RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 FAT1Q14517 4588 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 RPL24P83731 157 aaKnown RBP8.65□□□□□ -1.02
TUBB3-202ENST00000553656 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 TP73-AS1Q9UF72 201 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
TUBB3-202ENST00000553656 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
TUBB3-202ENST00000553656 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
TUBB3-202ENST00000553656 MRPL55Q7Z7F7 128 aaKnown RBP8.63□□□□□ -1.03
TUBB3-202ENST00000553656 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
TUBB3-202ENST00000553656 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
TUBB3-202ENST00000553656 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
TUBB3-202ENST00000553656 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
TUBB3-202ENST00000553656 VPREB1P12018 145 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 DAND5Q8N907 189 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 GAGE10A6NGK3 116 aa8.59□□□□□ -1.03
TUBB3-202ENST00000553656 TIMM17BO60830 172 aa8.59□□□□□ -1.03
TUBB3-202ENST00000553656 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
TUBB3-202ENST00000553656 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
TUBB3-202ENST00000553656 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
TUBB3-202ENST00000553656 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
TUBB3-202ENST00000553656 RPL37AP8A6NKH3 93 aa8.56□□□□□ -1.04
TUBB3-202ENST00000553656 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
TUBB3-202ENST00000553656 JOSD1Q15040 202 aaPredicted RBP8.56□□□□□ -1.04
TUBB3-202ENST00000553656 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
TUBB3-202ENST00000553656 M0R378 163 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 NCR3O14931 201 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 NPC2P61916 151 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 Q8NDZ9 215 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 LITAFQ99732 161 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 NDUFC2O95298 119 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
TUBB3-202ENST00000553656 S100A12P80511 92 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.05
TUBB3-202ENST00000553656 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 PAM16Q9Y3D7 125 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 TRBV10-2A0A0K0K1G8 114 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 Q6ZVH6 145 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
TUBB3-202ENST00000553656 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
TUBB3-202ENST00000553656 BCE1O60756 84 aa8.5□□□□□ -1.05
TUBB3-202ENST00000553656 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
TUBB3-202ENST00000553656 COX8AP10176 69 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 IFITM1P13164 125 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
TUBB3-202ENST00000553656 UBE2AP49459 152 aa8.48□□□□□ -1.05
TUBB3-202ENST00000553656 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
TUBB3-202ENST00000553656 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
TUBB3-202ENST00000553656 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
TUBB3-202ENST00000553656 TRBV10-3A0A0K0K1G6 114 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 PRYO14603 147 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
TUBB3-202ENST00000553656 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 DDTP30046 118 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 DLEU1O43261 78 aa8.46□□□□□ -1.06
TUBB3-202ENST00000553656 ZNF861PO60384 105 aa8.46□□□□□ -1.06
TUBB3-202ENST00000553656 C14orf144Q96I85 54 aa8.46□□□□□ -1.06
TUBB3-202ENST00000553656 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 CBY1Q9Y3M2 126 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 SLC25A34Q6PIV7 304 aa8.44□□□□□ -1.06
TUBB3-202ENST00000553656 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
TUBB3-202ENST00000553656 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
TUBB3-202ENST00000553656 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
TUBB3-202ENST00000553656 H0Y9J4 135 aa8.43□□□□□ -1.06
TUBB3-202ENST00000553656 OXTP01178 125 aa8.43□□□□□ -1.06
TUBB3-202ENST00000553656 ETDCA0A1B0GVM5 59 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 J3QL48 77 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 IGLV6-57P01721 117 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 PRLHP81277 87 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 HIST1H4GQ99525 98 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
TUBB3-202ENST00000553656 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms