RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
FANCA-220ENST00000566409 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
FANCA-220ENST00000566409 UBE2AP49459 152 aa8.63□□□□□ -1.03
FANCA-220ENST00000566409 A0A0U1RRA0 63 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 M0R378 163 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 HSBP1O75506 76 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 LINC00158P58513 81 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 PRLHP81277 87 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 RPL24P83731 157 aaKnown RBP8.62□□□□□ -1.03
FANCA-220ENST00000566409 KRTAP13-2Q52LG2 175 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
FANCA-220ENST00000566409 A6NJY4 79 aa8.61□□□□□ -1.03
FANCA-220ENST00000566409 CRYGAP11844 174 aa8.61□□□□□ -1.03
FANCA-220ENST00000566409 SERF1AO75920 110 aa8.6□□□□□ -1.03
FANCA-220ENST00000566409 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
FANCA-220ENST00000566409 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
FANCA-220ENST00000566409 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
FANCA-220ENST00000566409 TSPAN13O95857 204 aa8.59□□□□□ -1.03
FANCA-220ENST00000566409 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
FANCA-220ENST00000566409 COLCA2A8K830 154 aa8.58□□□□□ -1.04
FANCA-220ENST00000566409 H0Y8G0 127 aa8.58□□□□□ -1.04
FANCA-220ENST00000566409 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
FANCA-220ENST00000566409 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
FANCA-220ENST00000566409 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
FANCA-220ENST00000566409 TSPEAR-AS2P59090 65 aa8.57□□□□□ -1.04
FANCA-220ENST00000566409 PRR4Q16378 134 aa8.57□□□□□ -1.04
FANCA-220ENST00000566409 FAM229BQ4G0N7 80 aa8.57□□□□□ -1.04
FANCA-220ENST00000566409 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
FANCA-220ENST00000566409 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
FANCA-220ENST00000566409 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
FANCA-220ENST00000566409 FABP4P15090 132 aa8.54□□□□□ -1.04
FANCA-220ENST00000566409 HERV-K104P63124 156 aa8.54□□□□□ -1.04
FANCA-220ENST00000566409 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
FANCA-220ENST00000566409 BOD1L2Q8IYS8 172 aa8.54□□□□□ -1.04
FANCA-220ENST00000566409 MUC2Q02817 5179 aa8.53□□□□□ -1.04
FANCA-220ENST00000566409 PMCHL2Q9BQD1 86 aa8.53□□□□□ -1.04
FANCA-220ENST00000566409 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
FANCA-220ENST00000566409 LEPROTO15243 131 aa8.52□□□□□ -1.05
FANCA-220ENST00000566409 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
FANCA-220ENST00000566409 NCR3O14931 201 aa8.51□□□□□ -1.05
FANCA-220ENST00000566409 PLNP26678 52 aa8.51□□□□□ -1.05
FANCA-220ENST00000566409 DAND5Q8N907 189 aa8.51□□□□□ -1.05
FANCA-220ENST00000566409 HIGD2AQ9BW72 106 aa8.51□□□□□ -1.05
FANCA-220ENST00000566409 HSPB8Q9UJY1 196 aa8.51□□□□□ -1.05
FANCA-220ENST00000566409 KRTAP4-16G5E9R7 235 aaPredicted RBP8.5□□□□□ -1.05
FANCA-220ENST00000566409 SPRR1AP35321 89 aa8.5□□□□□ -1.05
FANCA-220ENST00000566409 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
FANCA-220ENST00000566409 KCNQ1DNQ9H478 68 aa8.5□□□□□ -1.05
FANCA-220ENST00000566409 IGKV2D-26A0A0A0MRZ7 120 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 TRBV10-3A0A0K0K1G6 114 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 J3QQQ9 107 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 PRYO14603 147 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 DPM2O94777 84 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 LINC00304Q8N9R0 145 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
FANCA-220ENST00000566409 IGKCP01834 107 aa8.47□□□□□ -1.05
FANCA-220ENST00000566409 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
FANCA-220ENST00000566409 RETNLBQ9BQ08 111 aa8.47□□□□□ -1.05
FANCA-220ENST00000566409 MAP1LC3CQ9BXW4 147 aa8.47□□□□□ -1.05
FANCA-220ENST00000566409 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BKO60814 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BJP06899 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BOP23527 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BBP33778 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BDP58876 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BCP62807 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST2H2BEQ16778 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.45□□□□□ -1.06
FANCA-220ENST00000566409 SMCR5Q8TEV8 140 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BHQ93079 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BNQ99877 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 HIST1H2BMQ99879 126 aa8.45□□□□□ -1.06
FANCA-220ENST00000566409 NMUP48645 174 aa8.44□□□□□ -1.06
FANCA-220ENST00000566409 HERVK_113P61574 105 aa8.44□□□□□ -1.06
FANCA-220ENST00000566409 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
FANCA-220ENST00000566409 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
FANCA-220ENST00000566409 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
FANCA-220ENST00000566409 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
FANCA-220ENST00000566409 TRBV10-2A0A0K0K1G8 114 aa8.42□□□□□ -1.06
FANCA-220ENST00000566409 ETDCA0A1B0GVM5 59 aa8.42□□□□□ -1.06
FANCA-220ENST00000566409 B5MCH6 92 aa8.42□□□□□ -1.06
FANCA-220ENST00000566409 E9PLD3 99 aa8.41□□□□□ -1.06
FANCA-220ENST00000566409 SYS1-DBNDD2H3BUS1 97 aa8.41□□□□□ -1.06
FANCA-220ENST00000566409 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
FANCA-220ENST00000566409 DDTP30046 118 aa8.41□□□□□ -1.06
FANCA-220ENST00000566409 IGLV6-57P01721 117 aa8.4□□□□□ -1.06
FANCA-220ENST00000566409 CTAG1AP78358 180 aa8.4□□□□□ -1.06
FANCA-220ENST00000566409 PPDPFQ9H3Y8 114 aa8.4□□□□□ -1.06
FANCA-220ENST00000566409 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
FANCA-220ENST00000566409 ZNF706Q9Y5V0 76 aaPredicted RBP8.4□□□□□ -1.06
FANCA-220ENST00000566409 NDUFC2O95298 119 aa8.39□□□□□ -1.07
FANCA-220ENST00000566409 NPC2P61916 151 aa8.39□□□□□ -1.07
FANCA-220ENST00000566409 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
FANCA-220ENST00000566409 LINC01545Q5VT33 79 aa8.39□□□□□ -1.07
FANCA-220ENST00000566409 Q9BRP9 147 aa8.39□□□□□ -1.07
FANCA-220ENST00000566409 LITAFQ99732 161 aa8.38□□□□□ -1.07
FANCA-220ENST00000566409 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms