RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 IGKV2D-28P01615 120 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 FABP4P15090 132 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 TSPEAR-AS2P59090 65 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 COX17Q14061 63 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 KRTAP13-1Q8IUC0 172 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 NKAPP1Q8N9T2 125 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 PMCHL2Q9BQD1 86 aa4.84□□□□□ -1.63
VTI1B-206ENST00000556461 TMEM238C9JI98 176 aa4.83□□□□□ -1.64
VTI1B-206ENST00000556461 SMIM13P0DJ93 91 aa4.83□□□□□ -1.64
VTI1B-206ENST00000556461 LINC00158P58513 81 aa4.83□□□□□ -1.64
VTI1B-206ENST00000556461 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
VTI1B-206ENST00000556461 RPL28P46779 137 aaKnown RBP4.82□□□□□ -1.64
VTI1B-206ENST00000556461 SMCPP49901 116 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-206ENST00000556461 SFTA2Q6UW10 78 aa4.82□□□□□ -1.64
VTI1B-206ENST00000556461 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
VTI1B-206ENST00000556461 NDUFA12Q9UI09 145 aa4.82□□□□□ -1.64
VTI1B-206ENST00000556461 A0A087X002 238 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 M0R378 163 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BKO60814 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BJP06899 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BOP23527 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BBP33778 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BDP58876 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BCP62807 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 RPL24P83731 157 aaKnown RBP4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST2H2BEQ16778 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BHQ93079 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BNQ99877 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HIST1H2BMQ99879 126 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 HSPB8Q9UJY1 196 aa4.81□□□□□ -1.64
VTI1B-206ENST00000556461 LEPROTO15243 131 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 DPM2O94777 84 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 UBE2AP49459 152 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 PRLHP81277 87 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 MEIG1Q5JSS6 88 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
VTI1B-206ENST00000556461 NCR3O14931 201 aa4.79□□□□□ -1.64
VTI1B-206ENST00000556461 IGKCP01834 107 aa4.79□□□□□ -1.64
VTI1B-206ENST00000556461 PLNP26678 52 aa4.79□□□□□ -1.64
VTI1B-206ENST00000556461 HERV-K104P63124 156 aa4.79□□□□□ -1.64
VTI1B-206ENST00000556461 FAM19A1Q7Z5A9 133 aa4.79□□□□□ -1.64
VTI1B-206ENST00000556461 DAND5Q8N907 189 aa4.79□□□□□ -1.64
VTI1B-206ENST00000556461 MYMXA0A1B0GTQ4 84 aa4.78□□□□□ -1.64
VTI1B-206ENST00000556461 J3QQQ9 107 aa4.78□□□□□ -1.64
VTI1B-206ENST00000556461 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.64
VTI1B-206ENST00000556461 BOD1L2Q8IYS8 172 aa4.78□□□□□ -1.64
VTI1B-206ENST00000556461 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
VTI1B-206ENST00000556461 MAP1LC3CQ9BXW4 147 aa4.78□□□□□ -1.64
VTI1B-206ENST00000556461 SYS1-DBNDD2H3BUS1 97 aa4.77□□□□□ -1.65
VTI1B-206ENST00000556461 ATP6V1G1O75348 118 aa4.77□□□□□ -1.65
VTI1B-206ENST00000556461 RPL13AP40429 203 aaKnown RBP4.77□□□□□ -1.65
VTI1B-206ENST00000556461 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-206ENST00000556461 CRYGAP11844 174 aa4.76□□□□□ -1.65
VTI1B-206ENST00000556461 HERVK_113P61574 105 aa4.76□□□□□ -1.65
VTI1B-206ENST00000556461 TRBV10-3A0A0K0K1G6 114 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 E9PLD3 99 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 TSPAN13O95857 204 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 LGALS3P17931 250 aaKnown RBP4.75□□□□□ -1.65
VTI1B-206ENST00000556461 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 LINC01545Q5VT33 79 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 SOSTDC1Q6X4U4 206 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 TYMSOSQ8TAI1 123 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 KCNQ1DNQ9H478 68 aa4.75□□□□□ -1.65
VTI1B-206ENST00000556461 LOC107984156A0A0G2JMH3 177 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 LINC00587B1AMM8 73 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 KRTAP4-16G5E9R7 235 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-206ENST00000556461 PRYO14603 147 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 C3orf79P0CE67 100 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 SPRR1AP35321 89 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 NMUP48645 174 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 NPC2P61916 151 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 COA6Q5JTJ3 125 aaKnown RBP4.74□□□□□ -1.65
VTI1B-206ENST00000556461 ARL17AQ8IVW1 177 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 HIGD2AQ9BW72 106 aa4.74□□□□□ -1.65
VTI1B-206ENST00000556461 IGKV2D-26A0A0A0MRZ7 120 aa4.73□□□□□ -1.65
VTI1B-206ENST00000556461 PET117Q6UWS5 81 aa4.73□□□□□ -1.65
VTI1B-206ENST00000556461 C3orf22Q8N5N4 141 aa4.73□□□□□ -1.65
VTI1B-206ENST00000556461 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
VTI1B-206ENST00000556461 PRR4Q16378 134 aa4.72□□□□□ -1.65
VTI1B-206ENST00000556461 LINC00337Q8N6G1 96 aa4.72□□□□□ -1.65
VTI1B-206ENST00000556461 SMCR5Q8TEV8 140 aa4.72□□□□□ -1.65
VTI1B-206ENST00000556461 SPRR4Q96PI1 79 aa4.72□□□□□ -1.65
VTI1B-206ENST00000556461 LITAFQ99732 161 aa4.72□□□□□ -1.65
VTI1B-206ENST00000556461 TRBV10-2A0A0K0K1G8 114 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 ETDCA0A1B0GVM5 59 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 A6NJY4 79 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 B5MCH6 92 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 ERC2-IT1O76042 136 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 DDTP30046 118 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 KRTDAPP60985 99 aa4.71□□□□□ -1.66
VTI1B-206ENST00000556461 IGLV6-57P01721 117 aa4.7□□□□□ -1.66
VTI1B-206ENST00000556461 ANKRD39Q53RE8 183 aa4.7□□□□□ -1.66
VTI1B-206ENST00000556461 PPDPFQ9H3Y8 114 aa4.7□□□□□ -1.66
VTI1B-206ENST00000556461 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-206ENST00000556461 ZNF815PA8K554 130 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms