RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
KARS-207ENST00000566560 CIRBP-AS1Q8TBR5 109 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 TTTY13Q9BZ97 58 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 XAGE1AQ9HD64 81 aa7.28□□□□□ -1.24
KARS-207ENST00000566560 SMIM13P0DJ93 91 aa7.27□□□□□ -1.25
KARS-207ENST00000566560 LINC00158P58513 81 aa7.27□□□□□ -1.25
KARS-207ENST00000566560 C9orf129Q5T035 196 aaKnown RBP7.27□□□□□ -1.25
KARS-207ENST00000566560 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
KARS-207ENST00000566560 LINC00587B1AMM8 73 aa7.26□□□□□ -1.25
KARS-207ENST00000566560 PYY3Q5JQD4 70 aa7.26□□□□□ -1.25
KARS-207ENST00000566560 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
KARS-207ENST00000566560 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
KARS-207ENST00000566560 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 FAM19A5Q7Z5A7 132 aaPredicted RBP7.25□□□□□ -1.25
KARS-207ENST00000566560 PCP2Q8IVA1 136 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 VAMP8Q9BV40 100 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 SND1-IT1Q9HBX3 110 aa7.25□□□□□ -1.25
KARS-207ENST00000566560 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
KARS-207ENST00000566560 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
KARS-207ENST00000566560 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
KARS-207ENST00000566560 B5MCH6 92 aa7.23□□□□□ -1.25
KARS-207ENST00000566560 DAND5Q8N907 189 aa7.23□□□□□ -1.25
KARS-207ENST00000566560 M0QXV9 152 aa7.22□□□□□ -1.25
KARS-207ENST00000566560 SPATA45Q537H7 98 aa7.22□□□□□ -1.25
KARS-207ENST00000566560 SERTAD4-AS1Q5TG53 156 aa7.22□□□□□ -1.25
KARS-207ENST00000566560 TIMM17BO60830 172 aa7.21□□□□□ -1.26
KARS-207ENST00000566560 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.26
KARS-207ENST00000566560 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
KARS-207ENST00000566560 HSPG2P98160 4391 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 KIAA1109Q2LD37 5005 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 LITAFQ99732 161 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 TP73-AS1Q9UF72 201 aa7.2□□□□□ -1.26
KARS-207ENST00000566560 COX8AP10176 69 aa7.19□□□□□ -1.26
KARS-207ENST00000566560 NPC2P61916 151 aa7.19□□□□□ -1.26
KARS-207ENST00000566560 ADAMTSL4-AS1Q5T5F5 129 aa7.19□□□□□ -1.26
KARS-207ENST00000566560 PHF5AQ7RTV0 110 aaKnown RBP7.19□□□□□ -1.26
KARS-207ENST00000566560 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
KARS-207ENST00000566560 NKAPP1Q8N9T2 125 aa7.19□□□□□ -1.26
KARS-207ENST00000566560 VPREB1P12018 145 aa7.18□□□□□ -1.26
KARS-207ENST00000566560 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
KARS-207ENST00000566560 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
KARS-207ENST00000566560 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 SMIM6P0DI80 62 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 UBE2BP63146 152 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 S100A12P80511 92 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 Q5VSD8 79 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 SOSTDC1Q6X4U4 206 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 MRPL55Q7Z7F7 128 aaKnown RBP7.17□□□□□ -1.26
KARS-207ENST00000566560 Q8N1X5 172 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 Q8NDZ9 215 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 SPANXCQ9NY87 97 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 C22orf24Q9Y442 160 aa7.17□□□□□ -1.26
KARS-207ENST00000566560 RYR1P21817 5038 aa7.16□□□□□ -1.26
KARS-207ENST00000566560 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
KARS-207ENST00000566560 DLEU1O43261 78 aa7.16□□□□□ -1.26
KARS-207ENST00000566560 LBHQ53QV2 105 aaPredicted RBP7.16□□□□□ -1.26
KARS-207ENST00000566560 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
KARS-207ENST00000566560 LOC107984156A0A0G2JMH3 177 aa7.15□□□□□ -1.26
KARS-207ENST00000566560 GAGE10A6NGK3 116 aa7.15□□□□□ -1.26
KARS-207ENST00000566560 RPL37AP61513 92 aaKnown RBP7.15□□□□□ -1.26
KARS-207ENST00000566560 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.26
KARS-207ENST00000566560 ARL17AQ8IVW1 177 aa7.15□□□□□ -1.26
KARS-207ENST00000566560 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
KARS-207ENST00000566560 NCR3O14931 201 aa7.14□□□□□ -1.27
KARS-207ENST00000566560 Q6ZVH6 145 aa7.14□□□□□ -1.27
KARS-207ENST00000566560 COPS9Q8WXC6 57 aa7.14□□□□□ -1.27
KARS-207ENST00000566560 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
KARS-207ENST00000566560 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
KARS-207ENST00000566560 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
KARS-207ENST00000566560 IFITM1P13164 125 aa7.13□□□□□ -1.27
KARS-207ENST00000566560 PRR3P79522 188 aaKnown RBP7.13□□□□□ -1.27
KARS-207ENST00000566560 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
KARS-207ENST00000566560 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
KARS-207ENST00000566560 M0R378 163 aa7.12□□□□□ -1.27
KARS-207ENST00000566560 NDUFC2O95298 119 aa7.12□□□□□ -1.27
KARS-207ENST00000566560 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
KARS-207ENST00000566560 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
KARS-207ENST00000566560 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
KARS-207ENST00000566560 RPL37AP8A6NKH3 93 aa7.11□□□□□ -1.27
KARS-207ENST00000566560 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
KARS-207ENST00000566560 C2orf91Q6ZV80 131 aa7.11□□□□□ -1.27
KARS-207ENST00000566560 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
KARS-207ENST00000566560 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
KARS-207ENST00000566560 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
KARS-207ENST00000566560 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
KARS-207ENST00000566560 HIST1H4GQ99525 98 aa7.1□□□□□ -1.27
KARS-207ENST00000566560 HIGD1BQ9P298 99 aa7.1□□□□□ -1.27
KARS-207ENST00000566560 FAT1Q14517 4588 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms