RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 KRTDAPP60985 99 aa5.3□□□□□ -1.56
USP3-217ENST00000560070 PRR3P79522 188 aaKnown RBP5.3□□□□□ -1.56
USP3-217ENST00000560070 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
USP3-217ENST00000560070 PSORS1C2Q9UIG4 136 aa5.3□□□□□ -1.56
USP3-217ENST00000560070 LEPROTO15243 131 aa5.29□□□□□ -1.56
USP3-217ENST00000560070 SMIM13P0DJ93 91 aa5.29□□□□□ -1.56
USP3-217ENST00000560070 PLNP26678 52 aa5.29□□□□□ -1.56
USP3-217ENST00000560070 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
USP3-217ENST00000560070 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
USP3-217ENST00000560070 C3orf79P0CE67 100 aa5.28□□□□□ -1.56
USP3-217ENST00000560070 TSPEAR-AS2P59090 65 aa5.28□□□□□ -1.56
USP3-217ENST00000560070 LBHQ53QV2 105 aaPredicted RBP5.28□□□□□ -1.56
USP3-217ENST00000560070 SND1-IT1Q9HBX3 110 aa5.28□□□□□ -1.56
USP3-217ENST00000560070 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
USP3-217ENST00000560070 MYMXA0A1B0GTQ4 84 aa5.27□□□□□ -1.57
USP3-217ENST00000560070 HERVK_113P61574 105 aa5.27□□□□□ -1.57
USP3-217ENST00000560070 COA6Q5JTJ3 125 aaKnown RBP5.27□□□□□ -1.57
USP3-217ENST00000560070 PET117Q6UWS5 81 aa5.27□□□□□ -1.57
USP3-217ENST00000560070 PLEKHB2Q96CS7 222 aa5.27□□□□□ -1.57
USP3-217ENST00000560070 LINC00167Q96N53 147 aa5.27□□□□□ -1.57
USP3-217ENST00000560070 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
USP3-217ENST00000560070 SRRM2Q9UQ35 2752 aaKnown RBP5.27□□□□□ -1.57
USP3-217ENST00000560070 J3QQQ9 107 aa5.26□□□□□ -1.57
USP3-217ENST00000560070 LGALS3P17931 250 aaKnown RBP5.26□□□□□ -1.57
USP3-217ENST00000560070 MRPL55Q7Z7F7 128 aaKnown RBP5.26□□□□□ -1.57
USP3-217ENST00000560070 ATOH7Q8N100 152 aa5.26□□□□□ -1.57
USP3-217ENST00000560070 NKAPP1Q8N9T2 125 aa5.26□□□□□ -1.57
USP3-217ENST00000560070 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
USP3-217ENST00000560070 IGLV7-43P04211 117 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 S100A6P06703 90 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 HERV-K104P63124 156 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
USP3-217ENST00000560070 COX17Q14061 63 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 SFTA2Q6UW10 78 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 DAND5Q8N907 189 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 Q8NDZ9 215 aa5.25□□□□□ -1.57
USP3-217ENST00000560070 IGKV2-28A0A075B6P5 120 aa5.24□□□□□ -1.57
USP3-217ENST00000560070 OXTP01178 125 aa5.24□□□□□ -1.57
USP3-217ENST00000560070 IGKV2D-28P01615 120 aa5.24□□□□□ -1.57
USP3-217ENST00000560070 S100A2P29034 98 aa5.24□□□□□ -1.57
USP3-217ENST00000560070 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
USP3-217ENST00000560070 SPINK6Q6UWN8 80 aa5.24□□□□□ -1.57
USP3-217ENST00000560070 PLA2G2DQ9UNK4 145 aa5.24□□□□□ -1.57
USP3-217ENST00000560070 E9PLD3 99 aa5.23□□□□□ -1.57
USP3-217ENST00000560070 VPREB1P12018 145 aa5.23□□□□□ -1.57
USP3-217ENST00000560070 NPC2P61916 151 aa5.23□□□□□ -1.57
USP3-217ENST00000560070 SNRPEP62304 92 aaKnown RBP5.23□□□□□ -1.57
USP3-217ENST00000560070 BOD1L2Q8IYS8 172 aa5.23□□□□□ -1.57
USP3-217ENST00000560070 HIST3H2BBQ8N257 126 aa5.23□□□□□ -1.57
USP3-217ENST00000560070 TTTY13Q9BZ97 58 aa5.23□□□□□ -1.57
USP3-217ENST00000560070 IGLV5-37A0A075B6J1 123 aa5.22□□□□□ -1.57
USP3-217ENST00000560070 C20orf202A1L168 122 aa5.22□□□□□ -1.57
USP3-217ENST00000560070 LINC00587B1AMM8 73 aa5.22□□□□□ -1.57
USP3-217ENST00000560070 HIST1H2BLQ99880 126 aa5.22□□□□□ -1.57
USP3-217ENST00000560070 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
USP3-217ENST00000560070 IGKV2D-26A0A0A0MRZ7 120 aa5.21□□□□□ -1.58
USP3-217ENST00000560070 NCR3O14931 201 aa5.21□□□□□ -1.58
USP3-217ENST00000560070 NMUP48645 174 aa5.21□□□□□ -1.58
USP3-217ENST00000560070 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
USP3-217ENST00000560070 REG3GQ6UW15 175 aa5.21□□□□□ -1.58
USP3-217ENST00000560070 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.58
USP3-217ENST00000560070 IGLV1-50A0A075B6I6 118 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 A0A0J9YXY3 114 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 TMEM238C9JI98 176 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 M0R378 163 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 BCE1O60756 84 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 ANKRD39Q53RE8 183 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
USP3-217ENST00000560070 ZNF815PA8K554 130 aa5.19□□□□□ -1.58
USP3-217ENST00000560070 ZNF861PO60384 105 aa5.19□□□□□ -1.58
USP3-217ENST00000560070 UBE2AP49459 152 aa5.19□□□□□ -1.58
USP3-217ENST00000560070 H0Y9J4 135 aa5.18□□□□□ -1.58
USP3-217ENST00000560070 EIF4EBP3O60516 100 aaPredicted RBP5.18□□□□□ -1.58
USP3-217ENST00000560070 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
USP3-217ENST00000560070 LINC01600Q96MT4 127 aa5.18□□□□□ -1.58
USP3-217ENST00000560070 C5orf52A6NGY3 159 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 SCGB1D1O95968 90 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
USP3-217ENST00000560070 SOSTDC1Q6X4U4 206 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 FAM19A1Q7Z5A9 133 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 MIEN1Q9BRT3 115 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 TMEM126AQ9H061 195 aa5.17□□□□□ -1.58
USP3-217ENST00000560070 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
USP3-217ENST00000560070 PRLHP81277 87 aa5.16□□□□□ -1.58
USP3-217ENST00000560070 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
USP3-217ENST00000560070 SCGB1D4Q6XE38 83 aa5.16□□□□□ -1.58
USP3-217ENST00000560070 PCP2Q8IVA1 136 aa5.16□□□□□ -1.58
USP3-217ENST00000560070 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
USP3-217ENST00000560070 TRBV10-3A0A0K0K1G6 114 aa5.15□□□□□ -1.59
USP3-217ENST00000560070 KRTAP10-8P60410 259 aa5.15□□□□□ -1.59
USP3-217ENST00000560070 LINC00308Q8TCZ7 52 aa5.15□□□□□ -1.59
USP3-217ENST00000560070 LITAFQ99732 161 aa5.15□□□□□ -1.59
USP3-217ENST00000560070 LOC107984156A0A0G2JMH3 177 aa5.14□□□□□ -1.59
USP3-217ENST00000560070 HSBP1L1C9JCN9 74 aa5.14□□□□□ -1.59
USP3-217ENST00000560070 DDTP30046 118 aa5.14□□□□□ -1.59
USP3-217ENST00000560070 S100A7L2Q5SY68 101 aa5.14□□□□□ -1.59
USP3-217ENST00000560070 ARL17AQ8IVW1 177 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms