RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DNAH10OSP0CZ25 163 aa11.77□□□□□ -0.53
PTPN21-208ENST00000556564 HECTD1Q9ULT8 2610 aa11.74□□□□□ -0.53
PTPN21-208ENST00000556564 LIMD2Q9BT23 127 aa11.74□□□□□ -0.53
PTPN21-208ENST00000556564 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
PTPN21-208ENST00000556564 MOBPQ13875 183 aa11.73□□□□□ -0.53
PTPN21-208ENST00000556564 SNURFQ9Y675 71 aa11.72□□□□□ -0.53
PTPN21-208ENST00000556564 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
PTPN21-208ENST00000556564 KIAA0087Q14695 138 aa11.72□□□□□ -0.53
PTPN21-208ENST00000556564 IGLV5-45A0A087WSX0 123 aa11.71□□□□□ -0.53
PTPN21-208ENST00000556564 GVQW2A0A096LPI5 108 aaPredicted RBP11.71□□□□□ -0.54
PTPN21-208ENST00000556564 SPACA4Q8TDM5 124 aa11.71□□□□□ -0.54
PTPN21-208ENST00000556564 C3orf22Q8N5N4 141 aa11.71□□□□□ -0.54
PTPN21-208ENST00000556564 Q6ZRP5 223 aa11.69□□□□□ -0.54
PTPN21-208ENST00000556564 Q6ZVQ6 151 aa11.68□□□□□ -0.54
PTPN21-208ENST00000556564 TRANK1O15050 2925 aa11.68□□□□□ -0.54
PTPN21-208ENST00000556564 FAM168BA1KXE4 195 aa11.68□□□□□ -0.54
PTPN21-208ENST00000556564 PRR4Q16378 134 aa11.68□□□□□ -0.54
PTPN21-208ENST00000556564 PRRC2CQ9Y520 2896 aaKnown RBP11.68□□□□□ -0.54
PTPN21-208ENST00000556564 EPM2AB3EWF7 344 aa11.65□□□□□ -0.54
PTPN21-208ENST00000556564 LINC01547P58512 204 aaPredicted RBP11.65□□□□□ -0.54
PTPN21-208ENST00000556564 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
PTPN21-208ENST00000556564 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
PTPN21-208ENST00000556564 RPL37AP61513 92 aaKnown RBP11.65□□□□□ -0.55
PTPN21-208ENST00000556564 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
PTPN21-208ENST00000556564 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
PTPN21-208ENST00000556564 PRUNE2Q8WUY3 3088 aa11.62□□□□□ -0.55
PTPN21-208ENST00000556564 TYMSOSQ8TAI1 123 aa11.62□□□□□ -0.55
PTPN21-208ENST00000556564 UQCRQO14949 82 aa11.62□□□□□ -0.55
PTPN21-208ENST00000556564 Q8N9L7 120 aa11.62□□□□□ -0.55
PTPN21-208ENST00000556564 BPTFQ12830 3046 aa11.61□□□□□ -0.55
PTPN21-208ENST00000556564 CDH23Q9H251 3354 aa11.61□□□□□ -0.55
PTPN21-208ENST00000556564 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
PTPN21-208ENST00000556564 MUC4Q99102 2169 aa11.6□□□□□ -0.55
PTPN21-208ENST00000556564 J3QL48 77 aa11.59□□□□□ -0.55
PTPN21-208ENST00000556564 ELOF1P60002 83 aaKnown RBP11.59□□□□□ -0.55
PTPN21-208ENST00000556564 J3KT08 172 aa11.59□□□□□ -0.55
PTPN21-208ENST00000556564 A0A087WVE0 104 aa11.59□□□□□ -0.55
PTPN21-208ENST00000556564 CRYGAP11844 174 aa11.59□□□□□ -0.55
PTPN21-208ENST00000556564 ST20-AS1Q8NBB2 130 aa11.59□□□□□ -0.55
PTPN21-208ENST00000556564 Q6ZRX8 168 aa11.58□□□□□ -0.56
PTPN21-208ENST00000556564 BCE1O60756 84 aa11.57□□□□□ -0.56
PTPN21-208ENST00000556564 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
PTPN21-208ENST00000556564 LINC00208Q96KT6 92 aa11.56□□□□□ -0.56
PTPN21-208ENST00000556564 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
PTPN21-208ENST00000556564 IMUPQ9GZP8 106 aa11.56□□□□□ -0.56
PTPN21-208ENST00000556564 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
PTPN21-208ENST00000556564 FLNBO75369 2602 aaKnown RBP11.55□□□□□ -0.56
PTPN21-208ENST00000556564 A0A087WTM6 91 aa11.54□□□□□ -0.56
PTPN21-208ENST00000556564 SMR3BP02814 79 aaPredicted RBP11.54□□□□□ -0.56
PTPN21-208ENST00000556564 CR1P17927 2039 aa11.54□□□□□ -0.56
PTPN21-208ENST00000556564 HCG22E2RYF7 251 aa11.54□□□□□ -0.56
PTPN21-208ENST00000556564 LINC00612Q8N6U2 182 aa11.53□□□□□ -0.56
PTPN21-208ENST00000556564 FAM218AQ96MZ4 157 aa11.53□□□□□ -0.56
PTPN21-208ENST00000556564 PCOTHQ58A44 107 aa11.52□□□□□ -0.56
PTPN21-208ENST00000556564 C15orf56Q8N910 161 aa11.52□□□□□ -0.56
PTPN21-208ENST00000556564 Q8NBF4 154 aa11.52□□□□□ -0.57
PTPN21-208ENST00000556564 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
PTPN21-208ENST00000556564 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
PTPN21-208ENST00000556564 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
PTPN21-208ENST00000556564 LINC00846Q9NV44 126 aa11.5□□□□□ -0.57
PTPN21-208ENST00000556564 UNC80Q8N2C7 3258 aa11.49□□□□□ -0.57
PTPN21-208ENST00000556564 SERP1Q9Y6X1 66 aa11.49□□□□□ -0.57
PTPN21-208ENST00000556564 VPREB1P12018 145 aa11.49□□□□□ -0.57
PTPN21-208ENST00000556564 PRR15LQ9BU68 103 aa11.48□□□□□ -0.57
PTPN21-208ENST00000556564 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
PTPN21-208ENST00000556564 H0Y9P7 68 aa11.47□□□□□ -0.57
PTPN21-208ENST00000556564 SPINK1P00995 79 aa11.46□□□□□ -0.57
PTPN21-208ENST00000556564 CASC10Q5T4H9 136 aa11.46□□□□□ -0.57
PTPN21-208ENST00000556564 NDUFC1O43677 76 aa11.46□□□□□ -0.57
PTPN21-208ENST00000556564 IGKV2D-30A0A075B6S6 120 aa11.46□□□□□ -0.57
PTPN21-208ENST00000556564 IGKV2-30P06310 120 aa11.46□□□□□ -0.57
PTPN21-208ENST00000556564 Q6Q795 121 aa11.45□□□□□ -0.58
PTPN21-208ENST00000556564 SPTSSBQ8NFR3 76 aa11.45□□□□□ -0.58
PTPN21-208ENST00000556564 COX7CP15954 63 aa11.44□□□□□ -0.58
PTPN21-208ENST00000556564 IGLV1-50A0A075B6I6 118 aa11.43□□□□□ -0.58
PTPN21-208ENST00000556564 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
PTPN21-208ENST00000556564 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
PTPN21-208ENST00000556564 CCDC179H3BU77 68 aa11.41□□□□□ -0.58
PTPN21-208ENST00000556564 HELZ2Q9BYK8 2649 aaKnown RBP11.41□□□□□ -0.58
PTPN21-208ENST00000556564 LITAFQ99732 161 aa11.41□□□□□ -0.58
PTPN21-208ENST00000556564 IGLV6-57P01721 117 aa11.4□□□□□ -0.58
PTPN21-208ENST00000556564 K7ERS5 55 aa11.4□□□□□ -0.58
PTPN21-208ENST00000556564 FLNAP21333 2647 aaKnown RBP11.4□□□□□ -0.58
PTPN21-208ENST00000556564 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
PTPN21-208ENST00000556564 BRK1Q8WUW1 75 aa11.39□□□□□ -0.59
PTPN21-208ENST00000556564 ATP5EP56381 51 aaPredicted RBP11.38□□□□□ -0.59
PTPN21-208ENST00000556564 ITPR3Q14573 2671 aa11.38□□□□□ -0.59
PTPN21-208ENST00000556564 SMIM29Q86T20 159 aa11.38□□□□□ -0.59
PTPN21-208ENST00000556564 LINC00313P59037 77 aa11.36□□□□□ -0.59
PTPN21-208ENST00000556564 XIRP2A4UGR9 3374 aa11.36□□□□□ -0.59
PTPN21-208ENST00000556564 SZT2Q5T011 3432 aa11.36□□□□□ -0.59
PTPN21-208ENST00000556564 hDV103S1A0JD37 113 aa11.36□□□□□ -0.59
PTPN21-208ENST00000556564 MGAQ8IWI9 3026 aa11.35□□□□□ -0.59
PTPN21-208ENST00000556564 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
PTPN21-208ENST00000556564 CXCL6P80162 114 aa11.35□□□□□ -0.59
PTPN21-208ENST00000556564 Q96NJ1 140 aa11.35□□□□□ -0.59
PTPN21-208ENST00000556564 LAMA2P24043 3122 aaKnown RBP11.35□□□□□ -0.59
PTPN21-208ENST00000556564 ZNF575Q86XF7 245 aa11.34□□□□□ -0.59
PTPN21-208ENST00000556564 Q6ZQT0 140 aa11.33□□□□□ -0.6
PTPN21-208ENST00000556564 KCNQ1DNQ9H478 68 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms