RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 XAGE1AQ9HD64 81 aa5.94□□□□□ -1.46
ACTN1-218ENST00000556343 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
ACTN1-218ENST00000556343 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
ACTN1-218ENST00000556343 RAB37Q96AX2 223 aa5.93□□□□□ -1.46
ACTN1-218ENST00000556343 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
ACTN1-218ENST00000556343 CBY1Q9Y3M2 126 aa5.93□□□□□ -1.46
ACTN1-218ENST00000556343 KMT2CQ8NEZ4 4911 aaKnown RBP5.93□□□□□ -1.46
ACTN1-218ENST00000556343 TRAV13-2A0A0B4J235 113 aa5.92□□□□□ -1.46
ACTN1-218ENST00000556343 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
ACTN1-218ENST00000556343 A4D1N5 150 aa5.92□□□□□ -1.46
ACTN1-218ENST00000556343 HINT1P49773 126 aaPredicted RBP5.92□□□□□ -1.46
ACTN1-218ENST00000556343 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
ACTN1-218ENST00000556343 RYR2Q92736 4967 aa5.92□□□□□ -1.46
ACTN1-218ENST00000556343 A0A096LNI7 61 aa5.91□□□□□ -1.46
ACTN1-218ENST00000556343 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
ACTN1-218ENST00000556343 BATFQ16520 125 aa5.91□□□□□ -1.46
ACTN1-218ENST00000556343 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
ACTN1-218ENST00000556343 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
ACTN1-218ENST00000556343 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
ACTN1-218ENST00000556343 M0R378 163 aa5.9□□□□□ -1.46
ACTN1-218ENST00000556343 S100A7L2Q5SY68 101 aa5.9□□□□□ -1.46
ACTN1-218ENST00000556343 SOSTDC1Q6X4U4 206 aa5.9□□□□□ -1.46
ACTN1-218ENST00000556343 OR13C6PQ8NH95 151 aa5.9□□□□□ -1.46
ACTN1-218ENST00000556343 FAT2Q9NYQ8 4349 aa5.89□□□□□ -1.47
ACTN1-218ENST00000556343 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
ACTN1-218ENST00000556343 FUSP35637 526 aaKnown RBP eCLIP5.89□□□□□ -1.47
ACTN1-218ENST00000556343 FXYD2P54710 66 aa5.89□□□□□ -1.47
ACTN1-218ENST00000556343 LINC01620Q4KN68 170 aa5.89□□□□□ -1.47
ACTN1-218ENST00000556343 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
ACTN1-218ENST00000556343 NHP2Q9NX24 153 aaKnown RBP5.89□□□□□ -1.47
ACTN1-218ENST00000556343 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
ACTN1-218ENST00000556343 IGLV5-37A0A075B6J1 123 aa5.88□□□□□ -1.47
ACTN1-218ENST00000556343 VPREB1P12018 145 aa5.88□□□□□ -1.47
ACTN1-218ENST00000556343 SPACA4Q8TDM5 124 aa5.88□□□□□ -1.47
ACTN1-218ENST00000556343 PRO1854Q9UHT4 67 aa5.88□□□□□ -1.47
ACTN1-218ENST00000556343 C22orf24Q9Y442 160 aa5.88□□□□□ -1.47
ACTN1-218ENST00000556343 A0A1B0GVY2 172 aa5.87□□□□□ -1.47
ACTN1-218ENST00000556343 NCR3O14931 201 aa5.87□□□□□ -1.47
ACTN1-218ENST00000556343 CHTF8P0CG12 524 aa5.87□□□□□ -1.47
ACTN1-218ENST00000556343 CFC1BP0CG36 223 aa5.87□□□□□ -1.47
ACTN1-218ENST00000556343 CFC1P0CG37 223 aa5.87□□□□□ -1.47
ACTN1-218ENST00000556343 COL5A1-AS1Q5SY13 56 aa5.87□□□□□ -1.47
ACTN1-218ENST00000556343 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
ACTN1-218ENST00000556343 A0A1B0GWB2 263 aa5.86□□□□□ -1.47
ACTN1-218ENST00000556343 M0QXV9 152 aa5.86□□□□□ -1.47
ACTN1-218ENST00000556343 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
ACTN1-218ENST00000556343 Q1RN00 199 aa5.86□□□□□ -1.47
ACTN1-218ENST00000556343 SERTAD4-AS1Q5TG53 156 aa5.86□□□□□ -1.47
ACTN1-218ENST00000556343 MRPL55Q7Z7F7 128 aaKnown RBP5.86□□□□□ -1.47
ACTN1-218ENST00000556343 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 A0A087WYN8 130 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 A0A1W2PNN7 141 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 FAM168BA1KXE4 195 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 KRTAP10-1P60331 282 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 UBE2BP63146 152 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
ACTN1-218ENST00000556343 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
ACTN1-218ENST00000556343 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.85□□□□□ -1.47
ACTN1-218ENST00000556343 DNAH5Q8TE73 4624 aa5.84□□□□□ -1.47
ACTN1-218ENST00000556343 COX6CP09669 75 aa5.84□□□□□ -1.47
ACTN1-218ENST00000556343 RPL13AP40429 203 aaKnown RBP5.84□□□□□ -1.47
ACTN1-218ENST00000556343 VAMP3Q15836 100 aa5.84□□□□□ -1.47
ACTN1-218ENST00000556343 LINC00167Q96N53 147 aa5.84□□□□□ -1.47
ACTN1-218ENST00000556343 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
ACTN1-218ENST00000556343 PKD1P98161 4303 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 GAGE10A6NGK3 116 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 H7C2G1 150 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 IGLV6-57P01721 117 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 PSMB2P49721 201 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 C7orf33Q8WU49 177 aa5.83□□□□□ -1.48
ACTN1-218ENST00000556343 TRAV23DV6A0A075B6W5 121 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 EPM2AB3EWF7 344 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 K7ERJ3 54 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 PRYO14603 147 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 SNCGO76070 127 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 LYRM7Q5U5X0 104 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 Q6ZSA8 131 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
ACTN1-218ENST00000556343 DNAH8Q96JB1 4490 aa5.82□□□□□ -1.48
ACTN1-218ENST00000556343 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
ACTN1-218ENST00000556343 RPL37AP8A6NKH3 93 aa5.81□□□□□ -1.48
ACTN1-218ENST00000556343 PANO1I0J062 215 aa5.81□□□□□ -1.48
ACTN1-218ENST00000556343 SCGB1C2P0DMR2 95 aa5.81□□□□□ -1.48
ACTN1-218ENST00000556343 RPL28P46779 137 aaKnown RBP5.81□□□□□ -1.48
ACTN1-218ENST00000556343 Q8NDZ9 215 aa5.81□□□□□ -1.48
ACTN1-218ENST00000556343 KCNQ1DNQ9H478 68 aa5.81□□□□□ -1.48
ACTN1-218ENST00000556343 RYR3Q15413 4870 aa5.8□□□□□ -1.48
ACTN1-218ENST00000556343 C9orf118A6NHY6 69 aa5.8□□□□□ -1.48
ACTN1-218ENST00000556343 CIRBP-AS1Q8TBR5 109 aa5.8□□□□□ -1.48
ACTN1-218ENST00000556343 SMIM11BQ8TCY0 68 aa5.8□□□□□ -1.48
ACTN1-218ENST00000556343 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
ACTN1-218ENST00000556343 FAM30AQ9NZY2 134 aa5.8□□□□□ -1.48
ACTN1-218ENST00000556343 TRBV7-6A0A0J9YX20 115 aa5.79□□□□□ -1.48
ACTN1-218ENST00000556343 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
ACTN1-218ENST00000556343 H0YGX0 51 aa5.79□□□□□ -1.48
ACTN1-218ENST00000556343 ZNF73O43830 326 aaPredicted RBP5.79□□□□□ -1.48
ACTN1-218ENST00000556343 TSPAN13O95857 204 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms