RNA–Protein interactions for RNA: ENST00000564105.5

CTU2-204, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 1 (best)

Gene CTU2, Length 1,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-204ENST00000564105 KRTAP10-1P60331 282 aa12.23□□□□□ -0.45
CTU2-204ENST00000564105 NPC2P61916 151 aa12.23□□□□□ -0.45
CTU2-204ENST00000564105 SRSF9Q13242 221 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTU2-204ENST00000564105 C9orf129Q5T035 196 aaKnown RBP12.22□□□□□ -0.45
CTU2-204ENST00000564105 Q6ZVH6 145 aa12.22□□□□□ -0.45
CTU2-204ENST00000564105 LINC00474Q9P2X8 69 aa12.21□□□□□ -0.46
CTU2-204ENST00000564105 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.21□□□□□ -0.46
CTU2-204ENST00000564105 PANO1I0J062 215 aa12.2□□□□□ -0.46
CTU2-204ENST00000564105 HNRNPA3P51991 378 aaKnown RBP12.2□□□□□ -0.46
CTU2-204ENST00000564105 LINC00308Q8TCZ7 52 aa12.2□□□□□ -0.46
CTU2-204ENST00000564105 SOSTDC1Q6X4U4 206 aa12.19□□□□□ -0.46
CTU2-204ENST00000564105 SPACA4Q8TDM5 124 aa12.19□□□□□ -0.46
CTU2-204ENST00000564105 HIST1H4GQ99525 98 aa12.19□□□□□ -0.46
CTU2-204ENST00000564105 LRP1BQ9NZR2 4599 aa12.19□□□□□ -0.46
CTU2-204ENST00000564105 EIF4EBP3O60516 100 aaPredicted RBP12.18□□□□□ -0.46
CTU2-204ENST00000564105 IFITM1P13164 125 aa12.18□□□□□ -0.46
CTU2-204ENST00000564105 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
CTU2-204ENST00000564105 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
CTU2-204ENST00000564105 MUSTN1Q8IVN3 82 aa12.18□□□□□ -0.46
CTU2-204ENST00000564105 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
CTU2-204ENST00000564105 COPS9Q8WXC6 57 aa12.18□□□□□ -0.46
CTU2-204ENST00000564105 ABCA13Q86UQ4 5058 aa12.17□□□□□ -0.46
CTU2-204ENST00000564105 FAM30AQ9NZY2 134 aa12.17□□□□□ -0.46
CTU2-204ENST00000564105 HSPG2P98160 4391 aa12.16□□□□□ -0.46
CTU2-204ENST00000564105 FAM168BA1KXE4 195 aa12.16□□□□□ -0.46
CTU2-204ENST00000564105 Q6ZSA8 131 aa12.15□□□□□ -0.46
CTU2-204ENST00000564105 TAL2Q16559 108 aa12.14□□□□□ -0.47
CTU2-204ENST00000564105 PLA2G2DQ9UNK4 145 aa12.14□□□□□ -0.47
CTU2-204ENST00000564105 A0A1W2PNN7 141 aa12.13□□□□□ -0.47
CTU2-204ENST00000564105 SERTAD4-AS1Q5TG53 156 aa12.13□□□□□ -0.47
CTU2-204ENST00000564105 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
CTU2-204ENST00000564105 A0A087WYN8 130 aa12.13□□□□□ -0.47
CTU2-204ENST00000564105 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
CTU2-204ENST00000564105 HSD52Q0P140 79 aa12.13□□□□□ -0.47
CTU2-204ENST00000564105 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
CTU2-204ENST00000564105 Q8NDZ9 215 aa12.13□□□□□ -0.47
CTU2-204ENST00000564105 VPREB1P12018 145 aa12.11□□□□□ -0.47
CTU2-204ENST00000564105 KRTAP7-1Q8IUC3 87 aa12.11□□□□□ -0.47
CTU2-204ENST00000564105 CEND1Q8N111 149 aa12.11□□□□□ -0.47
CTU2-204ENST00000564105 NDUFC2O95298 119 aa12.1□□□□□ -0.47
CTU2-204ENST00000564105 DDTP30046 118 aa12.09□□□□□ -0.47
CTU2-204ENST00000564105 CTAG1AP78358 180 aa12.09□□□□□ -0.47
CTU2-204ENST00000564105 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
CTU2-204ENST00000564105 NKAPP1Q8N9T2 125 aa12.09□□□□□ -0.47
CTU2-204ENST00000564105 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
CTU2-204ENST00000564105 PLAC8Q9NZF1 115 aa12.09□□□□□ -0.47
CTU2-204ENST00000564105 IGLV5-37A0A075B6J1 123 aa12.08□□□□□ -0.48
CTU2-204ENST00000564105 A4D1N5 150 aa12.08□□□□□ -0.48
CTU2-204ENST00000564105 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
CTU2-204ENST00000564105 CIRBP-AS1Q8TBR5 109 aa12.08□□□□□ -0.48
CTU2-204ENST00000564105 NCR3O14931 201 aa12.07□□□□□ -0.48
CTU2-204ENST00000564105 C22orf24Q9Y442 160 aa12.07□□□□□ -0.48
CTU2-204ENST00000564105 EPM2AB3EWF7 344 aa12.06□□□□□ -0.48
CTU2-204ENST00000564105 M0QXV9 152 aa12.06□□□□□ -0.48
CTU2-204ENST00000564105 HAMPP81172 84 aa12.06□□□□□ -0.48
CTU2-204ENST00000564105 APOBP04114 4563 aaKnown RBP12.06□□□□□ -0.48
CTU2-204ENST00000564105 FXYD2P54710 66 aa12.05□□□□□ -0.48
CTU2-204ENST00000564105 IGKV2-28A0A075B6P5 120 aa12.04□□□□□ -0.48
CTU2-204ENST00000564105 M0R378 163 aa12.04□□□□□ -0.48
CTU2-204ENST00000564105 IGKV2D-28P01615 120 aa12.04□□□□□ -0.48
CTU2-204ENST00000564105 PHF5AQ7RTV0 110 aaKnown RBP12.04□□□□□ -0.48
CTU2-204ENST00000564105 MRPL55Q7Z7F7 128 aaKnown RBP12.04□□□□□ -0.48
CTU2-204ENST00000564105 TRBV10-2A0A0K0K1G8 114 aa12.03□□□□□ -0.48
CTU2-204ENST00000564105 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
CTU2-204ENST00000564105 A6NJY4 79 aa12.03□□□□□ -0.48
CTU2-204ENST00000564105 HINT1P49773 126 aaPredicted RBP12.02□□□□□ -0.49
CTU2-204ENST00000564105 C7orf33Q8WU49 177 aa12.02□□□□□ -0.49
CTU2-204ENST00000564105 GAGE10A6NGK3 116 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 PCP4L1A6NKN8 68 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 XGP55808 180 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 LINC00167Q96N53 147 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 M0R143 59 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 CDK2AP2O75956 126 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 LBHQ53QV2 105 aaPredicted RBP12.01□□□□□ -0.49
CTU2-204ENST00000564105 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
CTU2-204ENST00000564105 CFC1BP0CG36 223 aa11.99□□□□□ -0.49
CTU2-204ENST00000564105 CFC1P0CG37 223 aa11.99□□□□□ -0.49
CTU2-204ENST00000564105 S100A7L2Q5SY68 101 aa11.99□□□□□ -0.49
CTU2-204ENST00000564105 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
CTU2-204ENST00000564105 RPL37AP8A6NKH3 93 aa11.97□□□□□ -0.49
CTU2-204ENST00000564105 UBE2BP63146 152 aa11.97□□□□□ -0.49
CTU2-204ENST00000564105 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
CTU2-204ENST00000564105 TRAV13-2A0A0B4J235 113 aa11.96□□□□□ -0.49
CTU2-204ENST00000564105 TRBV10-3A0A0K0K1G6 114 aa11.96□□□□□ -0.49
CTU2-204ENST00000564105 A6NDN8 102 aa11.96□□□□□ -0.49
CTU2-204ENST00000564105 RAB37Q96AX2 223 aa11.96□□□□□ -0.49
CTU2-204ENST00000564105 A0A0B4J2C4 111 aa11.96□□□□□ -0.5
CTU2-204ENST00000564105 TMEM126AQ9H061 195 aa11.96□□□□□ -0.5
CTU2-204ENST00000564105 IGLV1-50A0A075B6I6 118 aa11.95□□□□□ -0.5
CTU2-204ENST00000564105 IGLV6-57P01721 117 aa11.95□□□□□ -0.5
CTU2-204ENST00000564105 KRTAP11-1Q8IUC1 163 aa11.93□□□□□ -0.5
CTU2-204ENST00000564105 BATFQ16520 125 aa11.92□□□□□ -0.5
CTU2-204ENST00000564105 RPL13AP40429 203 aaKnown RBP11.92□□□□□ -0.5
CTU2-204ENST00000564105 A0A1B0GWB2 263 aa11.91□□□□□ -0.5
CTU2-204ENST00000564105 K7ERJ3 54 aa11.91□□□□□ -0.5
CTU2-204ENST00000564105 PRO1854Q9UHT4 67 aa11.91□□□□□ -0.5
CTU2-204ENST00000564105 KCNQ1DNQ9H478 68 aa11.9□□□□□ -0.5
CTU2-204ENST00000564105 TRAV23DV6A0A075B6W5 121 aa11.89□□□□□ -0.51
CTU2-204ENST00000564105 PRYO14603 147 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms