RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 IGKV2D-28P01615 120 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 NBDYA0A0U1RRE5 68 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 RPL13AP40429 203 aaKnown RBP7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 Q8NDZ9 215 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 C2orf48Q96LS8 159 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 SLPIP03973 132 aa7.17□□□□□ -1.26
PDXDC1-216ENST00000569715 TTC32Q5I0X7 151 aa7.17□□□□□ -1.26
PDXDC1-216ENST00000569715 LINC00337Q8N6G1 96 aa7.17□□□□□ -1.26
PDXDC1-216ENST00000569715 TRBV30A0A0K0K1B3 111 aa7.16□□□□□ -1.26
PDXDC1-216ENST00000569715 M0R2N4 97 aa7.16□□□□□ -1.26
PDXDC1-216ENST00000569715 PRR3P79522 188 aaKnown RBP7.16□□□□□ -1.26
PDXDC1-216ENST00000569715 SNCGO76070 127 aa7.15□□□□□ -1.26
PDXDC1-216ENST00000569715 SYCNQ0VAF6 134 aa7.15□□□□□ -1.26
PDXDC1-216ENST00000569715 WWC2-AS2Q96NR7 200 aa7.15□□□□□ -1.26
PDXDC1-216ENST00000569715 XAGE1AQ9HD64 81 aa7.15□□□□□ -1.26
PDXDC1-216ENST00000569715 PSCAO43653 123 aa7.14□□□□□ -1.27
PDXDC1-216ENST00000569715 TRIAP1O43715 76 aa7.14□□□□□ -1.27
PDXDC1-216ENST00000569715 CARD19Q96LW7 228 aa7.14□□□□□ -1.27
PDXDC1-216ENST00000569715 DNAH2Q9P225 4427 aa7.13□□□□□ -1.27
PDXDC1-216ENST00000569715 C9JAW5 83 aa7.13□□□□□ -1.27
PDXDC1-216ENST00000569715 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
PDXDC1-216ENST00000569715 Q6ZRP5 223 aa7.13□□□□□ -1.27
PDXDC1-216ENST00000569715 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
PDXDC1-216ENST00000569715 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
PDXDC1-216ENST00000569715 NDUFC2-KCTD14E9PQ53 114 aa7.12□□□□□ -1.27
PDXDC1-216ENST00000569715 NCR3O14931 201 aa7.12□□□□□ -1.27
PDXDC1-216ENST00000569715 GAGE2BQ13066 116 aa7.12□□□□□ -1.27
PDXDC1-216ENST00000569715 F8WDY8 70 aa7.11□□□□□ -1.27
PDXDC1-216ENST00000569715 TCL1BO95988 128 aa7.11□□□□□ -1.27
PDXDC1-216ENST00000569715 TRAV13-2A0A0B4J235 113 aa7.11□□□□□ -1.27
PDXDC1-216ENST00000569715 ALMS1Q8TCU4 4167 aa7.11□□□□□ -1.27
PDXDC1-216ENST00000569715 SS18L2Q9UHA2 77 aa7.11□□□□□ -1.27
PDXDC1-216ENST00000569715 TRBV20-1A0A075B6N2 111 aa7.1□□□□□ -1.27
PDXDC1-216ENST00000569715 B5MCH6 92 aa7.1□□□□□ -1.27
PDXDC1-216ENST00000569715 NDUFC2O95298 119 aa7.1□□□□□ -1.27
PDXDC1-216ENST00000569715 OR13C6PQ8NH95 151 aa7.1□□□□□ -1.27
PDXDC1-216ENST00000569715 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
PDXDC1-216ENST00000569715 LY6G6CO95867 125 aa7.1□□□□□ -1.27
PDXDC1-216ENST00000569715 RPL18AQ02543 176 aaKnown RBP7.09□□□□□ -1.27
PDXDC1-216ENST00000569715 Q6ZR54 194 aa7.09□□□□□ -1.27
PDXDC1-216ENST00000569715 PPDPFLQ8WWR9 84 aa7.09□□□□□ -1.27
PDXDC1-216ENST00000569715 LRCOL1A6NCL2 159 aa7.09□□□□□ -1.27
PDXDC1-216ENST00000569715 COX6CP09669 75 aa7.09□□□□□ -1.27
PDXDC1-216ENST00000569715 C9orf129Q5T035 196 aaKnown RBP7.09□□□□□ -1.27
PDXDC1-216ENST00000569715 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.09□□□□□ -1.28
PDXDC1-216ENST00000569715 MT-ATP8P03928 68 aa7.09□□□□□ -1.28
PDXDC1-216ENST00000569715 CLEC2BQ92478 149 aa7.09□□□□□ -1.28
PDXDC1-216ENST00000569715 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
PDXDC1-216ENST00000569715 SMIM11BQ8TCY0 68 aa7.08□□□□□ -1.28
PDXDC1-216ENST00000569715 HYDINQ4G0P3 5121 aa7.08□□□□□ -1.28
PDXDC1-216ENST00000569715 LINC00476Q8WZB0 136 aa7.08□□□□□ -1.28
PDXDC1-216ENST00000569715 TLX1NBP0CAT3 122 aa7.07□□□□□ -1.28
PDXDC1-216ENST00000569715 VPREB1P12018 145 aa7.07□□□□□ -1.28
PDXDC1-216ENST00000569715 RPL28P46779 137 aaKnown RBP7.06□□□□□ -1.28
PDXDC1-216ENST00000569715 SLC25A20O43772 301 aa7.06□□□□□ -1.28
PDXDC1-216ENST00000569715 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
PDXDC1-216ENST00000569715 PRO0461Q9UI25 63 aa7.05□□□□□ -1.28
PDXDC1-216ENST00000569715 HECTD4Q9Y4D8 3996 aa7.05□□□□□ -1.28
PDXDC1-216ENST00000569715 SERTAD4-AS1Q5TG53 156 aa7.05□□□□□ -1.28
PDXDC1-216ENST00000569715 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
PDXDC1-216ENST00000569715 TEN1Q86WV5 123 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 FAM218AQ96MZ4 157 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 C3orf84H3BNL1 204 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 LINC01620Q4KN68 170 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 S100A7L2Q5SY68 101 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 C14orf177Q52M58 125 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
PDXDC1-216ENST00000569715 TRBV10-3A0A0K0K1G6 114 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 LST1O00453 97 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
PDXDC1-216ENST00000569715 A0A096LNI7 61 aa7.02□□□□□ -1.29
PDXDC1-216ENST00000569715 A0A087WTM6 91 aa7.02□□□□□ -1.29
PDXDC1-216ENST00000569715 XGP55808 180 aa7.02□□□□□ -1.29
PDXDC1-216ENST00000569715 Q8N814 137 aa7.02□□□□□ -1.29
PDXDC1-216ENST00000569715 C1orf134Q5TEV5 83 aa7.01□□□□□ -1.29
PDXDC1-216ENST00000569715 SMIM20Q8N5G0 67 aa7.01□□□□□ -1.29
PDXDC1-216ENST00000569715 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
PDXDC1-216ENST00000569715 A0A087WYN8 130 aa7□□□□□ -1.29
PDXDC1-216ENST00000569715 C6orf99Q4VX62 202 aa7□□□□□ -1.29
PDXDC1-216ENST00000569715 M0R378 163 aa7□□□□□ -1.29
PDXDC1-216ENST00000569715 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
PDXDC1-216ENST00000569715 CHTF8P0CG12 524 aa6.99□□□□□ -1.29
PDXDC1-216ENST00000569715 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
PDXDC1-216ENST00000569715 SACSQ9NZJ4 4579 aa6.99□□□□□ -1.29
PDXDC1-216ENST00000569715 C9orf163Q8N9P6 203 aa6.98□□□□□ -1.29
PDXDC1-216ENST00000569715 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
PDXDC1-216ENST00000569715 TRAV23DV6A0A075B6W5 121 aa6.98□□□□□ -1.29
PDXDC1-216ENST00000569715 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
PDXDC1-216ENST00000569715 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
PDXDC1-216ENST00000569715 H0YGX0 51 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms