RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GAGE2DQ9UEU5 116 aa7.85□□□□□ -1.15
HERC1-205ENST00000559886 XAGE1AQ9HD64 81 aa7.85□□□□□ -1.15
HERC1-205ENST00000559886 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
HERC1-205ENST00000559886 A6NDN8 102 aa7.83□□□□□ -1.16
HERC1-205ENST00000559886 CFC1BP0CG36 223 aa7.83□□□□□ -1.16
HERC1-205ENST00000559886 CFC1P0CG37 223 aa7.83□□□□□ -1.16
HERC1-205ENST00000559886 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
HERC1-205ENST00000559886 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
HERC1-205ENST00000559886 A0A1B0GWB2 263 aa7.82□□□□□ -1.16
HERC1-205ENST00000559886 FUSP35637 526 aaKnown RBP eCLIP7.82□□□□□ -1.16
HERC1-205ENST00000559886 GAGE2BQ13066 116 aa7.82□□□□□ -1.16
HERC1-205ENST00000559886 LINC01620Q4KN68 170 aa7.82□□□□□ -1.16
HERC1-205ENST00000559886 SDIM1Q6ZPB5 146 aa7.82□□□□□ -1.16
HERC1-205ENST00000559886 LINC00336Q6ZUF6 198 aa7.82□□□□□ -1.16
HERC1-205ENST00000559886 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
HERC1-205ENST00000559886 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
HERC1-205ENST00000559886 NDUFC2O95298 119 aa7.81□□□□□ -1.16
HERC1-205ENST00000559886 Q8NDZ9 215 aa7.81□□□□□ -1.16
HERC1-205ENST00000559886 PKD1P98161 4303 aa7.81□□□□□ -1.16
HERC1-205ENST00000559886 A0A096LNI7 61 aa7.81□□□□□ -1.16
HERC1-205ENST00000559886 IGLV5-52A0A0A0MRZ9 124 aa7.81□□□□□ -1.16
HERC1-205ENST00000559886 A0A0B4J2C4 111 aa7.8□□□□□ -1.16
HERC1-205ENST00000559886 KRTAP10-2P60368 255 aa7.8□□□□□ -1.16
HERC1-205ENST00000559886 IGKV2-28A0A075B6P5 120 aa7.79□□□□□ -1.16
HERC1-205ENST00000559886 K7ERJ3 54 aa7.79□□□□□ -1.16
HERC1-205ENST00000559886 IGKV2D-28P01615 120 aa7.79□□□□□ -1.16
HERC1-205ENST00000559886 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
HERC1-205ENST00000559886 VPREB1P12018 145 aa7.78□□□□□ -1.16
HERC1-205ENST00000559886 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
HERC1-205ENST00000559886 COL5A1-AS1Q5SY13 56 aa7.78□□□□□ -1.16
HERC1-205ENST00000559886 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
HERC1-205ENST00000559886 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
HERC1-205ENST00000559886 RAB37Q96AX2 223 aa7.78□□□□□ -1.16
HERC1-205ENST00000559886 DNAH5Q8TE73 4624 aa7.78□□□□□ -1.16
HERC1-205ENST00000559886 LINC00337Q8N6G1 96 aa7.77□□□□□ -1.17
HERC1-205ENST00000559886 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
HERC1-205ENST00000559886 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
HERC1-205ENST00000559886 LBHQ53QV2 105 aaPredicted RBP7.76□□□□□ -1.17
HERC1-205ENST00000559886 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
HERC1-205ENST00000559886 LINC00474Q9P2X8 69 aa7.76□□□□□ -1.17
HERC1-205ENST00000559886 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
HERC1-205ENST00000559886 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
HERC1-205ENST00000559886 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
HERC1-205ENST00000559886 KRTAP7-1Q8IUC3 87 aa7.76□□□□□ -1.17
HERC1-205ENST00000559886 NCR3O14931 201 aa7.75□□□□□ -1.17
HERC1-205ENST00000559886 IGLV5-37A0A075B6J1 123 aa7.75□□□□□ -1.17
HERC1-205ENST00000559886 PANO1I0J062 215 aa7.74□□□□□ -1.17
HERC1-205ENST00000559886 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
HERC1-205ENST00000559886 RPL13AP40429 203 aaKnown RBP7.74□□□□□ -1.17
HERC1-205ENST00000559886 SPACA4Q8TDM5 124 aa7.74□□□□□ -1.17
HERC1-205ENST00000559886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
HERC1-205ENST00000559886 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
HERC1-205ENST00000559886 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
HERC1-205ENST00000559886 M0R378 163 aa7.73□□□□□ -1.17
HERC1-205ENST00000559886 RYR3Q15413 4870 aa7.73□□□□□ -1.17
HERC1-205ENST00000559886 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
HERC1-205ENST00000559886 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
HERC1-205ENST00000559886 OR13C6PQ8NH95 151 aa7.73□□□□□ -1.17
HERC1-205ENST00000559886 TMEM126AQ9H061 195 aa7.72□□□□□ -1.17
HERC1-205ENST00000559886 H7C2G1 150 aa7.72□□□□□ -1.17
HERC1-205ENST00000559886 TSPAN13O95857 204 aa7.72□□□□□ -1.17
HERC1-205ENST00000559886 IGLV6-57P01721 117 aa7.72□□□□□ -1.17
HERC1-205ENST00000559886 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
HERC1-205ENST00000559886 PKHD1P08F94 4074 aa7.71□□□□□ -1.17
HERC1-205ENST00000559886 S100A7L2Q5SY68 101 aa7.71□□□□□ -1.17
HERC1-205ENST00000559886 C9orf118A6NHY6 69 aa7.71□□□□□ -1.18
HERC1-205ENST00000559886 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
HERC1-205ENST00000559886 EPM2AB3EWF7 344 aa7.7□□□□□ -1.18
HERC1-205ENST00000559886 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
HERC1-205ENST00000559886 DPH3Q96FX2 82 aa7.7□□□□□ -1.18
HERC1-205ENST00000559886 DNAH8Q96JB1 4490 aa7.7□□□□□ -1.18
HERC1-205ENST00000559886 KRTAP10-1P60331 282 aa7.7□□□□□ -1.18
HERC1-205ENST00000559886 MRPL55Q7Z7F7 128 aaKnown RBP7.7□□□□□ -1.18
HERC1-205ENST00000559886 M0QXV9 152 aa7.69□□□□□ -1.18
HERC1-205ENST00000559886 Q1RN00 199 aa7.69□□□□□ -1.18
HERC1-205ENST00000559886 NAA38Q9BRA0 125 aaKnown RBP7.69□□□□□ -1.18
HERC1-205ENST00000559886 A0A087WYN8 130 aa7.69□□□□□ -1.18
HERC1-205ENST00000559886 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
HERC1-205ENST00000559886 SMIM11BQ8TCY0 68 aa7.69□□□□□ -1.18
HERC1-205ENST00000559886 H3BUT2 72 aa7.68□□□□□ -1.18
HERC1-205ENST00000559886 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
HERC1-205ENST00000559886 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
HERC1-205ENST00000559886 Q6ZSA8 131 aa7.68□□□□□ -1.18
HERC1-205ENST00000559886 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
HERC1-205ENST00000559886 FAM30AQ9NZY2 134 aa7.67□□□□□ -1.18
HERC1-205ENST00000559886 IGLV1-50A0A075B6I6 118 aa7.67□□□□□ -1.18
HERC1-205ENST00000559886 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
HERC1-205ENST00000559886 TRIAP1O43715 76 aa7.66□□□□□ -1.18
HERC1-205ENST00000559886 PSMB2P49721 201 aa7.66□□□□□ -1.18
HERC1-205ENST00000559886 PHF5AQ7RTV0 110 aaKnown RBP7.66□□□□□ -1.18
HERC1-205ENST00000559886 KCNQ1DNQ9H478 68 aa7.66□□□□□ -1.18
HERC1-205ENST00000559886 TRAV23DV6A0A075B6W5 121 aa7.65□□□□□ -1.18
HERC1-205ENST00000559886 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
HERC1-205ENST00000559886 A0A1W2PPM0 123 aa7.64□□□□□ -1.19
HERC1-205ENST00000559886 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
HERC1-205ENST00000559886 PRYO14603 147 aa7.62□□□□□ -1.19
HERC1-205ENST00000559886 ZNF73O43830 326 aaPredicted RBP7.62□□□□□ -1.19
HERC1-205ENST00000559886 COX6CP09669 75 aa7.62□□□□□ -1.19
HERC1-205ENST00000559886 C6orf99Q4VX62 202 aa7.62□□□□□ -1.19
HERC1-205ENST00000559886 SCGB1C2P0DMR2 95 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms