RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 ZNF815PA8K554 130 aa12.71□□□□□ -0.37
RNF40-210ENST00000566811 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.37
RNF40-210ENST00000566811 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.37
RNF40-210ENST00000566811 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
RNF40-210ENST00000566811 FAT1Q14517 4588 aa12.71□□□□□ -0.38
RNF40-210ENST00000566811 TIMM17BO60830 172 aa12.7□□□□□ -0.38
RNF40-210ENST00000566811 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
RNF40-210ENST00000566811 ANKRD39Q53RE8 183 aa12.69□□□□□ -0.38
RNF40-210ENST00000566811 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
RNF40-210ENST00000566811 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
RNF40-210ENST00000566811 SERTAD4-AS1Q5TG53 156 aa12.68□□□□□ -0.38
RNF40-210ENST00000566811 NKAPP1Q8N9T2 125 aa12.68□□□□□ -0.38
RNF40-210ENST00000566811 MIEN1Q9BRT3 115 aa12.67□□□□□ -0.38
RNF40-210ENST00000566811 LOC107984156A0A0G2JMH3 177 aa12.66□□□□□ -0.38
RNF40-210ENST00000566811 A0A0U1RRA0 63 aa12.66□□□□□ -0.38
RNF40-210ENST00000566811 INAFM2P0DMQ5 153 aa12.66□□□□□ -0.38
RNF40-210ENST00000566811 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
RNF40-210ENST00000566811 PHF5AQ7RTV0 110 aaKnown RBP12.66□□□□□ -0.38
RNF40-210ENST00000566811 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
RNF40-210ENST00000566811 KRTAP7-1Q8IUC3 87 aa12.66□□□□□ -0.38
RNF40-210ENST00000566811 ARL17AQ8IVW1 177 aa12.66□□□□□ -0.38
RNF40-210ENST00000566811 C22orf24Q9Y442 160 aa12.66□□□□□ -0.38
RNF40-210ENST00000566811 UBE2BP63146 152 aa12.65□□□□□ -0.38
RNF40-210ENST00000566811 VPREB1P12018 145 aa12.64□□□□□ -0.39
RNF40-210ENST00000566811 SCGB1D4Q6XE38 83 aa12.64□□□□□ -0.39
RNF40-210ENST00000566811 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
RNF40-210ENST00000566811 TMEM238C9JI98 176 aa12.63□□□□□ -0.39
RNF40-210ENST00000566811 PRR3P79522 188 aaKnown RBP12.63□□□□□ -0.39
RNF40-210ENST00000566811 COPS9Q8WXC6 57 aa12.63□□□□□ -0.39
RNF40-210ENST00000566811 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
RNF40-210ENST00000566811 KRTAP10-4P60372 401 aaPredicted RBP12.61□□□□□ -0.39
RNF40-210ENST00000566811 Q6ZVH6 145 aa12.61□□□□□ -0.39
RNF40-210ENST00000566811 BOD1L2Q8IYS8 172 aa12.61□□□□□ -0.39
RNF40-210ENST00000566811 TTTY13Q9BZ97 58 aa12.61□□□□□ -0.39
RNF40-210ENST00000566811 NDUFC2O95298 119 aa12.59□□□□□ -0.39
RNF40-210ENST00000566811 PCP2Q8IVA1 136 aa12.59□□□□□ -0.39
RNF40-210ENST00000566811 DAND5Q8N907 189 aa12.59□□□□□ -0.39
RNF40-210ENST00000566811 LITAFQ99732 161 aa12.59□□□□□ -0.39
RNF40-210ENST00000566811 PPDPFQ9H3Y8 114 aa12.59□□□□□ -0.39
RNF40-210ENST00000566811 PSORS1C2Q9UIG4 136 aa12.59□□□□□ -0.39
RNF40-210ENST00000566811 MYCBP2O75592 4640 aa12.58□□□□□ -0.4
RNF40-210ENST00000566811 VAMP8Q9BV40 100 aa12.58□□□□□ -0.4
RNF40-210ENST00000566811 SPANXDQ9BXN6 97 aa12.58□□□□□ -0.4
RNF40-210ENST00000566811 SPANXCQ9NY87 97 aa12.58□□□□□ -0.4
RNF40-210ENST00000566811 LINC00167Q96N53 147 aa12.57□□□□□ -0.4
RNF40-210ENST00000566811 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
RNF40-210ENST00000566811 M0R378 163 aa12.56□□□□□ -0.4
RNF40-210ENST00000566811 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
RNF40-210ENST00000566811 SPANXB1Q9NS25 103 aaPredicted RBP12.56□□□□□ -0.4
RNF40-210ENST00000566811 DLEU1O43261 78 aa12.54□□□□□ -0.4
RNF40-210ENST00000566811 COX8AP10176 69 aa12.54□□□□□ -0.4
RNF40-210ENST00000566811 IFITM1P13164 125 aa12.54□□□□□ -0.4
RNF40-210ENST00000566811 LINC00308Q8TCZ7 52 aa12.54□□□□□ -0.4
RNF40-210ENST00000566811 PYY3Q5JQD4 70 aa12.53□□□□□ -0.4
RNF40-210ENST00000566811 C1orf137Q5JT78 98 aa12.53□□□□□ -0.4
RNF40-210ENST00000566811 Q8NDZ9 215 aa12.53□□□□□ -0.4
RNF40-210ENST00000566811 IGLV1-50A0A075B6I6 118 aa12.52□□□□□ -0.41
RNF40-210ENST00000566811 S100A12P80511 92 aa12.52□□□□□ -0.41
RNF40-210ENST00000566811 SPATA45Q537H7 98 aa12.52□□□□□ -0.41
RNF40-210ENST00000566811 PAM16Q9Y3D7 125 aa12.52□□□□□ -0.41
RNF40-210ENST00000566811 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
RNF40-210ENST00000566811 SOSTDC1Q6X4U4 206 aa12.5□□□□□ -0.41
RNF40-210ENST00000566811 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
RNF40-210ENST00000566811 IGKV2-28A0A075B6P5 120 aa12.49□□□□□ -0.41
RNF40-210ENST00000566811 RPL37AP8A6NKH3 93 aa12.49□□□□□ -0.41
RNF40-210ENST00000566811 IGKV2D-28P01615 120 aa12.49□□□□□ -0.41
RNF40-210ENST00000566811 IGLV7-43P04211 117 aa12.49□□□□□ -0.41
RNF40-210ENST00000566811 SPINK6Q6UWN8 80 aa12.49□□□□□ -0.41
RNF40-210ENST00000566811 KRTAP11-1Q8IUC1 163 aa12.49□□□□□ -0.41
RNF40-210ENST00000566811 NCR3O14931 201 aa12.48□□□□□ -0.41
RNF40-210ENST00000566811 BCE1O60756 84 aa12.48□□□□□ -0.41
RNF40-210ENST00000566811 NPC2P61916 151 aa12.48□□□□□ -0.41
RNF40-210ENST00000566811 LINC00518Q8N0U6 118 aa12.47□□□□□ -0.41
RNF40-210ENST00000566811 PRYO14603 147 aa12.46□□□□□ -0.41
RNF40-210ENST00000566811 SLC25A34Q6PIV7 304 aa12.46□□□□□ -0.41
RNF40-210ENST00000566811 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
RNF40-210ENST00000566811 SRSF9Q13242 221 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNF40-210ENST00000566811 S100A7L2Q5SY68 101 aa12.44□□□□□ -0.42
RNF40-210ENST00000566811 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
RNF40-210ENST00000566811 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
RNF40-210ENST00000566811 PKHD1L1Q86WI1 4243 aa12.43□□□□□ -0.42
RNF40-210ENST00000566811 EIF4EBP3O60516 100 aaPredicted RBP12.43□□□□□ -0.42
RNF40-210ENST00000566811 DDTP30046 118 aa12.43□□□□□ -0.42
RNF40-210ENST00000566811 RPL28P46779 137 aaKnown RBP12.43□□□□□ -0.42
RNF40-210ENST00000566811 HNRNPA3P51991 378 aaKnown RBP12.43□□□□□ -0.42
RNF40-210ENST00000566811 DIRC1Q969H9 104 aa12.43□□□□□ -0.42
RNF40-210ENST00000566811 HIGD1BQ9P298 99 aa12.43□□□□□ -0.42
RNF40-210ENST00000566811 TRBV10-3A0A0K0K1G6 114 aa12.42□□□□□ -0.42
RNF40-210ENST00000566811 IGLV6-57P01721 117 aa12.42□□□□□ -0.42
RNF40-210ENST00000566811 ZNF861PO60384 105 aa12.41□□□□□ -0.42
RNF40-210ENST00000566811 C14orf144Q96I85 54 aa12.41□□□□□ -0.42
RNF40-210ENST00000566811 MUSTN1Q8IVN3 82 aa12.4□□□□□ -0.42
RNF40-210ENST00000566811 SMIM6P0DI80 62 aa12.39□□□□□ -0.43
RNF40-210ENST00000566811 SPRR1AP35321 89 aa12.39□□□□□ -0.43
RNF40-210ENST00000566811 UBE2AP49459 152 aa12.39□□□□□ -0.43
RNF40-210ENST00000566811 LINC00337Q8N6G1 96 aa12.39□□□□□ -0.43
RNF40-210ENST00000566811 H0Y9J4 135 aa12.38□□□□□ -0.43
RNF40-210ENST00000566811 HIST1H4GQ99525 98 aa12.38□□□□□ -0.43
RNF40-210ENST00000566811 J3QL48 77 aa12.37□□□□□ -0.43
RNF40-210ENST00000566811 OXTP01178 125 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms