RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 PHLDA3Q9Y5J5 127 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 FREM3P0C091 2139 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 PCDH15Q96QU1 1955 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 SONP18583 2426 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 CMYA5Q8N3K9 4069 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 SNRNP200O75643 2136 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 HEATR1Q9H583 2144 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 CPAMD8Q8IZJ3 1885 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 SPAG17Q6Q759 2223 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 EML5Q05BV3 1969 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TRBV7-1A0A0A6YYK4 115 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 IGKV3D-7A0A0C4DH55 119 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 A0A0J9YY99 117 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TRBV30A0A0K0K1B3 111 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TRBV6-1A0A0K0K1D8 114 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TMEM30CPA0ZSE6 113 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 LINC01546A6NGU7 62 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 C17orf98A8MV24 154 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 IQCF6A8MYZ5 107 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 M0R3E3 92 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 LST1O00453 97 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 CCL16O15467 120 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 DNAL4O96015 105 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 IGHV3-30P01768 117 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 IGHV3-33P01772 117 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TCRAP04437 139 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 CTSGP08311 255 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 IGHV3-30-5P0DP03 117 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 CD52P31358 61 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 LINC00313P59037 77 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 HIST1H4AP62805 103 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 ERHP84090 104 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 RBM3P98179 157 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 PLGLAQ15195 96 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 C10orf128Q5T292 105 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 Q6JHZ5 121 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 LYZL1Q6UWQ5 148 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 LINC00322Q6ZN03 302 aaPredicted RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 SDIM1Q6ZPB5 146 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 Q86TA4 180 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 C1orf158Q8N1D5 194 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TMEM263Q8WUH6 116 aaKnown RBP0.91□□□□□ -2.26
USP8-216ENST00000561206 FAM167A-AS1Q96KT0 104 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 ZNF714Q96N38 554 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 SCGB3A1Q96QR1 104 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 UPK3BQ9BT76 320 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 PTPRSQ13332 1948 aa0.91□□□□□ -2.26
USP8-216ENST00000561206 TANC2Q9HCD6 1990 aa0.9□□□□□ -2.26
USP8-216ENST00000561206 SCN10AQ9Y5Y9 1956 aa0.9□□□□□ -2.26
USP8-216ENST00000561206 FAT3Q8TDW7 4589 aa0.9□□□□□ -2.26
USP8-216ENST00000561206 USH2AO75445 5202 aa0.9□□□□□ -2.26
USP8-216ENST00000561206 ALPK2Q86TB3 2170 aa0.9□□□□□ -2.26
USP8-216ENST00000561206 MED13Q9UHV7 2174 aa0.9□□□□□ -2.26
USP8-216ENST00000561206 SPTBN1Q01082 2364 aaKnown RBP0.9□□□□□ -2.27
USP8-216ENST00000561206 KIAA1549LQ6ZVL6 1849 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TRBV19A0A075B6N1 114 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 IGHV3-73A0A0B4J1V6 119 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TRAV3A0A0B4J244 114 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 IGHV1-58A0A0C4DH39 117 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TRBV7-6A0A0J9YX20 115 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 FAM223BA6NKX1 122 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 A8MWP4 228 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 COX7A2LO14548 114 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 LEPROTO15243 131 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 NDUFB3O43676 98 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 NDUFC1O43677 76 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 BCE1O60756 84 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TIMM17BO60830 172 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 IGHV3-53P01767 116 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 CLPSP04118 112 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 IGKV1-16P04430 117 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 CGB3P0DN86 165 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 CGB7P0DN87 165 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 COX6B1P14854 86 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 ZNF22P17026 224 aaPredicted RBP0.9□□□□□ -2.27
USP8-216ENST00000561206 XCL1P47992 114 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TSPEAR-AS2P59090 65 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 SNRPD3P62318 126 aaKnown RBP0.9□□□□□ -2.27
USP8-216ENST00000561206 PRCDQ00LT1 54 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 RHOHQ15669 191 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 FAM27BQ5VT28 67 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 ATP5EP2Q5VTU8 51 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 PRR15Q8IV56 129 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 MUSTN1Q8IVN3 82 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 FAM223AQ8IWN6 122 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 Q8IYB0 196 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 DYNAPQ8N1N2 210 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 C20orf197Q8N268 126 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 FAM216BQ8N7L0 139 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 SMCR5Q8TEV8 140 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 SLC50A1Q9BRV3 221 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TIMM21Q9BVV7 248 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 C11orf68Q9H3H3 251 aaKnown RBP0.9□□□□□ -2.27
USP8-216ENST00000561206 C16orf95Q9H693 158 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 PROK2Q9HC23 129 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 TMEM14CQ9P0S9 112 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 MYO7AQ13402 2215 aa0.9□□□□□ -2.27
USP8-216ENST00000561206 PTPRBP23467 1997 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms