RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	IGKV2-28	A0A075B6P5	120 aa		6.26	□□□□□ -1.41
UBR1-207	ENST00000568782		A0A0U1RRA0	63 aa		6.26	□□□□□ -1.41
UBR1-207	ENST00000568782	IGKV2D-28	P01615	120 aa		6.26	□□□□□ -1.41
UBR1-207	ENST00000568782	FABP4	P15090	132 aa		6.26	□□□□□ -1.41
UBR1-207	ENST00000568782	S100A12	P80511	92 aa		6.26	□□□□□ -1.41
UBR1-207	ENST00000568782	PLEKHB2	Q96CS7	222 aa		6.25	□□□□□ -1.41
UBR1-207	ENST00000568782	NDUFA12	Q9UI09	145 aa		6.25	□□□□□ -1.41
UBR1-207	ENST00000568782	COLCA2	A8K830	154 aa		6.24	□□□□□ -1.41
UBR1-207	ENST00000568782	DPM2	O94777	84 aa		6.24	□□□□□ -1.41
UBR1-207	ENST00000568782	VPREB1	P12018	145 aa		6.24	□□□□□ -1.41
UBR1-207	ENST00000568782	FAM19A1	Q7Z5A9	133 aa		6.24	□□□□□ -1.41
UBR1-207	ENST00000568782		M0R378	163 aa		6.23	□□□□□ -1.41
UBR1-207	ENST00000568782	SMIM13	P0DJ93	91 aa		6.23	□□□□□ -1.41
UBR1-207	ENST00000568782	CRYGA	P11844	174 aa		6.23	□□□□□ -1.41
UBR1-207	ENST00000568782	LGALS3	P17931	250 aa	Known RBP	6.23	□□□□□ -1.41
UBR1-207	ENST00000568782	MIEN1	Q9BRT3	115 aa		6.23	□□□□□ -1.41
UBR1-207	ENST00000568782	LEPROT	O15243	131 aa		6.22	□□□□□ -1.41
UBR1-207	ENST00000568782	IGKC	P01834	107 aa		6.22	□□□□□ -1.41
UBR1-207	ENST00000568782	KRTAP1-4	P0C5Y4	121 aa		6.22	□□□□□ -1.41
UBR1-207	ENST00000568782	BOD1L2	Q8IYS8	172 aa		6.22	□□□□□ -1.41
UBR1-207	ENST00000568782	MIR7-3HG	Q8N6C7	128 aa		6.22	□□□□□ -1.41
UBR1-207	ENST00000568782	TMEM126A	Q9H061	195 aa		6.22	□□□□□ -1.41
UBR1-207	ENST00000568782	SCO1	O75880	301 aa		6.21	□□□□□ -1.42
UBR1-207	ENST00000568782	NMU	P48645	174 aa		6.21	□□□□□ -1.42
UBR1-207	ENST00000568782	TYMSOS	Q8TAI1	123 aa		6.21	□□□□□ -1.42
UBR1-207	ENST00000568782	IGKV2D-26	A0A0A0MRZ7	120 aa		6.2	□□□□□ -1.42
UBR1-207	ENST00000568782		J3QQQ9	107 aa		6.2	□□□□□ -1.42
UBR1-207	ENST00000568782	TMEM238	C9JI98	176 aa		6.19	□□□□□ -1.42
UBR1-207	ENST00000568782	PRLH	P81277	87 aa		6.19	□□□□□ -1.42
UBR1-207	ENST00000568782	TMA7	Q9Y2S6	64 aa	Known RBP	6.19	□□□□□ -1.42
UBR1-207	ENST00000568782	LINC00310	P59036	64 aa		6.18	□□□□□ -1.42
UBR1-207	ENST00000568782	PMCHL2	Q9BQD1	86 aa		6.18	□□□□□ -1.42
UBR1-207	ENST00000568782	HIGD2A	Q9BW72	106 aa		6.18	□□□□□ -1.42
UBR1-207	ENST00000568782	ETDC	A0A1B0GVM5	59 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	PRY	O14603	147 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	NCR3	O14931	201 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BK	O60814	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BJ	P06899	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BO	P23527	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BB	P33778	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BD	P58876	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BC	P62807	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST2H2BE	Q16778	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	FAM229B	Q4G0N7	80 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BH	Q93079	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BN	Q99877	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	HIST1H2BM	Q99879	126 aa		6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.17	□□□□□ -1.42
UBR1-207	ENST00000568782	TNXB	P22105	4242 aa		6.16	□□□□□ -1.42
UBR1-207	ENST00000568782	SYS1-DBNDD2	H3BUS1	97 aa		6.16	□□□□□ -1.42
UBR1-207	ENST00000568782	PRR4	Q16378	134 aa		6.16	□□□□□ -1.42
UBR1-207	ENST00000568782	S100A7L2	Q5SY68	101 aa		6.16	□□□□□ -1.42
UBR1-207	ENST00000568782	KRTAP13-1	Q8IUC0	172 aa		6.16	□□□□□ -1.42
UBR1-207	ENST00000568782	TSPAN13	O95857	204 aa		6.15	□□□□□ -1.42
UBR1-207	ENST00000568782	CBY1	Q9Y3M2	126 aa		6.15	□□□□□ -1.42
UBR1-207	ENST00000568782		A0A087X002	238 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782		E9PLD3	99 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782	TSPEAR-AS2	P59090	65 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782	PET117	Q6UWS5	81 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782	LINC00337	Q8N6G1	96 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782	DAND5	Q8N907	189 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782		Q8NDZ9	215 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782	ANAPC11	Q9NYG5	84 aa		6.14	□□□□□ -1.43
UBR1-207	ENST00000568782	TRBV10-3	A0A0K0K1G6	114 aa		6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	TRBV10-2	A0A0K0K1G8	114 aa		6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	C20orf202	A1L168	122 aa		6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	DDT	P30046	118 aa		6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	HINT1	P49773	126 aa	Predicted RBP	6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	KCNQ1DN	Q9H478	68 aa		6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.13	□□□□□ -1.43
UBR1-207	ENST00000568782	LOC107984156	A0A0G2JMH3	177 aa		6.12	□□□□□ -1.43
UBR1-207	ENST00000568782	NDUFC2	O95298	119 aa		6.12	□□□□□ -1.43
UBR1-207	ENST00000568782	AKR1D1	P51857	326 aa		6.12	□□□□□ -1.43
UBR1-207	ENST00000568782	C4orf48	Q5BLP8	95 aa		6.12	□□□□□ -1.43
UBR1-207	ENST00000568782	ARL17A	Q8IVW1	177 aa		6.12	□□□□□ -1.43
UBR1-207	ENST00000568782	LINC00304	Q8N9R0	145 aa		6.12	□□□□□ -1.43
UBR1-207	ENST00000568782		A0A0J9YXY3	114 aa		6.11	□□□□□ -1.43
UBR1-207	ENST00000568782	KRTDAP	P60985	99 aa		6.11	□□□□□ -1.43
UBR1-207	ENST00000568782	JOSD1	Q15040	202 aa	Predicted RBP	6.11	□□□□□ -1.43
UBR1-207	ENST00000568782	LINC01545	Q5VT33	79 aa		6.11	□□□□□ -1.43
UBR1-207	ENST00000568782	HMCN2	Q8NDA2	5059 aa		6.11	□□□□□ -1.43
UBR1-207	ENST00000568782	NPC2	P61916	151 aa		6.1	□□□□□ -1.43
UBR1-207	ENST00000568782	CTAG1A	P78358	180 aa		6.1	□□□□□ -1.43
UBR1-207	ENST00000568782	SMCR5	Q8TEV8	140 aa		6.1	□□□□□ -1.43
UBR1-207	ENST00000568782	ZNF815P	A8K554	130 aa		6.09	□□□□□ -1.43
UBR1-207	ENST00000568782	C3orf79	P0CE67	100 aa		6.09	□□□□□ -1.43
UBR1-207	ENST00000568782	SPRR1A	P35321	89 aa		6.09	□□□□□ -1.43
UBR1-207	ENST00000568782	SPAG11A	Q6PDA7	123 aa		6.09	□□□□□ -1.43
UBR1-207	ENST00000568782	COPS9	Q8WXC6	57 aa		6.09	□□□□□ -1.43
UBR1-207	ENST00000568782	SPRR4	Q96PI1	79 aa		6.09	□□□□□ -1.43
UBR1-207	ENST00000568782	TIMM17B	O60830	172 aa		6.08	□□□□□ -1.44
UBR1-207	ENST00000568782	KRTAP13-2	Q52LG2	175 aa		6.08	□□□□□ -1.44
UBR1-207	ENST00000568782	COA6	Q5JTJ3	125 aa	Known RBP	6.08	□□□□□ -1.44
UBR1-207	ENST00000568782	SCGB1D4	Q6XE38	83 aa		6.08	□□□□□ -1.44
UBR1-207	ENST00000568782	OR13C6P	Q8NH95	151 aa		6.08	□□□□□ -1.44
UBR1-207	ENST00000568782	TRAV23DV6	A0A075B6W5	121 aa		6.07	□□□□□ -1.44
UBR1-207	ENST00000568782	LINC00518	Q8N0U6	118 aa		6.07	□□□□□ -1.44
UBR1-207	ENST00000568782	SPANXC	Q9NY87	97 aa		6.07	□□□□□ -1.44
UBR1-207	ENST00000568782		B5MCH6	92 aa		6.06	□□□□□ -1.44

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