RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 Q8N814 137 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 SMIM1B2RUZ4 78 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 S100A6P06703 90 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 TSPEAR-AS2P59090 65 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 Q6ZRU5 148 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 Q6ZVQ6 151 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 LINC00469Q8N7U9 141 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 OR10D4PQ8NGN7 298 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 RMI2Q96E14 147 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 CHAC1Q9BUX1 264 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 TTTY13Q9BZ97 58 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
UBFD1-204ENST00000565634 IGKV2D-26A0A0A0MRZ7 120 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 F8VRH5 84 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 SMAGPQ0VAQ4 97 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 LINC01545Q5VT33 79 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 ORAOV1Q8WV07 137 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 C2orf88Q9BSF0 95 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 MAP1LC3CQ9BXW4 147 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 GEMIN7Q9H840 131 aaKnown RBP3.89□□□□□ -1.79
UBFD1-204ENST00000565634 TOMM7Q9P0U1 55 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
UBFD1-204ENST00000565634 GVQW2A0A096LPI5 108 aaPredicted RBP3.88□□□□□ -1.79
UBFD1-204ENST00000565634 IGHV1-58A0A0C4DH39 117 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 HERVK_113P63121 156 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 SDIM1Q6ZPB5 146 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 LINC00518Q8N0U6 118 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 PACRGQ96M98 296 aaPredicted RBP3.88□□□□□ -1.79
UBFD1-204ENST00000565634 TP73-AS1Q9UF72 201 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
UBFD1-204ENST00000565634 LOC105371267A0A1B0GV96 52 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 LINC01549A6NIU2 74 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 DPM2O94777 84 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 IGKCP01834 107 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 S100A2P29034 98 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 RPL37AP61513 92 aaKnown RBP3.87□□□□□ -1.79
UBFD1-204ENST00000565634 SPAG11BQ08648 103 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 Q6ZSA8 131 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
UBFD1-204ENST00000565634 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 C6orf48Q9UBA6 75 aa3.87□□□□□ -1.79
UBFD1-204ENST00000565634 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
UBFD1-204ENST00000565634 SYCNQ0VAF6 134 aa3.86□□□□□ -1.79
UBFD1-204ENST00000565634 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
UBFD1-204ENST00000565634 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
UBFD1-204ENST00000565634 LINC01561Q8N1V8 128 aa3.86□□□□□ -1.79
UBFD1-204ENST00000565634 C9orf163Q8N9P6 203 aa3.86□□□□□ -1.79
UBFD1-204ENST00000565634 CNBPP62633 177 aaKnown RBP3.85□□□□□ -1.79
UBFD1-204ENST00000565634 PYY3Q5JQD4 70 aa3.85□□□□□ -1.79
UBFD1-204ENST00000565634 PCP2Q8IVA1 136 aa3.85□□□□□ -1.79
UBFD1-204ENST00000565634 Q8NDZ9 215 aa3.85□□□□□ -1.79
UBFD1-204ENST00000565634 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
UBFD1-204ENST00000565634 A0A096LNI7 61 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 A0A1W2PNN7 141 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 FAM168BA1KXE4 195 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 LEPROTO15243 131 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 SEC11AP67812 179 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 ADAMTSL4-AS1Q5T5F5 129 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 Q6ZRP5 223 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 Q8IZM0 81 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 PLEKHB2Q96CS7 222 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 CARD19Q96LW7 228 aa3.84□□□□□ -1.79
UBFD1-204ENST00000565634 IGKV2-24A0A0C4DH68 120 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 H3BRM9 83 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 J3QQQ9 107 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 APOMO95445 188 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 PLNP26678 52 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 PFN2P35080 140 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 PRR3P79522 188 aaKnown RBP3.83□□□□□ -1.8
UBFD1-204ENST00000565634 JOSD1Q15040 202 aaPredicted RBP3.83□□□□□ -1.8
UBFD1-204ENST00000565634 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
UBFD1-204ENST00000565634 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 DAND5Q8N907 189 aa3.83□□□□□ -1.8
UBFD1-204ENST00000565634 E9PLD3 99 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 NDUFA1O15239 70 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 SMIM13P0DJ93 91 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 SEC61GP60059 68 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 CKS1BP61024 79 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 XAGE1AQ9HD64 81 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
UBFD1-204ENST00000565634 A0A087WYN8 130 aa3.81□□□□□ -1.8
UBFD1-204ENST00000565634 AKR1D1P51857 326 aa3.81□□□□□ -1.8
UBFD1-204ENST00000565634 LINC01547P58512 204 aaPredicted RBP3.81□□□□□ -1.8
UBFD1-204ENST00000565634 C14orf144Q96I85 54 aa3.81□□□□□ -1.8
UBFD1-204ENST00000565634 LITAFQ99732 161 aa3.81□□□□□ -1.8
UBFD1-204ENST00000565634 MUC2Q02817 5179 aa3.81□□□□□ -1.8
UBFD1-204ENST00000565634 A0A0J9YXY3 114 aa3.8□□□□□ -1.8
UBFD1-204ENST00000565634 LOC107984640A0A0U1RRK4 108 aa3.8□□□□□ -1.8
UBFD1-204ENST00000565634 NMUP48645 174 aa3.8□□□□□ -1.8
UBFD1-204ENST00000565634 RPL18AQ02543 176 aaKnown RBP3.8□□□□□ -1.8
UBFD1-204ENST00000565634 CIRBPQ14011 172 aaKnown RBP3.8□□□□□ -1.8
UBFD1-204ENST00000565634 SOSTDC1Q6X4U4 206 aa3.8□□□□□ -1.8
UBFD1-204ENST00000565634 ERG28Q9UKR5 140 aa3.8□□□□□ -1.8
UBFD1-204ENST00000565634 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 320.6 ms