RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CBY1Q9Y3M2 126 aa7.21□□□□□ -1.26
SHMT2-220ENST00000555634 HERC2O95714 4834 aa7.2□□□□□ -1.26
SHMT2-220ENST00000555634 LINC01620Q4KN68 170 aa7.2□□□□□ -1.26
SHMT2-220ENST00000555634 A6NDN8 102 aa7.19□□□□□ -1.26
SHMT2-220ENST00000555634 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
SHMT2-220ENST00000555634 NDUFC2O95298 119 aa7.19□□□□□ -1.26
SHMT2-220ENST00000555634 SDIM1Q6ZPB5 146 aa7.19□□□□□ -1.26
SHMT2-220ENST00000555634 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
SHMT2-220ENST00000555634 MUSTN1Q8IVN3 82 aa7.19□□□□□ -1.26
SHMT2-220ENST00000555634 RAB37Q96AX2 223 aa7.19□□□□□ -1.26
SHMT2-220ENST00000555634 KMT2AQ03164 3969 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 LOC107984156A0A0G2JMH3 177 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 CTAG1AP78358 180 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 ARL17AQ8IVW1 177 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 SPACA4Q8TDM5 124 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
SHMT2-220ENST00000555634 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
SHMT2-220ENST00000555634 M0QXV9 152 aa7.17□□□□□ -1.26
SHMT2-220ENST00000555634 NCR3O14931 201 aa7.17□□□□□ -1.26
SHMT2-220ENST00000555634 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
SHMT2-220ENST00000555634 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
SHMT2-220ENST00000555634 LBHQ53QV2 105 aaPredicted RBP7.17□□□□□ -1.26
SHMT2-220ENST00000555634 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
SHMT2-220ENST00000555634 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
SHMT2-220ENST00000555634 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
SHMT2-220ENST00000555634 A4D1N5 150 aa7.16□□□□□ -1.26
SHMT2-220ENST00000555634 BATFQ16520 125 aa7.16□□□□□ -1.26
SHMT2-220ENST00000555634 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
SHMT2-220ENST00000555634 M0R378 163 aa7.15□□□□□ -1.26
SHMT2-220ENST00000555634 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
SHMT2-220ENST00000555634 NHP2Q9NX24 153 aaKnown RBP7.15□□□□□ -1.26
SHMT2-220ENST00000555634 VPREB1P12018 145 aa7.14□□□□□ -1.27
SHMT2-220ENST00000555634 UBE2BP63146 152 aa7.14□□□□□ -1.27
SHMT2-220ENST00000555634 Q1RN00 199 aa7.14□□□□□ -1.27
SHMT2-220ENST00000555634 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
SHMT2-220ENST00000555634 MRPL55Q7Z7F7 128 aaKnown RBP7.14□□□□□ -1.27
SHMT2-220ENST00000555634 C7orf33Q8WU49 177 aa7.14□□□□□ -1.27
SHMT2-220ENST00000555634 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
SHMT2-220ENST00000555634 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
SHMT2-220ENST00000555634 A0A0B4J2C4 111 aa7.13□□□□□ -1.27
SHMT2-220ENST00000555634 TMEM126AQ9H061 195 aa7.13□□□□□ -1.27
SHMT2-220ENST00000555634 DNAH10Q8IVF4 4471 aa7.12□□□□□ -1.27
SHMT2-220ENST00000555634 A0A087WYN8 130 aa7.12□□□□□ -1.27
SHMT2-220ENST00000555634 FAM168BA1KXE4 195 aa7.12□□□□□ -1.27
SHMT2-220ENST00000555634 FXYD2P54710 66 aa7.12□□□□□ -1.27
SHMT2-220ENST00000555634 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
SHMT2-220ENST00000555634 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
SHMT2-220ENST00000555634 RPL13AP40429 203 aaKnown RBP7.11□□□□□ -1.27
SHMT2-220ENST00000555634 SERTAD4-AS1Q5TG53 156 aa7.11□□□□□ -1.27
SHMT2-220ENST00000555634 Q6ZSA8 131 aa7.11□□□□□ -1.27
SHMT2-220ENST00000555634 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
SHMT2-220ENST00000555634 PRO1854Q9UHT4 67 aa7.11□□□□□ -1.27
SHMT2-220ENST00000555634 C22orf24Q9Y442 160 aa7.11□□□□□ -1.27
SHMT2-220ENST00000555634 GAGE10A6NGK3 116 aa7.1□□□□□ -1.27
SHMT2-220ENST00000555634 FRAS1Q86XX4 4008 aa7.09□□□□□ -1.27
SHMT2-220ENST00000555634 TRAV23DV6A0A075B6W5 121 aa7.09□□□□□ -1.27
SHMT2-220ENST00000555634 PRYO14603 147 aa7.09□□□□□ -1.27
SHMT2-220ENST00000555634 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
SHMT2-220ENST00000555634 SCXQ7RTU7 201 aa7.09□□□□□ -1.27
SHMT2-220ENST00000555634 DNAH2Q9P225 4427 aa7.09□□□□□ -1.28
SHMT2-220ENST00000555634 IGKV2-28A0A075B6P5 120 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 H7C2G1 150 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 PANO1I0J062 215 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 IGKV2D-28P01615 120 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 CFC1P0CG37 223 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 LYRM7Q5U5X0 104 aa7.08□□□□□ -1.28
SHMT2-220ENST00000555634 TRBV10-3A0A0K0K1G6 114 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 COX6CP09669 75 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 PSMB2P49721 201 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 PRR3P79522 188 aaKnown RBP7.07□□□□□ -1.28
SHMT2-220ENST00000555634 VAMP3Q15836 100 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 COL5A1-AS1Q5SY13 56 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 LINC00337Q8N6G1 96 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 CIRBP-AS1Q8TBR5 109 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 DIRC1Q969H9 104 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 LINC00167Q96N53 147 aa7.07□□□□□ -1.28
SHMT2-220ENST00000555634 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
SHMT2-220ENST00000555634 RPL37AP8A6NKH3 93 aa7.06□□□□□ -1.28
SHMT2-220ENST00000555634 K7ERJ3 54 aa7.06□□□□□ -1.28
SHMT2-220ENST00000555634 SNCGO76070 127 aa7.06□□□□□ -1.28
SHMT2-220ENST00000555634 IGLV6-57P01721 117 aa7.06□□□□□ -1.28
SHMT2-220ENST00000555634 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
SHMT2-220ENST00000555634 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
SHMT2-220ENST00000555634 IGLV1-50A0A075B6I6 118 aa7.05□□□□□ -1.28
SHMT2-220ENST00000555634 ETDCA0A1B0GVM5 59 aa7.05□□□□□ -1.28
SHMT2-220ENST00000555634 REG3GQ6UW15 175 aa7.05□□□□□ -1.28
SHMT2-220ENST00000555634 Q8NDZ9 215 aa7.05□□□□□ -1.28
SHMT2-220ENST00000555634 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
SHMT2-220ENST00000555634 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
SHMT2-220ENST00000555634 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
SHMT2-220ENST00000555634 EPM2AB3EWF7 344 aa7.03□□□□□ -1.28
SHMT2-220ENST00000555634 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
SHMT2-220ENST00000555634 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
SHMT2-220ENST00000555634 SLC25A20O43772 301 aa7.02□□□□□ -1.29
SHMT2-220ENST00000555634 KRTAP7-1Q8IUC3 87 aa7.02□□□□□ -1.29
SHMT2-220ENST00000555634 SMIM11BQ8TCY0 68 aa7.02□□□□□ -1.29
SHMT2-220ENST00000555634 TSPAN13O95857 204 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms