□□□□ -0.53
SCARF1-205ENST00000571272 HELZ2Q9BYK8 2649 aaKnown RBP11.75□□□□□ -0.53
SCARF1-205ENST00000571272 LELP1Q5T871 98 aa11.75□□□□□ -0.53
SCARF1-205ENST00000571272 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
SCARF1-205ENST00000571272 LOC110117498A0A087WWA1 95 aa11.73□□□□□ -0.53
SCARF1-205ENST00000571272 Q8NAQ8 132 aa11.73□□□□□ -0.53
SCARF1-205ENST00000571272 C6orf48Q9UBA6 75 aa11.73□□□□□ -0.53
SCARF1-205ENST00000571272 APOC4P55056 127 aa11.73□□□□□ -0.53
SCARF1-205ENST00000571272 LINC01547P58512 204 aaPredicted RBP11.73□□□□□ -0.53
SCARF1-205ENST00000571272 C9orf66Q5T8R8 295 aa11.73□□□□□ -0.53
SCARF1-205ENST00000571272 OXTP01178 125 aa11.73□□□□□ -0.53
SCARF1-205ENST00000571272 Q6ZVQ6 151 aa11.72□□□□□ -0.53
SCARF1-205ENST00000571272 ATRQ13535 2644 aa11.72□□□□□ -0.53
SCARF1-205ENST00000571272 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
SCARF1-205ENST00000571272 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
SCARF1-205ENST00000571272 HIVEP1P15822 2718 aa11.71□□□□□ -0.54
SCARF1-205ENST00000571272 SPART-AS1P0CW21 52 aa11.7□□□□□ -0.54
SCARF1-205ENST00000571272 DIRC1Q969H9 104 aa11.7□□□□□ -0.54
SCARF1-205ENST00000571272 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
SCARF1-205ENST00000571272 MUC7Q8TAX7 377 aa11.69□□□□□ -0.54
SCARF1-205ENST00000571272 ZNF73O43830 326 aaPredicted RBP11.68□□□□□ -0.54
SCARF1-205ENST00000571272 MIFP14174 115 aa11.68□□□□□ -0.54
SCARF1-205ENST00000571272 TRAV10A0A0B4J240 114 aa11.67□□□□□ -0.54
SCARF1-205ENST00000571272 SCXQ7RTU7 201 aa11.67□□□□□ -0.54
SCARF1-205ENST00000571272 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
SCARF1-205ENST00000571272 COX7BP24311 80 aa11.66□□□□□ -0.54
SCARF1-205ENST00000571272 CAMK2N2Q96S95 79 aa11.64□□□□□ -0.55
SCARF1-205ENST00000571272 HECTD1Q9ULT8 2610 aa11.64□□□□□ -0.55
SCARF1-205ENST00000571272 PDE6GP18545 87 aa11.63□□□□□ -0.55
SCARF1-205ENST00000571272 WFDC10BQ8IUB3 73 aa11.63□□□□□ -0.55
SCARF1-205ENST00000571272 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
SCARF1-205ENST00000571272 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.62□□□□□ -0.55
SCARF1-205ENST00000571272 OTOGQ6ZRI0 2925 aa11.62□□□□□ -0.55
SCARF1-205ENST00000571272 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
SCARF1-205ENST00000571272 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
SCARF1-205ENST00000571272 PKD1L1Q8TDX9 2849 aa11.61□□□□□ -0.55
SCARF1-205ENST00000571272 TRBV7-4A0A0J9YYF1 115 aa11.61□□□□□ -0.55
SCARF1-205ENST00000571272 VPREB1P12018 145 aa11.61□□□□□ -0.55
SCARF1-205ENST00000571272 SNURFQ9Y675 71 aa11.61□□□□□ -0.55
SCARF1-205ENST00000571272 Q6ZRU5 148 aa11.6□□□□□ -0.55
SCARF1-205ENST00000571272 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
SCARF1-205ENST00000571272 CXCL6P80162 114 aa11.59□□□□□ -0.55
SCARF1-205ENST00000571272 C5orf47Q569G3 176 aa11.59□□□□□ -0.55
SCARF1-205ENST00000571272 H3BQ85 93 aa11.58□□□□□ -0.56
SCARF1-205ENST00000571272 C4orf26Q17RF5 130 aa11.58□□□□□ -0.56
SCARF1-205ENST00000571272 NSD1Q96L73 2696 aaPredicted RBP11.58□□□□□ -0.56
SCARF1-205ENST00000571272 FAM236DA0A1B0GTK5 79 aa11.57□□□□□ -0.56
SCARF1-205ENST00000571272 H7BZZ5 65 aa11.57□□□□□ -0.56
SCARF1-205ENST00000571272 FAM236CP0DP71 79 aa11.57□□□□□ -0.56
SCARF1-205ENST00000571272 INAFM1C9JVW0 142 aa11.57□□□□□ -0.56
SCARF1-205ENST00000571272 RMI2Q96E14 147 aa11.57□□□□□ -0.56
SCARF1-205ENST00000571272 M0R378 163 aa11.55□□□□□ -0.56
SCARF1-205ENST00000571272 KPRPQ5T749 579 aaPredicted RBP11.55□□□□□ -0.56
SCARF1-205ENST00000571272 BCE1O60756 84 aa11.54□□□□□ -0.56
SCARF1-205ENST00000571272 EGFEM1PQ0D2K5 195 aa11.54□□□□□ -0.56
SCARF1-205ENST00000571272 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
SCARF1-205ENST00000571272 RETNQ9HD89 108 aa11.54□□□□□ -0.56
SCARF1-205ENST00000571272 Q5XG85 94 aa11.53□□□□□ -0.56
SCARF1-205ENST00000571272 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
SCARF1-205ENST00000571272 C15orf56Q8N910 161 aa11.53□□□□□ -0.56
SCARF1-205ENST00000571272 Q8N9L7 120 aa11.53□□□□□ -0.56
SCARF1-205ENST00000571272 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
SCARF1-205ENST00000571272 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.57
SCARF1-205ENST00000571272 HRCT1Q6UXD1 115 aa11.52□□□□□ -0.57
SCARF1-205ENST00000571272 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
SCARF1-205ENST00000571272 Q6ZRP5 223 aa11.51□□□□□ -0.57
SCARF1-205ENST00000571272 F8WEM9 126 aa11.5□□□□□ -0.57
SCARF1-205ENST00000571272 Q6ZTC4 211 aa11.5□□□□□ -0.57
SCARF1-205ENST00000571272 J3QKU1 62 aa11.49□□□□□ -0.57
SCARF1-205ENST00000571272 DEFB105AQ8NG35 78 aa11.49□□□□□ -0.57
SCARF1-205ENST00000571272 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
SCARF1-205ENST00000571272 ESRGQ1W209 222 aa11.47□□□□□ -0.57
SCARF1-205ENST00000571272 C3orf84H3BNL1 204 aa11.47□□□□□ -0.57
SCARF1-205ENST00000571272 C1orf43Q9BWL3 253 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms