RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.18
RNF40-208ENST00000565995 VAMP8Q9BV40 100 aa7.65□□□□□ -1.18
RNF40-208ENST00000565995 F8WDY8 70 aa7.64□□□□□ -1.19
RNF40-208ENST00000565995 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
RNF40-208ENST00000565995 LGALS3P17931 250 aaKnown RBP7.64□□□□□ -1.19
RNF40-208ENST00000565995 NMUP48645 174 aa7.64□□□□□ -1.19
RNF40-208ENST00000565995 PRR4Q16378 134 aa7.64□□□□□ -1.19
RNF40-208ENST00000565995 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
RNF40-208ENST00000565995 TLX1NBP0CAT3 122 aa7.63□□□□□ -1.19
RNF40-208ENST00000565995 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
RNF40-208ENST00000565995 CKS1BP61024 79 aa7.63□□□□□ -1.19
RNF40-208ENST00000565995 RPL18AQ02543 176 aaKnown RBP7.63□□□□□ -1.19
RNF40-208ENST00000565995 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
RNF40-208ENST00000565995 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
RNF40-208ENST00000565995 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 E9PLD3 99 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 LEPROTO15243 131 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 S100A12P80511 92 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 ANKRD39Q53RE8 183 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 Q8IZM0 81 aa7.62□□□□□ -1.19
RNF40-208ENST00000565995 J3QQQ9 107 aa7.61□□□□□ -1.19
RNF40-208ENST00000565995 SPATA45Q537H7 98 aa7.61□□□□□ -1.19
RNF40-208ENST00000565995 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
RNF40-208ENST00000565995 CXCL5P42830 114 aa7.6□□□□□ -1.19
RNF40-208ENST00000565995 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
RNF40-208ENST00000565995 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
RNF40-208ENST00000565995 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
RNF40-208ENST00000565995 NDUFA1O15239 70 aa7.59□□□□□ -1.19
RNF40-208ENST00000565995 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
RNF40-208ENST00000565995 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
RNF40-208ENST00000565995 ZNF815PA8K554 130 aa7.58□□□□□ -1.2
RNF40-208ENST00000565995 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
RNF40-208ENST00000565995 KIAA0087Q14695 138 aa7.57□□□□□ -1.2
RNF40-208ENST00000565995 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
RNF40-208ENST00000565995 ZNF625Q96I27 306 aaPredicted RBP7.57□□□□□ -1.2
RNF40-208ENST00000565995 C12orf57Q99622 126 aa7.57□□□□□ -1.2
RNF40-208ENST00000565995 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
RNF40-208ENST00000565995 MEIG1Q5JSS6 88 aa7.56□□□□□ -1.2
RNF40-208ENST00000565995 C10orf25Q5T742 122 aa7.56□□□□□ -1.2
RNF40-208ENST00000565995 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
RNF40-208ENST00000565995 UNQ6190/PRO20217Q6UXQ8 127 aa7.55□□□□□ -1.2
RNF40-208ENST00000565995 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
RNF40-208ENST00000565995 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
RNF40-208ENST00000565995 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
RNF40-208ENST00000565995 HERV-K104P63124 156 aa7.54□□□□□ -1.2
RNF40-208ENST00000565995 FAM19A5Q7Z5A7 132 aaPredicted RBP7.54□□□□□ -1.2
RNF40-208ENST00000565995 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
RNF40-208ENST00000565995 TRBV30A0A0K0K1B3 111 aa7.53□□□□□ -1.2
RNF40-208ENST00000565995 M0QXV9 152 aa7.53□□□□□ -1.2
RNF40-208ENST00000565995 ZNF861PO60384 105 aa7.53□□□□□ -1.2
RNF40-208ENST00000565995 COX8AP10176 69 aa7.53□□□□□ -1.2
RNF40-208ENST00000565995 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
RNF40-208ENST00000565995 ERG28Q9UKR5 140 aa7.53□□□□□ -1.2
RNF40-208ENST00000565995 A0A0U1RRA0 63 aa7.52□□□□□ -1.21
RNF40-208ENST00000565995 PFN2P35080 140 aa7.52□□□□□ -1.21
RNF40-208ENST00000565995 SLC25A34Q6PIV7 304 aa7.52□□□□□ -1.21
RNF40-208ENST00000565995 PRO1933Q9H354 126 aa7.52□□□□□ -1.21
RNF40-208ENST00000565995 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
RNF40-208ENST00000565995 LINC00158P58513 81 aa7.51□□□□□ -1.21
RNF40-208ENST00000565995 UBE2BP63146 152 aa7.51□□□□□ -1.21
RNF40-208ENST00000565995 GAGE2EQ4V326 116 aa7.51□□□□□ -1.21
RNF40-208ENST00000565995 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
RNF40-208ENST00000565995 GAGE2DQ9UEU5 116 aa7.51□□□□□ -1.21
RNF40-208ENST00000565995 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
RNF40-208ENST00000565995 TSPAN13O95857 204 aa7.5□□□□□ -1.21
RNF40-208ENST00000565995 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
RNF40-208ENST00000565995 C9orf129Q5T035 196 aaKnown RBP7.5□□□□□ -1.21
RNF40-208ENST00000565995 BOD1L2Q8IYS8 172 aa7.5□□□□□ -1.21
RNF40-208ENST00000565995 TMEM238C9JI98 176 aa7.49□□□□□ -1.21
RNF40-208ENST00000565995 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
RNF40-208ENST00000565995 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
RNF40-208ENST00000565995 UQCR10Q9UDW1 63 aa7.49□□□□□ -1.21
RNF40-208ENST00000565995 A0A087X002 238 aa7.48□□□□□ -1.21
RNF40-208ENST00000565995 DLEU1O43261 78 aa7.48□□□□□ -1.21
RNF40-208ENST00000565995 COX17Q14061 63 aa7.47□□□□□ -1.21
RNF40-208ENST00000565995 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
RNF40-208ENST00000565995 DAND5Q8N907 189 aa7.47□□□□□ -1.21
RNF40-208ENST00000565995 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
RNF40-208ENST00000565995 TIMM17BO60830 172 aa7.46□□□□□ -1.22
RNF40-208ENST00000565995 NPC2P61916 151 aa7.46□□□□□ -1.22
RNF40-208ENST00000565995 CRYGAP11844 174 aa7.45□□□□□ -1.22
RNF40-208ENST00000565995 CTAG1AP78358 180 aa7.45□□□□□ -1.22
RNF40-208ENST00000565995 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
RNF40-208ENST00000565995 XAGE1AQ9HD64 81 aa7.45□□□□□ -1.22
RNF40-208ENST00000565995 C2orf91Q6ZV80 131 aa7.44□□□□□ -1.22
RNF40-208ENST00000565995 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
RNF40-208ENST00000565995 HIST1H4GQ99525 98 aa7.44□□□□□ -1.22
RNF40-208ENST00000565995 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
RNF40-208ENST00000565995 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
RNF40-208ENST00000565995 ADAMTSL4-AS1Q5T5F5 129 aa7.43□□□□□ -1.22
RNF40-208ENST00000565995 LITAFQ99732 161 aa7.43□□□□□ -1.22
RNF40-208ENST00000565995 SPANXDQ9BXN6 97 aa7.43□□□□□ -1.22
RNF40-208ENST00000565995 SND1-IT1Q9HBX3 110 aa7.43□□□□□ -1.22
RNF40-208ENST00000565995 SPANXCQ9NY87 97 aa7.43□□□□□ -1.22
RNF40-208ENST00000565995 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
RNF40-208ENST00000565995 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
RNF40-208ENST00000565995 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
RNF40-208ENST00000565995 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
RNF40-208ENST00000565995 SPANXB1Q9NS25 103 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms