RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 DNAH3Q8TD57 4116 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 GAGE2BQ13066 116 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 COX17Q14061 63 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 GAGE2EQ4V326 116 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 C11orf45Q8TAV5 145 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 SMCR5Q8TEV8 140 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 GAGE2DQ9UEU5 116 aa12.93□□□□□ -0.34
FOXN3-214ENST00000557258 H0YGX0 51 aa12.92□□□□□ -0.34
FOXN3-214ENST00000557258 C6orf99Q4VX62 202 aa12.92□□□□□ -0.34
FOXN3-214ENST00000557258 S100A7L2Q5SY68 101 aa12.92□□□□□ -0.34
FOXN3-214ENST00000557258 STAB2Q8WWQ8 2551 aa12.9□□□□□ -0.34
FOXN3-214ENST00000557258 TMEM126AQ9H061 195 aa12.89□□□□□ -0.35
FOXN3-214ENST00000557258 COL7A1Q02388 2944 aa12.89□□□□□ -0.35
FOXN3-214ENST00000557258 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
FOXN3-214ENST00000557258 ANAPC13Q9BS18 74 aa12.87□□□□□ -0.35
FOXN3-214ENST00000557258 IGKV2D-24A0A075B6R9 120 aa12.87□□□□□ -0.35
FOXN3-214ENST00000557258 CAMK2N2Q96S95 79 aa12.86□□□□□ -0.35
FOXN3-214ENST00000557258 NDUFC2O95298 119 aa12.86□□□□□ -0.35
FOXN3-214ENST00000557258 FAM240AA0A1B0GVK7 77 aa12.85□□□□□ -0.35
FOXN3-214ENST00000557258 SS18L2Q9UHA2 77 aa12.85□□□□□ -0.35
FOXN3-214ENST00000557258 TENM2Q9NT68 2774 aa12.84□□□□□ -0.35
FOXN3-214ENST00000557258 Q6ZRU5 148 aa12.84□□□□□ -0.35
FOXN3-214ENST00000557258 Q8N814 137 aa12.84□□□□□ -0.35
FOXN3-214ENST00000557258 ORMDL1Q9P0S3 153 aa12.84□□□□□ -0.35
FOXN3-214ENST00000557258 KRTAP26-1Q6PEX3 210 aa12.83□□□□□ -0.36
FOXN3-214ENST00000557258 C15orf56Q8N910 161 aa12.83□□□□□ -0.36
FOXN3-214ENST00000557258 HUWE1Q7Z6Z7 4374 aaKnown RBP12.82□□□□□ -0.36
FOXN3-214ENST00000557258 INAFM2P0DMQ5 153 aa12.82□□□□□ -0.36
FOXN3-214ENST00000557258 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
FOXN3-214ENST00000557258 TRBV10-3A0A0K0K1G6 114 aa12.81□□□□□ -0.36
FOXN3-214ENST00000557258 H3BNG1 76 aa12.81□□□□□ -0.36
FOXN3-214ENST00000557258 NDUFV3P56181 108 aaKnown RBP12.8□□□□□ -0.36
FOXN3-214ENST00000557258 B5MCH6 92 aa12.79□□□□□ -0.36
FOXN3-214ENST00000557258 NHLRC4P0CG21 123 aaPredicted RBP12.79□□□□□ -0.36
FOXN3-214ENST00000557258 CSMD3Q7Z407 3707 aa12.77□□□□□ -0.37
FOXN3-214ENST00000557258 ACYP1P07311 99 aa12.76□□□□□ -0.37
FOXN3-214ENST00000557258 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
FOXN3-214ENST00000557258 K7EIL1 84 aa12.75□□□□□ -0.37
FOXN3-214ENST00000557258 IGLV6-57P01721 117 aa12.75□□□□□ -0.37
FOXN3-214ENST00000557258 LINC01556Q5JQF7 62 aa12.75□□□□□ -0.37
FOXN3-214ENST00000557258 LINC00846Q9NV44 126 aa12.75□□□□□ -0.37
FOXN3-214ENST00000557258 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
FOXN3-214ENST00000557258 LINC00575Q6W349 94 aa12.74□□□□□ -0.37
FOXN3-214ENST00000557258 Q6ZRP5 223 aa12.74□□□□□ -0.37
FOXN3-214ENST00000557258 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
FOXN3-214ENST00000557258 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
FOXN3-214ENST00000557258 TRAV23DV6A0A075B6W5 121 aa12.72□□□□□ -0.37
FOXN3-214ENST00000557258 SDIM1Q6ZPB5 146 aa12.72□□□□□ -0.37
FOXN3-214ENST00000557258 IGKV3D-7A0A0C4DH55 119 aa12.72□□□□□ -0.37
FOXN3-214ENST00000557258 hADV29S1A0JD25 119 aa12.72□□□□□ -0.37
FOXN3-214ENST00000557258 FAM236AA0A1B0GUQ0 79 aa12.71□□□□□ -0.37
FOXN3-214ENST00000557258 FAM236BA0A1B0GV22 79 aa12.71□□□□□ -0.37
FOXN3-214ENST00000557258 Q6ZQY7 126 aa12.71□□□□□ -0.37
FOXN3-214ENST00000557258 DNAH10Q8IVF4 4471 aa12.71□□□□□ -0.37
FOXN3-214ENST00000557258 LINC00643Q86TS7 51 aa12.7□□□□□ -0.38
FOXN3-214ENST00000557258 LINC00167Q96N53 147 aa12.7□□□□□ -0.38
FOXN3-214ENST00000557258 CCDC179H3BU77 68 aa12.69□□□□□ -0.38
FOXN3-214ENST00000557258 VPREB1P12018 145 aa12.69□□□□□ -0.38
FOXN3-214ENST00000557258 TMEM256-PLSCR3K7ERE1 68 aa12.69□□□□□ -0.38
FOXN3-214ENST00000557258 Q6Q795 121 aa12.69□□□□□ -0.38
FOXN3-214ENST00000557258 TRBV7-7A0A0K0K1E9 115 aa12.68□□□□□ -0.38
FOXN3-214ENST00000557258 NDUFC2-KCTD14E9PQ53 114 aa12.68□□□□□ -0.38
FOXN3-214ENST00000557258 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-214ENST00000557258 TRAV10A0A0B4J240 114 aa12.67□□□□□ -0.38
FOXN3-214ENST00000557258 LAMTOR3Q9UHA4 124 aa12.67□□□□□ -0.38
FOXN3-214ENST00000557258 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
FOXN3-214ENST00000557258 DIRC1Q969H9 104 aa12.66□□□□□ -0.38
FOXN3-214ENST00000557258 DNAH10OSP0CZ25 163 aa12.65□□□□□ -0.38
FOXN3-214ENST00000557258 TM2D3Q9BRN9 247 aa12.65□□□□□ -0.38
FOXN3-214ENST00000557258 A0A1B0GX51 115 aa12.64□□□□□ -0.39
FOXN3-214ENST00000557258 M0R2N4 97 aa12.64□□□□□ -0.39
FOXN3-214ENST00000557258 A0A087WVE0 104 aa12.63□□□□□ -0.39
FOXN3-214ENST00000557258 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
FOXN3-214ENST00000557258 MUC7Q8TAX7 377 aa12.63□□□□□ -0.39
FOXN3-214ENST00000557258 DNAH1Q9P2D7 4330 aa12.63□□□□□ -0.39
FOXN3-214ENST00000557258 FAM168BA1KXE4 195 aa12.62□□□□□ -0.39
FOXN3-214ENST00000557258 CCKP06307 115 aa12.62□□□□□ -0.39
FOXN3-214ENST00000557258 C2orf48Q96LS8 159 aa12.62□□□□□ -0.39
FOXN3-214ENST00000557258 USP17L23D6RBM5 183 aa12.62□□□□□ -0.39
FOXN3-214ENST00000557258 DNAH7Q8WXX0 4024 aa12.61□□□□□ -0.39
FOXN3-214ENST00000557258 COX7BP24311 80 aa12.61□□□□□ -0.39
FOXN3-214ENST00000557258 JMJD7-PLA2G4BH0Y9G9 81 aa12.6□□□□□ -0.39
FOXN3-214ENST00000557258 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
FOXN3-214ENST00000557258 M0R378 163 aa12.59□□□□□ -0.39
FOXN3-214ENST00000557258 RBM3P98179 157 aaKnown RBP12.58□□□□□ -0.4
FOXN3-214ENST00000557258 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
FOXN3-214ENST00000557258 SMIM20Q8N5G0 67 aa12.57□□□□□ -0.4
FOXN3-214ENST00000557258 ELOF1P60002 83 aaKnown RBP12.57□□□□□ -0.4
FOXN3-214ENST00000557258 MDFIQ99750 246 aa12.56□□□□□ -0.4
FOXN3-214ENST00000557258 NKAPP1Q8N9T2 125 aa12.55□□□□□ -0.4
FOXN3-214ENST00000557258 HIST1H4AP62805 103 aaKnown RBP12.55□□□□□ -0.4
FOXN3-214ENST00000557258 IMUPQ9GZP8 106 aa12.54□□□□□ -0.4
FOXN3-214ENST00000557258 C7orf33Q8WU49 177 aa12.54□□□□□ -0.4
FOXN3-214ENST00000557258 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
FOXN3-214ENST00000557258 Q6ZQT0 140 aa12.52□□□□□ -0.41
FOXN3-214ENST00000557258 DEFB105AQ8NG35 78 aa12.52□□□□□ -0.41
FOXN3-214ENST00000557258 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-214ENST00000557258 DSCR8Q96T75 97 aa12.5□□□□□ -0.41
FOXN3-214ENST00000557258 LINC00528Q8N1L1 170 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms