RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CDIP1Q9H305 208 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 XAGE1AQ9HD64 81 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 TRBV30A0A0K0K1B3 111 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 TRBV20-1A0A075B6N2 111 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 USP17L23D6RBM5 183 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 PSCAO43653 123 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
SMG1-215ENST00000568239 PLECQ15149 4684 aaKnown RBP4.67□□□□□ -1.66
SMG1-215ENST00000568239 GAGE2EQ4V326 116 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 CLEC2BQ92478 149 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 GAGE2DQ9UEU5 116 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 NCR3O14931 201 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 SYCNQ0VAF6 134 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 WFDC2Q14508 124 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 FBN3Q75N90 2809 aa4.67□□□□□ -1.66
SMG1-215ENST00000568239 GVQW2A0A096LPI5 108 aaPredicted RBP4.66□□□□□ -1.66
SMG1-215ENST00000568239 ATXN8Q156A1 80 aa4.66□□□□□ -1.66
SMG1-215ENST00000568239 C2orf48Q96LS8 159 aa4.66□□□□□ -1.66
SMG1-215ENST00000568239 PPDPFQ9H3Y8 114 aa4.66□□□□□ -1.66
SMG1-215ENST00000568239 DNAH7Q8WXX0 4024 aa4.66□□□□□ -1.66
SMG1-215ENST00000568239 C9JAW5 83 aa4.65□□□□□ -1.66
SMG1-215ENST00000568239 F8W1H4 67 aa4.65□□□□□ -1.66
SMG1-215ENST00000568239 STARD9Q9P2P6 4700 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 M0R2N4 97 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 SMIM11BQ8TCY0 68 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 NDUFC2-KCTD14E9PQ53 114 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 RPL18AQ02543 176 aaKnown RBP4.65□□□□□ -1.67
SMG1-215ENST00000568239 ETDBQ3ZM63 59 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 Q8NDZ9 215 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 CARD19Q96LW7 228 aa4.65□□□□□ -1.67
SMG1-215ENST00000568239 DNAH10Q8IVF4 4471 aa4.64□□□□□ -1.67
SMG1-215ENST00000568239 NDUFC2O95298 119 aa4.64□□□□□ -1.67
SMG1-215ENST00000568239 Q6ZRP5 223 aa4.64□□□□□ -1.67
SMG1-215ENST00000568239 SLPIP03973 132 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 LINC01620Q4KN68 170 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 MUC7Q8TAX7 377 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 NBDYA0A0U1RRE5 68 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 SLC25A20O43772 301 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
SMG1-215ENST00000568239 TMEM126AQ9H061 195 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 DNAH1Q9P2D7 4330 aa4.63□□□□□ -1.67
SMG1-215ENST00000568239 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.62□□□□□ -1.67
SMG1-215ENST00000568239 SMCPP49901 116 aaPredicted RBP4.62□□□□□ -1.67
SMG1-215ENST00000568239 TTC32Q5I0X7 151 aa4.62□□□□□ -1.67
SMG1-215ENST00000568239 LST1O00453 97 aa4.62□□□□□ -1.67
SMG1-215ENST00000568239 LCE2BO14633 110 aa4.62□□□□□ -1.67
SMG1-215ENST00000568239 GAGE2BQ13066 116 aa4.62□□□□□ -1.67
SMG1-215ENST00000568239 OCIAD2Q56VL3 154 aa4.62□□□□□ -1.67
SMG1-215ENST00000568239 FAM218AQ96MZ4 157 aa4.61□□□□□ -1.67
SMG1-215ENST00000568239 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
SMG1-215ENST00000568239 A0A1B0GV72 72 aa4.61□□□□□ -1.67
SMG1-215ENST00000568239 RNF151Q2KHN1 245 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 ANKRD29Q8N6D5 301 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 TRBV10-3A0A0K0K1G6 114 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 TRBV10-2A0A0K0K1G8 114 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 K7ERU9 68 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 LY6G6CO95867 125 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 DNAL4O96015 105 aa4.6□□□□□ -1.67
SMG1-215ENST00000568239 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
SMG1-215ENST00000568239 A0A087WYN8 130 aa4.59□□□□□ -1.67
SMG1-215ENST00000568239 H0YGX0 51 aa4.59□□□□□ -1.67
SMG1-215ENST00000568239 VPREB1P12018 145 aa4.59□□□□□ -1.67
SMG1-215ENST00000568239 NKAPP1Q8N9T2 125 aa4.59□□□□□ -1.67
SMG1-215ENST00000568239 IGKV2-24A0A0C4DH68 120 aa4.59□□□□□ -1.68
SMG1-215ENST00000568239 FAM168BA1KXE4 195 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 TEN1Q86WV5 123 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 TRAV23DV6A0A075B6W5 121 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 IGLV6-57P01721 117 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 TRACP01848 142 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 SERTAD4-AS1Q5TG53 156 aa4.58□□□□□ -1.68
SMG1-215ENST00000568239 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
SMG1-215ENST00000568239 M0R378 163 aa4.57□□□□□ -1.68
SMG1-215ENST00000568239 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
SMG1-215ENST00000568239 BAALC-AS2P0C853 105 aa4.57□□□□□ -1.68
SMG1-215ENST00000568239 FAM19A5Q7Z5A7 132 aaPredicted RBP4.57□□□□□ -1.68
SMG1-215ENST00000568239 KMT2AQ03164 3969 aa4.57□□□□□ -1.68
SMG1-215ENST00000568239 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 H3BT86 120 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 J3QR89 54 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 DIRC1Q969H9 104 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 RPL37AP8A6NKH3 93 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 ZNF73O43830 326 aaPredicted RBP4.56□□□□□ -1.68
SMG1-215ENST00000568239 SNCGO76070 127 aa4.56□□□□□ -1.68
SMG1-215ENST00000568239 LRCOL1A6NCL2 159 aa4.55□□□□□ -1.68
SMG1-215ENST00000568239 CNBPP62633 177 aaKnown RBP4.55□□□□□ -1.68
SMG1-215ENST00000568239 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
SMG1-215ENST00000568239 PPDPFLQ8WWR9 84 aa4.55□□□□□ -1.68
SMG1-215ENST00000568239 A0A096LNI7 61 aa4.55□□□□□ -1.68
SMG1-215ENST00000568239 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
SMG1-215ENST00000568239 FUSP35637 526 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMG1-215ENST00000568239 Q8N814 137 aa4.54□□□□□ -1.68
SMG1-215ENST00000568239 DPH3Q96FX2 82 aa4.54□□□□□ -1.68
SMG1-215ENST00000568239 C22orf24Q9Y442 160 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms