RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 GAGE2EQ4V326 116 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 PYY3Q5JQD4 70 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 FAM19A2Q8N3H0 131 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 CHCHD1Q96BP2 118 aaKnown RBP3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 TMEM101Q96IK0 257 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 C20orf78Q9BR46 151 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 MAP1LC3AQ9H492 121 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 GAGE2DQ9UEU5 116 aa3.51□□□□□ -1.85
HERPUD1-217ENST00000569429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 IGKV2-29A2NJV5 120 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 F8WDY8 70 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 HSBP1O75506 76 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 SERF1AO75920 110 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 SPINK1P00995 79 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 NRACQ8N912 160 aa3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 ALKBH7Q9BT30 221 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-217ENST00000569429 TRBV27A0A0K0K1C4 114 aa3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 COX7A2LO14548 114 aa3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 POLR2KP53803 58 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 SMAGPQ0VAQ4 97 aa3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 C18orf32Q8TCD1 76 aa3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 LAMTOR2Q9Y2Q5 125 aa3.49□□□□□ -1.85
HERPUD1-217ENST00000569429 C20orf202A1L168 122 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 G0S2P27469 103 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 IFI27P40305 119 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 PMCHL1Q16048 86 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 C9orf129Q5T035 196 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 FA2HQ7L5A8 372 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 Q8N8P6 123 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 SMIM2Q9BVW6 85 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 NXT2Q9NPJ8 142 aaKnown RBP3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 HSPB8Q9UJY1 196 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 C22orf24Q9Y442 160 aa3.48□□□□□ -1.85
HERPUD1-217ENST00000569429 NDUFA1O15239 70 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 LINC00614P0C842 121 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 KRTDAPP60985 99 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 RPS29P62273 56 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 ORMDL2Q53FV1 153 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 Q8N377 158 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 MAP1LC3CQ9BXW4 147 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 C6orf48Q9UBA6 75 aa3.47□□□□□ -1.85
HERPUD1-217ENST00000569429 TRAV13-1A0A0B4J241 112 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 LEPROTL1O95214 131 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 DDTP30046 118 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 RPL32P62910 135 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 RNASE13Q5GAN3 156 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 TEX43Q6ZNM6 134 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 SCGB3A1Q96QR1 104 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 VAMP8Q9BV40 100 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 TP73-AS1Q9UF72 201 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 CYSLTR1Q9Y271 337 aa3.46□□□□□ -1.86
HERPUD1-217ENST00000569429 HSBP1L1C9JCN9 74 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 K7EMI3 77 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 SLC25A20O43772 301 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 UBE2AP49459 152 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 C2orf66Q6UXQ4 117 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 Q6ZN92 141 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 MRPL52Q86TS9 123 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 Q8NBF4 154 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 VCX2Q9H322 139 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 CDC42SE2Q9NRR3 84 aa3.45□□□□□ -1.86
HERPUD1-217ENST00000569429 LINC01549A6NIU2 74 aa3.44□□□□□ -1.86
HERPUD1-217ENST00000569429 LINC00587B1AMM8 73 aa3.44□□□□□ -1.86
HERPUD1-217ENST00000569429 NDUFC2-KCTD14E9PQ53 114 aa3.44□□□□□ -1.86
HERPUD1-217ENST00000569429 VPREB1P12018 145 aa3.44□□□□□ -1.86
HERPUD1-217ENST00000569429 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-217ENST00000569429 SPANXA1Q9NS26 97 aa3.44□□□□□ -1.86
HERPUD1-217ENST00000569429 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 SYS1-DBNDD2H3BUS1 97 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 HBDP02042 147 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 LGALS3P17931 250 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 SPATA45Q537H7 98 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 PAPPA-AS1Q5QFB9 102 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 Q6Q795 121 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 C5orf38Q86SI9 138 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 PLEKHB2Q96CS7 222 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 TMEM141Q96I45 108 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 MIEN1Q9BRT3 115 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 C2orf88Q9BSF0 95 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 TIMM21Q9BVV7 248 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 PRO1933Q9H354 126 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 UQCR10Q9UDW1 63 aa3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 CSDC2Q9Y534 153 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-217ENST00000569429 TRBV30A0A0K0K1B3 111 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 H0Y8G0 127 aa3.42□□□□□ -1.86
HERPUD1-217ENST00000569429 M0R143 59 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms