RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
ABCD4-228ENST00000557588 H3BRM9 83 aa10.17□□□□□ -0.78
ABCD4-228ENST00000557588 RAB14P61106 215 aa10.17□□□□□ -0.78
ABCD4-228ENST00000557588 COX17Q14061 63 aa10.17□□□□□ -0.78
ABCD4-228ENST00000557588 Q8N377 158 aa10.16□□□□□ -0.78
ABCD4-228ENST00000557588 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
ABCD4-228ENST00000557588 PMVKQ15126 192 aa10.14□□□□□ -0.79
ABCD4-228ENST00000557588 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
ABCD4-228ENST00000557588 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
ABCD4-228ENST00000557588 LINC01546A6NGU7 62 aa10.1□□□□□ -0.79
ABCD4-228ENST00000557588 SLC25A20O43772 301 aa10.1□□□□□ -0.79
ABCD4-228ENST00000557588 IGLC3P0DOY3 106 aa10.1□□□□□ -0.79
ABCD4-228ENST00000557588 ANAPC16Q96DE5 110 aa10.1□□□□□ -0.79
ABCD4-228ENST00000557588 PRYO14603 147 aa10.09□□□□□ -0.79
ABCD4-228ENST00000557588 SPRR1AP35321 89 aa10.09□□□□□ -0.79
ABCD4-228ENST00000557588 KRTAP10-6P60371 365 aaPredicted RBP10.09□□□□□ -0.79
ABCD4-228ENST00000557588 ZNF625Q96I27 306 aaPredicted RBP10.09□□□□□ -0.79
ABCD4-228ENST00000557588 MT-ND4LP03901 98 aa10.08□□□□□ -0.8
ABCD4-228ENST00000557588 MOBPQ13875 183 aa10.08□□□□□ -0.8
ABCD4-228ENST00000557588 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
ABCD4-228ENST00000557588 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
ABCD4-228ENST00000557588 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
ABCD4-228ENST00000557588 KRTAP4-16G5E9R7 235 aaPredicted RBP10.06□□□□□ -0.8
ABCD4-228ENST00000557588 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
ABCD4-228ENST00000557588 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
ABCD4-228ENST00000557588 hCG_2014768A0A024R1R8 64 aa10.04□□□□□ -0.8
ABCD4-228ENST00000557588 KCNQ1DNQ9H478 68 aa10.04□□□□□ -0.8
ABCD4-228ENST00000557588 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
ABCD4-228ENST00000557588 GAGE2AQ6NT46 116 aa10.03□□□□□ -0.8
ABCD4-228ENST00000557588 ETDCA0A1B0GVM5 59 aa10.02□□□□□ -0.81
ABCD4-228ENST00000557588 PCOTHQ58A44 107 aa10.01□□□□□ -0.81
ABCD4-228ENST00000557588 IGLV8-61A0A075B6I0 122 aa10□□□□□ -0.81
ABCD4-228ENST00000557588 LINC00158P58513 81 aa10□□□□□ -0.81
ABCD4-228ENST00000557588 NCR3O14931 201 aa9.97□□□□□ -0.81
ABCD4-228ENST00000557588 FA2HQ7L5A8 372 aa9.97□□□□□ -0.81
ABCD4-228ENST00000557588 BOD1L2Q8IYS8 172 aa9.97□□□□□ -0.81
ABCD4-228ENST00000557588 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
ABCD4-228ENST00000557588 ERC2-IT1O76042 136 aa9.96□□□□□ -0.82
ABCD4-228ENST00000557588 NDUFA6P56556 154 aa9.96□□□□□ -0.82
ABCD4-228ENST00000557588 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
ABCD4-228ENST00000557588 FLGP20930 4061 aaPredicted RBP9.96□□□□□ -0.82
ABCD4-228ENST00000557588 A0A096LNJ9 63 aa9.95□□□□□ -0.82
ABCD4-228ENST00000557588 TRBV10-3A0A0K0K1G6 114 aa9.95□□□□□ -0.82
ABCD4-228ENST00000557588 A0A0U1RRA0 63 aa9.95□□□□□ -0.82
ABCD4-228ENST00000557588 B5MCH6 92 aa9.95□□□□□ -0.82
ABCD4-228ENST00000557588 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
ABCD4-228ENST00000557588 KRTAP9-7A8MTY7 169 aa9.94□□□□□ -0.82
ABCD4-228ENST00000557588 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
ABCD4-228ENST00000557588 Q9BRP9 147 aa9.92□□□□□ -0.82
ABCD4-228ENST00000557588 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.91□□□□□ -0.82
ABCD4-228ENST00000557588 M0R2T5 61 aa9.91□□□□□ -0.82
ABCD4-228ENST00000557588 SMIM13P0DJ93 91 aa9.91□□□□□ -0.82
ABCD4-228ENST00000557588 S100A12P80511 92 aa9.9□□□□□ -0.82
ABCD4-228ENST00000557588 C9orf153Q5TBE3 101 aa9.9□□□□□ -0.82
ABCD4-228ENST00000557588 Q6ZRX8 168 aa9.9□□□□□ -0.82
ABCD4-228ENST00000557588 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.82
ABCD4-228ENST00000557588 ATP6V1G1O75348 118 aa9.88□□□□□ -0.83
ABCD4-228ENST00000557588 BAGE3Q86Y29 109 aa9.88□□□□□ -0.83
ABCD4-228ENST00000557588 C9orf92A6NGG3 77 aa9.87□□□□□ -0.83
ABCD4-228ENST00000557588 HBDP02042 147 aa9.87□□□□□ -0.83
ABCD4-228ENST00000557588 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
ABCD4-228ENST00000557588 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
ABCD4-228ENST00000557588 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
ABCD4-228ENST00000557588 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
ABCD4-228ENST00000557588 DDTP30046 118 aa9.83□□□□□ -0.84
ABCD4-228ENST00000557588 HERV-K104P63124 156 aa9.83□□□□□ -0.84
ABCD4-228ENST00000557588 COX19Q49B96 90 aa9.83□□□□□ -0.84
ABCD4-228ENST00000557588 PMCHL1Q16048 86 aa9.82□□□□□ -0.84
ABCD4-228ENST00000557588 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
ABCD4-228ENST00000557588 TRBV10-2A0A0K0K1G8 114 aa9.81□□□□□ -0.84
ABCD4-228ENST00000557588 LINC00587B1AMM8 73 aa9.81□□□□□ -0.84
ABCD4-228ENST00000557588 S100PP25815 95 aa9.81□□□□□ -0.84
ABCD4-228ENST00000557588 FABP9Q0Z7S8 132 aa9.81□□□□□ -0.84
ABCD4-228ENST00000557588 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
ABCD4-228ENST00000557588 LOC107984156A0A0G2JMH3 177 aa9.8□□□□□ -0.84
ABCD4-228ENST00000557588 LINC00614P0C842 121 aa9.8□□□□□ -0.84
ABCD4-228ENST00000557588 ARL17AQ8IVW1 177 aa9.8□□□□□ -0.84
ABCD4-228ENST00000557588 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
ABCD4-228ENST00000557588 JOSD1Q15040 202 aaPredicted RBP9.79□□□□□ -0.84
ABCD4-228ENST00000557588 C18orf32Q8TCD1 76 aa9.79□□□□□ -0.84
ABCD4-228ENST00000557588 MAP1LC3CQ9BXW4 147 aa9.78□□□□□ -0.84
ABCD4-228ENST00000557588 SSPOA2VEC9 5147 aa9.77□□□□□ -0.84
ABCD4-228ENST00000557588 C5orf52A6NGY3 159 aa9.77□□□□□ -0.85
ABCD4-228ENST00000557588 ST20-AS1Q8NBB2 130 aa9.77□□□□□ -0.85
ABCD4-228ENST00000557588 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
ABCD4-228ENST00000557588 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
ABCD4-228ENST00000557588 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
ABCD4-228ENST00000557588 USH2AO75445 5202 aa9.75□□□□□ -0.85
ABCD4-228ENST00000557588 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
ABCD4-228ENST00000557588 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
ABCD4-228ENST00000557588 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
ABCD4-228ENST00000557588 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
ABCD4-228ENST00000557588 SPRR1BP22528 89 aa9.73□□□□□ -0.85
ABCD4-228ENST00000557588 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
ABCD4-228ENST00000557588 S100A7L2Q5SY68 101 aa9.71□□□□□ -0.86
ABCD4-228ENST00000557588 NDUFC2O95298 119 aa9.7□□□□□ -0.86
ABCD4-228ENST00000557588 SLC25A34Q6PIV7 304 aa9.7□□□□□ -0.86
ABCD4-228ENST00000557588 TMEM218A2RU14 115 aa9.69□□□□□ -0.86
ABCD4-228ENST00000557588 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
ABCD4-228ENST00000557588 CD164Q04900 197 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms