RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CLLU1Q5K131 121 aa7.45□□□□□ -1.22
SF3B3-202ENST00000562722 TMEM170BQ5T4T1 132 aa7.45□□□□□ -1.22
SF3B3-202ENST00000562722 SPAG11AQ6PDA7 123 aa7.45□□□□□ -1.22
SF3B3-202ENST00000562722 Q8NDZ9 215 aa7.45□□□□□ -1.22
SF3B3-202ENST00000562722 LINC00158P58513 81 aa7.44□□□□□ -1.22
SF3B3-202ENST00000562722 SFTA2Q6UW10 78 aa7.44□□□□□ -1.22
SF3B3-202ENST00000562722 UQCC3Q6UW78 93 aa7.44□□□□□ -1.22
SF3B3-202ENST00000562722 ZNF706Q9Y5V0 76 aaPredicted RBP7.44□□□□□ -1.22
SF3B3-202ENST00000562722 A0A0U1RRA0 63 aa7.43□□□□□ -1.22
SF3B3-202ENST00000562722 HBDP02042 147 aa7.43□□□□□ -1.22
SF3B3-202ENST00000562722 PMCHL1Q16048 86 aa7.43□□□□□ -1.22
SF3B3-202ENST00000562722 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
SF3B3-202ENST00000562722 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
SF3B3-202ENST00000562722 A0A096LNJ9 63 aa7.42□□□□□ -1.22
SF3B3-202ENST00000562722 C11orf86A6NJI1 115 aa7.42□□□□□ -1.22
SF3B3-202ENST00000562722 BAGE3Q86Y29 109 aa7.42□□□□□ -1.22
SF3B3-202ENST00000562722 SEC11CQ9BY50 192 aa7.42□□□□□ -1.22
SF3B3-202ENST00000562722 ATP6V1G1O75348 118 aa7.41□□□□□ -1.22
SF3B3-202ENST00000562722 LINC00614P0C842 121 aa7.41□□□□□ -1.22
SF3B3-202ENST00000562722 FP248Q71RG6 208 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-202ENST00000562722 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
SF3B3-202ENST00000562722 A6NJY4 79 aa7.4□□□□□ -1.22
SF3B3-202ENST00000562722 DAND5Q8N907 189 aa7.4□□□□□ -1.22
SF3B3-202ENST00000562722 Q8NBF4 154 aa7.4□□□□□ -1.22
SF3B3-202ENST00000562722 C18orf32Q8TCD1 76 aa7.39□□□□□ -1.23
SF3B3-202ENST00000562722 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
SF3B3-202ENST00000562722 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
SF3B3-202ENST00000562722 TRAPPC1Q9Y5R8 145 aa7.39□□□□□ -1.23
SF3B3-202ENST00000562722 NCR3O14931 201 aa7.38□□□□□ -1.23
SF3B3-202ENST00000562722 MEIG1Q5JSS6 88 aa7.38□□□□□ -1.23
SF3B3-202ENST00000562722 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
SF3B3-202ENST00000562722 URB1-AS1Q96HZ7 61 aa7.38□□□□□ -1.23
SF3B3-202ENST00000562722 ETDCA0A1B0GVM5 59 aa7.37□□□□□ -1.23
SF3B3-202ENST00000562722 PRYO14603 147 aa7.37□□□□□ -1.23
SF3B3-202ENST00000562722 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
SF3B3-202ENST00000562722 RHEBQ15382 184 aa7.36□□□□□ -1.23
SF3B3-202ENST00000562722 SMCR5Q8TEV8 140 aa7.36□□□□□ -1.23
SF3B3-202ENST00000562722 S100A12P80511 92 aa7.35□□□□□ -1.23
SF3B3-202ENST00000562722 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
SF3B3-202ENST00000562722 COMMD7Q86VX2 200 aa7.35□□□□□ -1.23
SF3B3-202ENST00000562722 TMEM223A0PJW6 202 aa7.34□□□□□ -1.23
SF3B3-202ENST00000562722 SPINK1P00995 79 aa7.34□□□□□ -1.23
SF3B3-202ENST00000562722 LINC01547P58512 204 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-202ENST00000562722 GAGE2AQ6NT46 116 aa7.34□□□□□ -1.23
SF3B3-202ENST00000562722 MIR7-3HGQ8N6C7 128 aa7.34□□□□□ -1.23
SF3B3-202ENST00000562722 NDUFA12Q9UI09 145 aa7.34□□□□□ -1.23
SF3B3-202ENST00000562722 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
SF3B3-202ENST00000562722 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
SF3B3-202ENST00000562722 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
SF3B3-202ENST00000562722 TRBV10-3A0A0K0K1G6 114 aa7.32□□□□□ -1.24
SF3B3-202ENST00000562722 SPRR1AP35321 89 aa7.32□□□□□ -1.24
SF3B3-202ENST00000562722 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
SF3B3-202ENST00000562722 MOBPQ13875 183 aa7.32□□□□□ -1.24
SF3B3-202ENST00000562722 HERV-K104P63124 156 aa7.31□□□□□ -1.24
SF3B3-202ENST00000562722 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 IFITM2Q01629 132 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 C10orf91Q5T1B1 145 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 FAM19A2Q8N3H0 131 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 IFI27L1Q96BM0 104 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
SF3B3-202ENST00000562722 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
SF3B3-202ENST00000562722 KRTAP4-16G5E9R7 235 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-202ENST00000562722 H0Y8G0 127 aa7.28□□□□□ -1.24
SF3B3-202ENST00000562722 B5MCH6 92 aa7.27□□□□□ -1.25
SF3B3-202ENST00000562722 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
SF3B3-202ENST00000562722 DDTP30046 118 aa7.27□□□□□ -1.25
SF3B3-202ENST00000562722 CHCHD1Q96BP2 118 aaKnown RBP7.27□□□□□ -1.25
SF3B3-202ENST00000562722 SLC25A20O43772 301 aa7.26□□□□□ -1.25
SF3B3-202ENST00000562722 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
SF3B3-202ENST00000562722 Q8N377 158 aa7.26□□□□□ -1.25
SF3B3-202ENST00000562722 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
SF3B3-202ENST00000562722 APOC3P02656 99 aa7.25□□□□□ -1.25
SF3B3-202ENST00000562722 RPS29P62273 56 aaKnown RBP7.25□□□□□ -1.25
SF3B3-202ENST00000562722 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
SF3B3-202ENST00000562722 MIEN1Q9BRT3 115 aa7.25□□□□□ -1.25
SF3B3-202ENST00000562722 HSBP1O75506 76 aa7.24□□□□□ -1.25
SF3B3-202ENST00000562722 S100A7L2Q5SY68 101 aa7.24□□□□□ -1.25
SF3B3-202ENST00000562722 TRBV10-2A0A0K0K1G8 114 aa7.23□□□□□ -1.25
SF3B3-202ENST00000562722 NDUFA5Q16718 116 aa7.23□□□□□ -1.25
SF3B3-202ENST00000562722 Q6ZRX8 168 aa7.23□□□□□ -1.25
SF3B3-202ENST00000562722 Q9BRP9 147 aa7.23□□□□□ -1.25
SF3B3-202ENST00000562722 SPANXB1Q9NS25 103 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-202ENST00000562722 SNAPINO95295 136 aa7.22□□□□□ -1.25
SF3B3-202ENST00000562722 TSPEAR-AS2P59090 65 aa7.22□□□□□ -1.25
SF3B3-202ENST00000562722 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
SF3B3-202ENST00000562722 LEPROTO15243 131 aa7.21□□□□□ -1.26
SF3B3-202ENST00000562722 JOSD1Q15040 202 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-202ENST00000562722 SVBPQ8N300 66 aa7.21□□□□□ -1.26
SF3B3-202ENST00000562722 TRAV23DV6A0A075B6W5 121 aa7.2□□□□□ -1.26
SF3B3-202ENST00000562722 XP32Q5T750 250 aa7.2□□□□□ -1.26
SF3B3-202ENST00000562722 LOC107984156A0A0G2JMH3 177 aa7.19□□□□□ -1.26
SF3B3-202ENST00000562722 J3QQQ9 107 aa7.19□□□□□ -1.26
SF3B3-202ENST00000562722 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
SF3B3-202ENST00000562722 PLNP26678 52 aa7.19□□□□□ -1.26
SF3B3-202ENST00000562722 HERVK_113P61574 105 aa7.19□□□□□ -1.26
SF3B3-202ENST00000562722 ARL17AQ8IVW1 177 aa7.19□□□□□ -1.26
SF3B3-202ENST00000562722 LEPROTL1O95214 131 aa7.18□□□□□ -1.26
SF3B3-202ENST00000562722 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms