RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ERASQ7Z444 233 aa9.02□□□□□ -0.97
NME3-211ENST00000568561 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
NME3-211ENST00000568561 IGLV5-37A0A075B6J1 123 aa9.01□□□□□ -0.97
NME3-211ENST00000568561 IGLV5-45A0A087WSX0 123 aa9.01□□□□□ -0.97
NME3-211ENST00000568561 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
NME3-211ENST00000568561 PRLHP81277 87 aa9.01□□□□□ -0.97
NME3-211ENST00000568561 C5orf52A6NGY3 159 aa8.99□□□□□ -0.97
NME3-211ENST00000568561 HSBP1O75506 76 aa8.99□□□□□ -0.97
NME3-211ENST00000568561 G0S2P27469 103 aa8.99□□□□□ -0.97
NME3-211ENST00000568561 FAM229BQ4G0N7 80 aa8.99□□□□□ -0.97
NME3-211ENST00000568561 A0A096LNJ9 63 aa8.98□□□□□ -0.97
NME3-211ENST00000568561 PFN2P35080 140 aa8.98□□□□□ -0.97
NME3-211ENST00000568561 CDIP1Q9H305 208 aa8.98□□□□□ -0.97
NME3-211ENST00000568561 CST9LQ9H4G1 147 aa8.98□□□□□ -0.97
NME3-211ENST00000568561 IGKV2D-26A0A0A0MRZ7 120 aa8.97□□□□□ -0.97
NME3-211ENST00000568561 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
NME3-211ENST00000568561 SNRPEP62304 92 aaKnown RBP8.97□□□□□ -0.97
NME3-211ENST00000568561 LINC01549A6NIU2 74 aa8.96□□□□□ -0.98
NME3-211ENST00000568561 HBDP02042 147 aa8.96□□□□□ -0.98
NME3-211ENST00000568561 FAM19A1Q7Z5A9 133 aa8.96□□□□□ -0.98
NME3-211ENST00000568561 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
NME3-211ENST00000568561 FAM19A2Q8N3H0 131 aa8.96□□□□□ -0.98
NME3-211ENST00000568561 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
NME3-211ENST00000568561 ATP5LO75964 103 aa8.95□□□□□ -0.98
NME3-211ENST00000568561 PMCHL1Q16048 86 aa8.95□□□□□ -0.98
NME3-211ENST00000568561 TMEM126AQ9H061 195 aa8.95□□□□□ -0.98
NME3-211ENST00000568561 VPREB1P12018 145 aa8.94□□□□□ -0.98
NME3-211ENST00000568561 PMVKQ15126 192 aa8.94□□□□□ -0.98
NME3-211ENST00000568561 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
NME3-211ENST00000568561 C3orf22Q8N5N4 141 aa8.94□□□□□ -0.98
NME3-211ENST00000568561 S100A2P29034 98 aa8.93□□□□□ -0.98
NME3-211ENST00000568561 Q8NDZ9 215 aa8.93□□□□□ -0.98
NME3-211ENST00000568561 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
NME3-211ENST00000568561 H3BRM9 83 aa8.92□□□□□ -0.98
NME3-211ENST00000568561 M0R378 163 aa8.91□□□□□ -0.98
NME3-211ENST00000568561 LEPROTL1O95214 131 aa8.91□□□□□ -0.98
NME3-211ENST00000568561 ZNF625Q96I27 306 aaPredicted RBP8.91□□□□□ -0.98
NME3-211ENST00000568561 HIST1H2BLQ99880 126 aa8.91□□□□□ -0.98
NME3-211ENST00000568561 ERG28Q9UKR5 140 aa8.91□□□□□ -0.98
NME3-211ENST00000568561 IGLV5-39A0A0G2JS06 123 aa8.9□□□□□ -0.98
NME3-211ENST00000568561 LOC105371267A0A1B0GV96 52 aa8.9□□□□□ -0.98
NME3-211ENST00000568561 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
NME3-211ENST00000568561 PLEKHB2Q96CS7 222 aa8.9□□□□□ -0.98
NME3-211ENST00000568561 KRTAP9-6A0A140TA67 174 aa8.89□□□□□ -0.99
NME3-211ENST00000568561 ZNF22P17026 224 aaPredicted RBP8.89□□□□□ -0.99
NME3-211ENST00000568561 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
NME3-211ENST00000568561 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
NME3-211ENST00000568561 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
NME3-211ENST00000568561 FABP4P15090 132 aa8.88□□□□□ -0.99
NME3-211ENST00000568561 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
NME3-211ENST00000568561 RPL24P83731 157 aaKnown RBP8.87□□□□□ -0.99
NME3-211ENST00000568561 AKR1D1P51857 326 aa8.86□□□□□ -0.99
NME3-211ENST00000568561 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
NME3-211ENST00000568561 SPRR4Q96PI1 79 aa8.84□□□□□ -0.99
NME3-211ENST00000568561 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
NME3-211ENST00000568561 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
NME3-211ENST00000568561 A0A0U1RRA0 63 aa8.83□□□□□ -1
NME3-211ENST00000568561 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
NME3-211ENST00000568561 COX17Q14061 63 aa8.83□□□□□ -1
NME3-211ENST00000568561 C11orf86A6NJI1 115 aa8.82□□□□□ -1
NME3-211ENST00000568561 PET117Q6UWS5 81 aa8.82□□□□□ -1
NME3-211ENST00000568561 DAND5Q8N907 189 aa8.82□□□□□ -1
NME3-211ENST00000568561 CTAG1AP78358 180 aa8.81□□□□□ -1
NME3-211ENST00000568561 TMEM170BQ5T4T1 132 aa8.81□□□□□ -1
NME3-211ENST00000568561 LINC00158P58513 81 aa8.8□□□□□ -1
NME3-211ENST00000568561 KRTDAPP60985 99 aa8.8□□□□□ -1
NME3-211ENST00000568561 LINC01545Q5VT33 79 aa8.8□□□□□ -1
NME3-211ENST00000568561 Q8NBF4 154 aa8.8□□□□□ -1
NME3-211ENST00000568561 SMIM6P0DI80 62 aa8.79□□□□□ -1
NME3-211ENST00000568561 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
NME3-211ENST00000568561 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
NME3-211ENST00000568561 FP248Q71RG6 208 aaPredicted RBP8.78□□□□□ -1
NME3-211ENST00000568561 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
NME3-211ENST00000568561 H0Y8G0 127 aa8.77□□□□□ -1.01
NME3-211ENST00000568561 NCR3O14931 201 aa8.77□□□□□ -1.01
NME3-211ENST00000568561 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
NME3-211ENST00000568561 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
NME3-211ENST00000568561 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
NME3-211ENST00000568561 JOSD1Q15040 202 aaPredicted RBP8.76□□□□□ -1.01
NME3-211ENST00000568561 KRTAP4-1Q9BYQ7 146 aa8.76□□□□□ -1.01
NME3-211ENST00000568561 C20orf202A1L168 122 aa8.75□□□□□ -1.01
NME3-211ENST00000568561 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
NME3-211ENST00000568561 PRYO14603 147 aa8.74□□□□□ -1.01
NME3-211ENST00000568561 SMIM13P0DJ93 91 aa8.74□□□□□ -1.01
NME3-211ENST00000568561 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
NME3-211ENST00000568561 BOD1L2Q8IYS8 172 aa8.74□□□□□ -1.01
NME3-211ENST00000568561 SMCR5Q8TEV8 140 aa8.74□□□□□ -1.01
NME3-211ENST00000568561 DPM2O94777 84 aa8.73□□□□□ -1.01
NME3-211ENST00000568561 PLNP26678 52 aa8.73□□□□□ -1.01
NME3-211ENST00000568561 PYY3Q5JQD4 70 aa8.73□□□□□ -1.01
NME3-211ENST00000568561 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
NME3-211ENST00000568561 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
NME3-211ENST00000568561 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
NME3-211ENST00000568561 SCGB1D1O95968 90 aa8.72□□□□□ -1.01
NME3-211ENST00000568561 IGKCP01834 107 aa8.72□□□□□ -1.01
NME3-211ENST00000568561 ETDCA0A1B0GVM5 59 aa8.71□□□□□ -1.02
NME3-211ENST00000568561 SPRR1AP35321 89 aa8.71□□□□□ -1.02
NME3-211ENST00000568561 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.02
NME3-211ENST00000568561 LINC00518Q8N0U6 118 aa8.71□□□□□ -1.02
NME3-211ENST00000568561 MIR7-3HGQ8N6C7 128 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms