RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
SPG11-219ENST00000559822 APOC3P02656 99 aa7.18□□□□□ -1.26
SPG11-219ENST00000559822 CTAG1AP78358 180 aa7.18□□□□□ -1.26
SPG11-219ENST00000559822 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
SPG11-219ENST00000559822 SVBPQ8N300 66 aa7.18□□□□□ -1.26
SPG11-219ENST00000559822 LINC00158P58513 81 aa7.17□□□□□ -1.26
SPG11-219ENST00000559822 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
SPG11-219ENST00000559822 TRAV12-1A0A0B4J245 112 aa7.16□□□□□ -1.26
SPG11-219ENST00000559822 M0R378 163 aa7.16□□□□□ -1.26
SPG11-219ENST00000559822 ATP6V1G1O75348 118 aa7.16□□□□□ -1.26
SPG11-219ENST00000559822 CBLN2Q8IUK8 224 aa7.16□□□□□ -1.26
SPG11-219ENST00000559822 IFI27L1Q96BM0 104 aa7.15□□□□□ -1.26
SPG11-219ENST00000559822 TMEM223A0PJW6 202 aa7.14□□□□□ -1.27
SPG11-219ENST00000559822 LINC00587B1AMM8 73 aa7.14□□□□□ -1.27
SPG11-219ENST00000559822 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
SPG11-219ENST00000559822 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
SPG11-219ENST00000559822 HERV-K104P63124 156 aa7.13□□□□□ -1.27
SPG11-219ENST00000559822 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
SPG11-219ENST00000559822 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
SPG11-219ENST00000559822 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
SPG11-219ENST00000559822 PRYO14603 147 aa7.12□□□□□ -1.27
SPG11-219ENST00000559822 Q8NDZ9 215 aa7.12□□□□□ -1.27
SPG11-219ENST00000559822 HSBP1O75506 76 aa7.11□□□□□ -1.27
SPG11-219ENST00000559822 SMIM13P0DJ93 91 aa7.11□□□□□ -1.27
SPG11-219ENST00000559822 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
SPG11-219ENST00000559822 BOD1L2Q8IYS8 172 aa7.11□□□□□ -1.27
SPG11-219ENST00000559822 RETNLBQ9BQ08 111 aa7.11□□□□□ -1.27
SPG11-219ENST00000559822 MAP1LC3CQ9BXW4 147 aa7.11□□□□□ -1.27
SPG11-219ENST00000559822 S100A12P80511 92 aa7.1□□□□□ -1.27
SPG11-219ENST00000559822 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
SPG11-219ENST00000559822 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
SPG11-219ENST00000559822 CDIP1Q9H305 208 aa7.1□□□□□ -1.27
SPG11-219ENST00000559822 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
SPG11-219ENST00000559822 MYMXA0A1B0GTQ4 84 aa7.09□□□□□ -1.27
SPG11-219ENST00000559822 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.27
SPG11-219ENST00000559822 LINC00337Q8N6G1 96 aa7.09□□□□□ -1.27
SPG11-219ENST00000559822 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
SPG11-219ENST00000559822 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
SPG11-219ENST00000559822 C3orf22Q8N5N4 141 aa7.08□□□□□ -1.28
SPG11-219ENST00000559822 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
SPG11-219ENST00000559822 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
SPG11-219ENST00000559822 NCR3O14931 201 aa7.07□□□□□ -1.28
SPG11-219ENST00000559822 KCNQ1DNQ9H478 68 aa7.07□□□□□ -1.28
SPG11-219ENST00000559822 SPRR1AP35321 89 aa7.06□□□□□ -1.28
SPG11-219ENST00000559822 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
SPG11-219ENST00000559822 H0Y8G0 127 aa7.05□□□□□ -1.28
SPG11-219ENST00000559822 LEPROTL1O95214 131 aa7.05□□□□□ -1.28
SPG11-219ENST00000559822 PLNP26678 52 aa7.05□□□□□ -1.28
SPG11-219ENST00000559822 TRBV10-3A0A0K0K1G6 114 aa7.04□□□□□ -1.28
SPG11-219ENST00000559822 HERVK_113P61574 105 aa7.04□□□□□ -1.28
SPG11-219ENST00000559822 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
SPG11-219ENST00000559822 SMCR5Q8TEV8 140 aa7.04□□□□□ -1.28
SPG11-219ENST00000559822 MIEN1Q9BRT3 115 aa7.04□□□□□ -1.28
SPG11-219ENST00000559822 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
SPG11-219ENST00000559822 MUC2Q02817 5179 aa7.03□□□□□ -1.28
SPG11-219ENST00000559822 KRTAP4-16G5E9R7 235 aaPredicted RBP7.03□□□□□ -1.28
SPG11-219ENST00000559822 LEPROTO15243 131 aa7.03□□□□□ -1.28
SPG11-219ENST00000559822 NMUP48645 174 aa7.03□□□□□ -1.28
SPG11-219ENST00000559822 HSPB8Q9UJY1 196 aa7.03□□□□□ -1.28
SPG11-219ENST00000559822 LOC107984156A0A0G2JMH3 177 aa7.02□□□□□ -1.29
SPG11-219ENST00000559822 TRBV10-2A0A0K0K1G8 114 aa7.02□□□□□ -1.29
SPG11-219ENST00000559822 TRGC2P03986 189 aa7.02□□□□□ -1.29
SPG11-219ENST00000559822 ARL17AQ8IVW1 177 aa7.02□□□□□ -1.29
SPG11-219ENST00000559822 Q8NBF4 154 aa7.02□□□□□ -1.29
SPG11-219ENST00000559822 J3QQQ9 107 aa7.01□□□□□ -1.29
SPG11-219ENST00000559822 SERF1AO75920 110 aa7.01□□□□□ -1.29
SPG11-219ENST00000559822 DPM2O94777 84 aa7.01□□□□□ -1.29
SPG11-219ENST00000559822 SPINK1P00995 79 aa7.01□□□□□ -1.29
SPG11-219ENST00000559822 DDTP30046 118 aa7.01□□□□□ -1.29
SPG11-219ENST00000559822 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
SPG11-219ENST00000559822 SPANXB1Q9NS25 103 aaPredicted RBP7.01□□□□□ -1.29
SPG11-219ENST00000559822 B5MCH6 92 aa7□□□□□ -1.29
SPG11-219ENST00000559822 LGALS3P17931 250 aaKnown RBP7□□□□□ -1.29
SPG11-219ENST00000559822 TSPEAR-AS2P59090 65 aa7□□□□□ -1.29
SPG11-219ENST00000559822 DAND5Q8N907 189 aa7□□□□□ -1.29
SPG11-219ENST00000559822 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
SPG11-219ENST00000559822 NDUFC2O95298 119 aa6.98□□□□□ -1.29
SPG11-219ENST00000559822 IGKCP01834 107 aa6.98□□□□□ -1.29
SPG11-219ENST00000559822 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
SPG11-219ENST00000559822 Q6ZRX8 168 aa6.98□□□□□ -1.29
SPG11-219ENST00000559822 FABP4P15090 132 aa6.97□□□□□ -1.29
SPG11-219ENST00000559822 LINC00310P59036 64 aa6.97□□□□□ -1.29
SPG11-219ENST00000559822 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
SPG11-219ENST00000559822 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
SPG11-219ENST00000559822 CBY1Q9Y3M2 126 aa6.97□□□□□ -1.29
SPG11-219ENST00000559822 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
SPG11-219ENST00000559822 MOBPQ13875 183 aa6.96□□□□□ -1.3
SPG11-219ENST00000559822 TRAV23DV6A0A075B6W5 121 aa6.95□□□□□ -1.3
SPG11-219ENST00000559822 IGLV9-49A0A0B4J1Y8 123 aa6.95□□□□□ -1.3
SPG11-219ENST00000559822 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
SPG11-219ENST00000559822 PMCHL2Q9BQD1 86 aa6.95□□□□□ -1.3
SPG11-219ENST00000559822 Q9BRP9 147 aa6.95□□□□□ -1.3
SPG11-219ENST00000559822 ERC2-IT1O76042 136 aa6.94□□□□□ -1.3
SPG11-219ENST00000559822 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
SPG11-219ENST00000559822 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
SPG11-219ENST00000559822 E9PLD3 99 aa6.93□□□□□ -1.3
SPG11-219ENST00000559822 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
SPG11-219ENST00000559822 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
SPG11-219ENST00000559822 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
SPG11-219ENST00000559822 C5orf52A6NGY3 159 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms